KEGG   Carassius gibelio (silver crucian carp): 127965192
Entry
127965192         CDS       T08819                                 
Name
(RefSeq) LOW QUALITY PROTEIN: protein mono-ADP-ribosyltransferase PARP4-like
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03410  Base excision repair
cgib04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    127965192
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    127965192
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cgib03400]
    127965192
DNA repair and recombination proteins [BR:cgib03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     127965192
SSDB
Motif
Pfam: VIT PARP VWA_3 VIT_2 VWA BRCT VWA_2 BRCT_2 VWA_CoxE DUF6473
Other DBs
NCBI-GeneID: 127965192
NCBI-ProteinID: XP_052421813
LinkDB
Position
B9:complement(17846226..17858810)
AA seq 1552 aa
MTVFENCTVVLDVKNLPFKEKNKLRLALLENGGNISYVINKECSFVVTSSVKDLSGNRRR
SIQKLQIPVVGTQYVWSCLDQGLLLSLTEHNLTPELQYPGSEFLPPSGKEKFKGHPELPK
TEAEILQKSGPRPGRFRVYKEGDHDLPEFPSYFQVAKYSVFERVNPKTLSVLELQSAKGR
AGQQYRVLCSVLREAESAVVQDKLVFCVTSEDAVEAYLQLMKEMETEGFTKTHTLSPEVE
RLASYSLQQLLLEEKLNCSTVSQEVGVFVELVWTEALGSLYNILTVPVSRISLNDVSRVE
GLLLQAQKTEKEDEVKALLEEVNTLLPLRMIDPPSKHKLVSQKLDLCQLIRDIVNVSEAT
LGSPSSSSLGKYRALRCSIEVVPPQNPEFHVVSQLLQDRPFQIQQILRVNRGVELQMFLE
DLGNIKPLLHSTSPSSFVGILSRGLLLPRVGVEQHGIERTDIGNLGGGIYFSDSLKTSVK
YSKPSVTDGSRLLLVCEVALGRCKDLLKKDSTLTCAPDGYHSVHGVQRSPNRLSEFEDDE
FVVYNTEQIRLKYVIQYSLDGDELKEFLPQINTQLTQLTDTTPDFLPGDDSEDLESIKNP
LEEMNAGLLDSSGQKLPLQAVNVRCKLMDLLCQVIIFQTYTNQSAAPIEAKYVFPLEETA
AVCGFEAFINGKHVIGKVKEKEQARKEYRQAIEKGHGAYLMDQDAPDVFTISVGNLPPGA
TVLIKVTFITELLVRSGSIVFSLSGSVAPWEQRAALYQTTQATVEKIGVTELHSEGEFSL
SMSIEMPYEIINLSSSHRIKTKRTDCKAVISTLPGQTLGSEGLQVSFGLSNIHMPRMWVE
NHPDKDSQACMLVFYPDFKSSVVSGSGAPSNVSDVVILLDSSKSMQGDAMLNARRSALHV
LRSLDRSLKINIISFSTDYREAFPAPVGLDEASEAARNFIMSCGGSGGGTDLWRPLRSLS
LLPPSRGVRNILLLSDGHVQNQPLTLQLVRENSCHTRLFTCGLSLTANRHMLRALAQAGG
GTYEFFDTKMKHTWTEKVRAQVRRMDSPGCRSVAVKWQQFNPTASRPVQAPSQLHALFTD
CHTLVYGFVPHCTQATLFGDLSGQEIKTMVSATELQKTKGTFLHKLTARAIIRDYEDGIL
ANSEAEHEEKKAELKSYIIELSKEFSILSHFTSFVAIEERKQNELDIGFTDIPKIISEED
VDILPYMGWTEENLKAVHISHSLDSQTGTTNVADPVDGIGSFSIRSLHQELMEPLSLIDS
HLIYPAAHFLSSEPPHSYLSRSESGQYMDYGLVSQKEITPIISPKSSTFSCPTENYTELD
TSSHALFTDPPHSFLLKCQPCFCISLSPPVSRRMSTYFSKRQWAGNPIVFNHPVLSATPS
LPESGGFGRKLISRPVAWNELFELQHEDGYWECTDRLSRFLNLDVDFFTNVFLQEKGIRS
FGVKAHAAILRLVATLLVLQLIRVEQLEVGRLLESLLRLKESQEPRPMYWEAVKRAVEWA
CRTDRQYPCVCSRLEIGWDWESSTRQLLGCDPPHPYSPLKPVLERRRDVSVM
