Carassius gibelio (silver crucian carp): 127965214
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Entry
127965214 CDS
T08819
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127965214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgib03021
]
127965214
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
127965214
Prokaryotic type
Archaeal type
TFE
127965214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
127965214
NCBI-ProteinID:
XP_052421850
LinkDB
All DBs
Position
B9:13838350..13856898
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AA seq
449 aa
AA seq
DB search
MTEPELLTEVPASLKRLAKQVVRGFYGIEHALALDVLIRNPCVREEDMLELLKFDRKQLR
SVLNTLKADKFVKCRMRVETAPDGKTTRHNYYFINYRLLVNVVKYKLDHMRRRIETDERD
STNRASFRCPCCMNTFTDLEANQLFDPMTGTFRCTFCQTEVEEDESAVPKKDARTLVARF
NEQIEPIYVLLRETEDINLSHDLLEPEPSEIPALKQSRERAAQNAGGAGAGAPGREVWKN
KGSSYDLYSQDVVISMEDQEPQPGQTTEGKAPKERPIWLTESTVQGAYNETDALKQPGED
SVLTQEGMTGRGAAQDENEEVMLALLIHEKRSGAGPGGAVVSRPTVPAANASDSDSDTSE
SDEDSLPQAPVHTMRNATALRPGKQEDEEDEDDDDEFEEVGDDPVVMVGGRPFSYREVSQ
RPELVEQMSAQEKEAYIEMGQNLFQDMYF
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaccagagctgctcacggaggtccctgcgtctctgaaacggctggccaagcag
gttgtgcgaggtttctatggcatcgagcatgctctcgctctggatgtgctgatcaggaac
ccctgcgtacgtgaagaggacatgctggagctgctcaagttcgaccgcaagcagctgcgt
tcggttctgaacacactcaaagctgacaagtttgtcaaatgtcgtatgcgcgtggagacg
gcacctgacggaaagacgacaagacacaattactatttcattaactaccggctactggtt
aatgtggtgaagtacaagctggaccacatgcgcagacgcattgagacagatgaacgggac
tcgactaacagagcatccttccgctgcccctgctgcatgaacacattcactgaccttgag
gccaaccagctgtttgaccccatgaccggaaccttccgctgtaccttctgtcaaacagaa
gtagaggaggacgaatcggccgtgccaaagaaagacgcccgcactttggtggcgcgattc
aacgagcagatcgaacccatctatgtactgctacgagagacggaggacattaacttgtca
catgatcttctggagcccgaaccgtcagaaatcccagccctaaaacaaagtcgggagcgg
gccgcccagaacgcaggaggagctggtgcaggggcacctggtcgggaagtatggaaaaac
aaaggctcatcgtatgacctctactcgcaggatgtggtcatcagcatggaagaccaggag
cctcagcctggccagactaccgagggaaaggcccccaaagagaggcccatatggctgacg
gaaagcacagtgcagggggcgtacaacgagacagatgctctgaagcaacctggcgaggac
tctgtattaacccaggagggaatgactggacgtggagctgcacaggatgagaacgaggag
gtgatgctggctctcctcattcacgagaagaggagcggagctggtccaggaggtgctgtc
gtctccagaccgaccgttccagcggctaacgccagcgactctgacagcgataccagtgaa
tcggatgaagactcactgcctcaggctccagtccacactatgcgcaacgctacagccctg
cggccaggaaaacaagaggatgaggaggacgaagatgatgatgatgagtttgaggaggtc
ggggacgaccctgtagttatggtggggggaagacctttctcttacagggaagtgagccag
agacccgagctggtggaacagatgagtgctcaggagaaagaggcgtacattgagatgggc
cagaacctcttccaggacatgtacttctga
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