Carassius gibelio (silver crucian carp): 127965133
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Entry
127965133 CDS
T08819
Name
(RefSeq) POU domain, class 2, transcription factor 1b isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127965133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127965133
03021 Transcription machinery [BR:
cgib03021
]
127965133
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
127965133
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
127965133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
127965133
NCBI-ProteinID:
XP_052421687
LinkDB
All DBs
Position
B9:20046598..20064436
Genome browser
AA seq
685 aa
AA seq
DB search
MADGGAASQDESSGPDSKMSNPSETSKCAMESGDENTGAQTNGLDFHRQTVQTTNAITNA
HAQALLQQLTLTPAQQQLLLQQAQAQLLAAAVQHSAGQQSSTTGASISASAATPITQIPL
SQPIQITPQLQQLQQQQNLNLQQFVLVQPGHHIATQLQPAQFIISQTPQGQQSLLQAQNL
LTQLPQSQANLLQTQPSITLATQPATPTRTIAATPIQSLPHSQTTPKHIDTPSLEEPSDL
EELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPL
LEKWLNDAVCAENQTADQALSSPSSLGSPGLGIEGLNRRRKKRTSIETNIRVALEKSFLE
QNPKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGSAISTPIKAIFSPTTP
LAPSTASLVTSNTLTSTSVSSVGFTGTSIGSASTNTASVISTAPVITTAASSPSLSPSPN
AVQTSSSEHTSVQEMVTAVSQAPSSLAATLGTGQVMVAGPSLSAALQGATQLPTSASIAA
MAAAAGLNPGLMASSQFTPGGAFLSLAPGGFGSALSPALMSNSTLASIQALASSGSLPIT
SVDGSGNFLFANTSAGSTPNLVTAPLFLNPQNLSLLASNPVSLVSAGGAAGAGALNLHIT
ADAHQSVVTTATMPASTITTASKAQ
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcaggaccagattctaaaatgagt
aatccatcggaaacaagtaaatgtgcaatggagagcggggatgaaaacactggtgcccaa
acaaatggactggactttcacaggcagactgtgcaaacaacaaacgcaatcaccaacgca
cacgcacaggccttgctccaacagttgactttgactccggcgcagcagcagttattgctg
cagcaggctcaggctcagctcttagcagcagcggtgcagcattcagccggccagcagagc
agcactacaggagccagcatctctgcctccgctgccacccccatcacccagatccccctc
tctcaacccatccagatcacacctcagttacagcagctgcaacagcagcagaacctcaac
ctgcagcagtttgtgctggtccagccgggccaccacatcgcaacacagctgcagcccgcg
cagttcatcatctcgcagacaccacagggtcagcagagtctcctacaggcccagaacctt
ctaactcaactacctcaaagccaagccaacctcctgcagacccagccaagcatcacactt
gccacacagcctgctacacccacacgcacgatagcagcgacccccatccaatcccttcct
cacagccagacgacaccaaagcacatcgacacacccagcctggaggagcccagcgacctg
gaggagctagagcagtttgccaagaccttcaaacagagacgcatcaaactgggcttcacg
cagggggatgttggccttgccatgggaaaactttatggaaatgacttcagccaaaccacc
atttctcgctttgaggccttgaacctgagctttaaaaacatgtgcaaactgaagcctctg
cttgaaaaatggcttaatgatgcagtttgtgcagagaaccagacggctgaccaggccctg
tccagtcccagctctcttggctcacctgggctgggcatagaaggcttgaaccgccgccgc
aagaagaggaccagcattgagaccaacatcagagtggccttagagaagagctttctggag
cagaatccaaaacctacctctgaggagatcaccatgatcgcggaccagctcaacatggag
aaagaggtgatccgagtgtggttctgtaaccgcagacagaaagagaagaggatcaaccca
cccagcagtggcagtgccatcagcactcctatcaaagcaatcttctctcccaccacacct
ctggcaccgagtacagcaagtcttgtgaccagtaacactctcaccagcactagtgtctcc
agcgtcggtttcactggcacaagtattggctcggctagcactaacactgcatcagtcatc
tccactgcacccgtgatcaccaccgcagcatcctctccttcgctcagcccttctcccaac
gcagtgcagacgtcctcctccgagcacacttcagttcaggagatggtgacggcagtaagt
caggcgccttcctccctggcggcaactctgggcactgggcaggtgatggtggctgggccc
agcctttcagcggcactgcaaggagccacccagctgcccaccagcgccagcatcgctgcc
atggctgcagccgcaggcctcaatcctgggctcatggcgtcttcgcagttcactcctggc
ggggcttttctaagtttggcaccgggtggttttggaagcgctttgagtccagcactgatg
agcaacagcaccttggcctcaatccaagcactggcatctagtggcagtctgcccattacg
tctgtggatgggagcgggaactttctgtttgccaacaccagcgccggcagcacccctaac
ctcgtgacggctccgctctttctgaaccctcagaacttgtcactgctcgccagtaacccg
gtcagcctggtgtctgcaggaggggccgcgggggccggagccctcaacctgcacatcacc
gccgatgcccaccagagcgttgtcactacagcaactatgcccgcctccaccatcaccacg
gcctctaaggcccagtga
DBGET
integrated database retrieval system