NT seq 4659 nt   +upstreamnt  +downstreamnt
atgacagtgtttgagaactgtactgtggtgttagatgtgaagaacctgccttttaaagag
aagaataaactgagattagctcttctggagaatggaggaaacatctcatatgtcatcaat
aaagagtgctcttttgtagtcactagcagtgtgaaggatctgagcggtaaccggcggcgc
agcatccagaagctgcagatcccagtggtcgggacgcagtatgtgtggagctgtctggat
caagggcttctcctgtcattgacggagcataatttgaccccagagctgcaataccccggc
tctgaattcctccctccttcaggaaaagagaagttcaaaggtcaccctgaactcccaaag
actgaagctgagattcttcagaagagtggaccccgtcctggaaggttcagagtttacaaa
gaaggcgaccatgacctgcctgaatttccttcgtattttcaagtggccaagtattcagtt
tttgagagggttaatcccaagactttgtctgttctggagctgcagagtgccaaaggccga
gcaggccagcagtatcgtgtgttgtgttcagtcttgcgtgaagctgagtccgcagtggtt
caggacaagcttgtgttctgcgtaacgtctgaagatgctgtggaagcgtatctacagctg
atgaaggagatggaaacagagggattcacaaagacacacacactttccccggaagttgag
cgcttggcatcctacagcctgcagcagctgctgttggaggagaagctgaactgcagcact
gtgtcacaggaagttggtgtctttgtggagctggtttggactgaagctctcggttccctt
tataacatcctaacagtccctgtctccagaatcagcctcaatgatgtgagcagggtggag
ggattgttactgcaggcacaaaagactgagaaagaggatgaagtcaaagccctgctggag
gaggtcaacactcttctgcccctcagaatgatcgaccctccttccaaacacaagcttgtg
tctcagaaactggacctttgtcagctgatcagagatattgtaaatgtgagtgaggccact
ctgggaagcccctcatcgtcgtctctggggaagtatcgggctctgaggtgcagcattgag
gttgttccaccacaaaaccctgagtttcatgttgtctctcaactgcttcaggacaggcct
ttccagattcagcagatactgcgtgtcaacagaggagtggagcttcagatgtttttggag
gatttaggcaacattaaacccctcctccactccactagtcccagcagttttgttggaata
ctgtcacgaggtctgctgctgcccagggttggagtcgaacagcatggaattgagagaacg
gatatcgggaatctcggaggaggaatctacttcagtgactctctgaagactagtgtgaaa
tactccaagcccagtgtgactgacggctctcggctgctgttggtgtgtgaagtggcattg
ggtcggtgtaaggacctgctgaagaaagacagcactttgacttgtgctcctgacggttac
cacagtgtacacggagtccaacgctctccaaacagactctctgaatttgaggatgatgag
ttcgtcgtctataacacagagcagatcagactgaagtatgtgatacagtacagtctggac
ggagacgagttaaaagagttcctgcctcaaatcaacactcagctcacacagctcaccgac
acaacacctgatttcttgcccggtgatgacagtgaggatttggagtccattaagaatcct
ctggaggagatgaacgcaggtttgctggacagcagtggtcagaaacttcctctacaggct
gtcaatgtgaggtgcaagctgatggacctgctgtgtcaggtcatcatattccagacctac
acaaaccagagtgctgctcccattgaagcaaagtatgtctttccactggaagagacggca
gcggtgtgtggatttgaagcctttatcaatggaaaacatgtcattggaaaggtaaaggaa
aaagagcaggctcgtaaggagtacaggcaagccatagagaaaggccatggagcgtacctg
atggaccaggatgcacctgatgtatttaccatcagtgtggggaatcttcctcctggagcc
acagttttgatcaaggtgacgttcatcactgagctgctcgtcagatcaggctctatagtc
ttctcactgtccggcagcgtggcaccatgggaacagagagccgccctttatcagacaact
caggccactgttgaaaagattggtgtgacagagcttcattcagaaggggagttttctctg
