Carassius gibelio (silver crucian carp): 127965207
Help
Entry
127965207 CDS
T08819
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127965207
Membrane trafficking [BR:
cgib04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
127965207
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
127965207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_VPS8
Lgl_C
Synaptobrevin
Beta-prop_EML
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
127965207
NCBI-ProteinID:
XP_052421834
LinkDB
All DBs
Position
B9:13887882..14025218
Genome browser
AA seq
1267 aa
AA seq
DB search
MKKFRKVLDGLTTSSPVNQGGSPVCGSAAGTPSTALTPRELEIQETLMSEHFQICKTVRH
GFPYQPTALAFDPVQKILAIGTRSGGVRLLGRPGVDCHCQHESGAAVLQLQFLINEGALV
TACADDTLHLWNLRQRRPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNIESF
VLSGYVIMWNKAIELSTKTHPGPVVHLSDSPKDEGKLLIGFESGTIVMWDLRAKRADFRI
YYDEAIHSVSWHHEGRQFMCSHSDGSLSMWNLRNTAKPFQVTFPHGKTQRDGRKESCKPI
LKVEYKTSRNSSDAFIVFSGGLSYDKAGRRPTLTIMHGKAITVLEMDYPIVDFLVLCDTP
YLNEVQEPYAVAVLLEKDFVVVDLSQSNFPIFENPYPMDIHESPVTCTAYFADCPPDIIP
VLYSIGAKHKKTSYSHKEWPLRGGTWTVGSQTYPEIIITGHADGSIKFWDATAITLQMLY
KLKTSKVFEKPKSGDVGRSAELVEEDPYAIQMINWCPQSRIFCVVGISAHVILYRFSKHD
ANTTITSLEVRLQCEMEDVISPSDTENTPCFSDPSGLSPQPQPPSPRSNTPDSVRDSIPC
LKVKDRTIRMPPGYQAELVVQLLWVDGEPPQQITSLDLNSAYGLLALGNCNGLAVVDYLQ
KTILLCMNTLELYGSADPFQRLTRSPRKNRQSTSDFCMRGLSNFYSDSKKRIRTSYQSLT
ELSDNQVSLDLERSKSPTSAPYTPSLHNDPRGTGEPVSNLRSCHYSPVFYLLDNVKGPGR
KLSLPTDLKTDLDHVNGHCTSPTSQPCPTGRARVPGGTEGPRLARRGPGRPPFRKAQSAA
CMEVSLPVSSLTEGYPSRRAMLQQLHGVSMYSHDEHHITTYSWSERESRENSFSRSRSSS
VSSIDRETKEAVTTLQFAESYGRKSDTLPTPCLWVGTSLGLVLIIPMSIPTDEQERQEDP
VTVAPTGTVLMLKSSVLRFAFLDCGGALINSPYEVWRDQHVPDVPDRPRKRKLVNFSPSS
SQEASGDGHLAVVCSERQAKVFFMPSQACLYVHNITESSFVLRADVVSVCNSVCLACFCA
NGHIMTLSLPSLRPLLDVNYLPLTDMRIARTFCFTNGGQALYLCSPTEMQRITYSQEMCD
NLQEMLGELFTPIETPEAQNRGFLKGFFGGNTQNFDREELFGEAAAGKASRSLAQHIPGQ
GGLEGMKAAAGGVVGELARARIALDERGQRLGELEERTALMMSSADTFSKHAHELMLKCK
DKKWYQF
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttccggaaggttttggacgggttgacgacttcttcacctgtcaatcaaggt
ggatctcccgtgtgcggcagtgcggctgggacccccagtacggctctgacgccgcgggag
ctggaaatccaggagacactgatgtctgagcacttccaaatctgtaagacggtgcgtcat
ggatttccctatcagcccacagctctggcatttgacccggtgcaaaagatccttgccatt
ggcactcgttctggaggagtacggcttctgggacggccaggagtggactgtcattgccag
catgagagtggggcggcagttctccaactgcagtttctcatcaacgagggagcgctggtc
acagcttgtgctgacgacacgcttcatctctggaatttgagacagcgacgtccggctatc
ctacactctctcaaattcaacagagagcggatcacattttgtcatcttccgtttcaaagt
aagtggctttacgtggggacagagcgtggaaatacacacatagtgaacatcgaatccttc
gttttgtctggatatgtcatcatgtggaacaaggccatagaactatcaacaaagacacat
ccaggtcctgttgttcatctgagtgacagtccaaaagatgagggaaagttgctgataggt
ttcgagagtggtacaatagtaatgtgggacttgagggccaaaagagctgacttcaggata
tactatgatgaggccattcactcagtaagctggcatcacgaggggcggcagttcatgtgc
agtcattctgacggcagtctgagcatgtggaatctgagaaacacagccaaaccttttcaa
gtcaccttccctcatggcaagactcagagagatggtcgaaaagaatcatgtaaacccatt
ctcaaggtcgaatacaaaacctccagaaacagtagtgatgcatttattgtcttctccggg