tctatgtccattgaaatgccttatgagatcatcaacttaagctcttcacaccgcatcaaa
accaagaggacagactgtaaggcagtgatcagcacgttaccgggacagacactgggatct
gaagggctacaggtgtccttcggtctttctaatatccacatgcccagaatgtgggtcgag
aaccatccagataaagatagtcaggcctgtatgctggtgttttatccagactttaagtca
agcgtggtgtccggctctggagctccatctaatgtgagcgatgtggtcattctactggac
tcctccaagtccatgcagggagacgccatgctgaacgcccgtaggagtgcccttcatgtc
ctcagatctctggaccgctcactgaagatcaacatcatctctttcagcactgattacagg
gaagcttttcctgcaccagtgggtttagatgaagcatctgaagcagccaggaattttatt
atgtcgtgtggcggctctggtggcggcactgatctgtggcggcctctccggagtctgagt
ctgctgcctccctcccggggcgtgaggaacatcctgctgctctctgatggacatgttcag
aaccagcctctgaccctacagctggtccgagaaaactcctgccacacgcgcctcttcacc
tgcggactcagcttgacagctaatcgtcatatgctcagagctttggctcaggcaggtgga
ggaacatatgagttttttgacacaaagatgaaacacacttggacagagaaggtgcgggct
caggttcggcgtatggattctccaggctgcagatcagtggcagtgaagtggcagcagttt
aatcccacagcgtcccgtcctgttcaagccccctcacagcttcacgctctcttcactgac
tgtcacactctcgtttacggatttgtgccacactgcactcaggccacactgtttggtgat
ttgagtggacaagagatcaaaacaatggtttccgccacagaactgcaaaagacaaaggga
acttttcttcacaagttaacagcaagagcgattatcagagactatgaagatggcattcta
gctaacagtgaggcagaacacgaggagaagaaagcagagctgaagtcctacatcattgag
ctcagtaaagagttctccatcttgtcccatttcacaagctttgtcgccattgaagagagg
aagcagaatgagcttgacatcggattcacagatattcctaaaatcatatcggaggaggat
gtggatattttgccatatatgggctggactgaagagaacctgaaggctgtgcatattagt
cacagccttgattcccagacaggcacgactaacgtagctgacccggtggatggtattggt
tcttttagcattcgtagtctccatcaagagttaatggaacctctttccttgattgatagt
catctcatttaccctgctgcccattttttgtcctcagagcctcctcactcttatcttagt
agatctgaatcagggcaatacatggactacggacttgtttcccagaaagaaatcactcca
ataatttccccgaagagttctaccttttcctgtcccacagagaactacactgagcttgac
acctcaagtcatgctctctttacagatcctcctcattcttttcttctcaaatgtcagcca
tgcttttgcatttctttaagtcctcctgtttctcgcaggatgagtacatatttttccaag
aggcaatgggctggtaaccccattgtcttcaatcaccctgtgttgtctgcaacaccctct
ctccctgaatctggtggctttggtagaaaactgataagcagaccagtggcctggaatgag
ctgtttgaacttcagcatgaggatggatactgggagtgcactgacaggctgagcaggttc
ctcaacctggacgtggactttttcacaaatgtcttccttcaggagaaaggcatccgttct
tttggtgtgaaggctcatgctgcaattctgaggctggtagcgactctgctggtattgcag
ctgatccgggtggagcagctggaagtgggacggctgctcgagtctctcctccgactaaaa
gagtcccaggagcccagaccgatgtactgggaggcagtgaagagggccgtggagtgggcc
tgtcggacagacagacagtatccgtgtgtgtgcagcaggctggagatcggctgggattgg
gaatcatctactcgtcaactactgggctgtgatcctccacacccatattcccctctcaaa
ccagtcctggagaggcgtagggatgtatcagtcatgtag

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