ggtctttcgtatgacaaggcaggacggagaccaaccctaaccatcatgcatggcaaagcc
atcacagtgttagagatggactatccaatagtggacttcctagtgctctgtgatacgcct
tatctcaacgaggtccaggagccatatgcggtggcggttctgctggagaaagattttgtt
gtggttgatctatcccagagcaattttcctatctttgagaacccctaccccatggacatc
catgagtctccggtcacatgcacggcttactttgccgactgtccccccgacatcataccc
gtgctttactccataggagctaaacacaaaaagaccagctacagccacaaggagtggccg
ctcagaggtggcacatggacggtgggttcacaaacatacccagagataatcatcacagga
catgcagacggatcaataaagttttgggatgccacggcgatcacactgcagatgttgtat
aagctcaagacgtcaaaggtgtttgagaagcctaagagtggagatgtgggacgaagcgct
gagcttgtggaggaagacccctatgccattcagatgatcaactggtgcccgcagagccgt
atcttttgtgtagtcggcatcagcgcccacgtcatcctgtaccgcttcagcaaacatgac
gccaacaccaccatcacgtccctagaagtgcgacttcagtgtgagatggaggatgtcatc
tctccatcggatacagagaacactccatgtttttcggaccccagcggtctctcacctcaa
cctcagcctccaagtccccgcagcaacaccccagacagtgtgcgggacagcatcccttgc
ctcaaggttaaagatcggacgatcagaatgcctcctgggtaccaggcggagctggtggtt
cagttattatgggtcgatggagaaccgccacaacaaatcaccagcttggatttaaactct
gcatacggactgttggctctaggtaactgcaatggtttggcagtggtggactacctgcag
aaaaccattctgctgtgtatgaacaccctggagctttacggatccgcagaccctttccag
cgactaacacgctctcctcgcaaaaaccgacagtccacatcagacttttgcatgcgcggc
ctgtctaacttttattccgattcaaagaaacggatccgtacttcctaccagagccttaca
gagctttctgataatcaggtgtctttggacctagagaggagcaagtcacccacctcagca
ccctacaccccttccctccataatgaccctcgaggcacaggggaacctgtgtccaacctc
cgatcctgccactacagtcctgtcttttacctgttggacaatgtcaagggaccaggcaga
aagttaagtctaccaacagatcttaagactgatcttgatcatgtgaatggacattgcact
agcccgacctcccagccgtgtccaactgggagggccagagtcccggggggcactgaaggg
ccacgccttgcccgcagggggcctggtcgaccgcccttccgcaaggcccagtccgccgca
tgcatggaggtctctttgcctgtgtcctccctcaccgaaggttatccatcccgacgagcc
atgctgcagcagttacatggagtcagtatgtactctcatgatgaacatcacatcaccacc
tactcctggagtgagagagagagtcgagaaaactcattcagccggtcacggagctctagc
gtttccagcatagaccgagagactaaagaggctgtaaccaccctgcagtttgcagagtcg
tacggacgtaagtcagacaccctgcctacaccatgcttgtgggtgggtacgagtctgggc
ctggtgctcatcatcccaatgtccattcctacggatgagcaggaacgccaggaagacccc
gttactgtggcccccactggcacagtgttaatgctgaagagctctgttctgcggtttgct
tttctggactgtggaggtgctcttatcaacagtccctacgaggtgtggcgagaccaacat
gtccctgatgtcccagatcgaccccgcaagcggaaactggtcaacttctcaccctcgtct
tctcaagaggccagtggagatggtcacttagctgtagtgtgttcagagaggcaggccaag
gtcttcttcatgccctcccaggcctgtctatatgtgcataacatcactgagtcatccttc
gtgctgcgggctgacgtggtgtcagtttgtaacagcgtttgtttggcctgcttctgcgcc
aatggacacataatgactttgagccttcccagtttacggcctctgctagatgtcaactac
ctgccgctaacagacatgcgcattgctagaacattctgcttcaccaacggagggcaggca
ctgtatctgtgctcccccacagagatgcagagaatcacttacagccaggagatgtgtgac
aacctacaggagatgttaggggagctctttacacccatcgagacccctgaggctcagaac
cgtggctttctcaagggcttttttggcggcaatacccaaaacttcgaccgagaggagctt
tttggcgaggcagcggcaggtaaggcgtcccgcagcctggcacagcacatcccaggacag
ggcggactggagggcatgaaggcagcagcaggcggggtggtgggagaactggcccgagct
cgcattgccctggacgagagaggacagaggctgggggagctggaggagaggaccgccctg
atgatgagcagtgctgacaccttctctaaacacgctcacgagctgatgctgaaatgcaaa
gacaagaagtggtatcagttttag
DBGET
integrated database retrieval system
