Carassius gibelio (silver crucian carp): 127965221
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Entry
127965221 CDS
T08819
Name
(RefSeq) TBC1 domain family member 4-like isoform X1
KO
K17902
TBC1 domain family member 4
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127965221
Membrane trafficking [BR:
cgib04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
127965221
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
127965221
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
127965221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
DUF4249
IRS
DUF4806
Motif
Other DBs
NCBI-GeneID:
127965221
NCBI-ProteinID:
XP_052421860
LinkDB
All DBs
Position
B9:17880369..17911696
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AA seq
1235 aa
AA seq
DB search
MEGQDGKGNNDSNQKADKRFALWYMGWSSLDRRTTLPMLPWLLAEIRRKSEKNESGPAQA
REVQLYLSPPLIRCVPANSSNPSVFIFEHKAQFISRFIHNSNDLSYFAYLIRSQPDNPES
EMACHVFKACDPNQVPEVISSIRQVSKAALKEESKPKQESDESFYNSQKFEVLYCGKVTV
NHKKAPSTLIDDCIDKFRQHEIERKRLRLLNGQRSSTEAPVDFIVGDNPLSSSLCKVDEP
EPNLNEEELSEVGNGILHMTSSSSTGSLLGSFDCILEDSGFGEQQEIRTRCNSLAGGLQK
RTRELGKGSTRRRHASAPNNVQPSDADKNRTMLFQVGRFEVNLISPDTKSVVLEKNFKDI
SSCSQGVKQTDHFGFICRDVVESGPAQYVCYVFQCASESLVDEVMLTLKQAFTTAAALQS
SKNQIKLCEACPMHDLHKLCERIEGLYPPRAKLAIQKYLSQLTDNEQVNIFERVQKMKPA
SDHEENELVILHLRQLCETKQKSHVHIGEVPQQNASGSTVTSDNSIVGRNKLDVLKNKAR
SSLTSSLENILSRGASRMRMRLGSMGSFDRQGDSPGDSPPGTPPSYIEEDPDAPQFRRRA
HTFSHPPIKKKISFTEVSSQACKAPLRRQQSLAPELLQNSTVGYTRVRSVSESESYFSRS
SSFHTPTFLKTFYQSSLLSDSGSLKSGNGEGRKRSLSGCSTDSLTLVPPRRVSWRQKIFL
RVASPMNKPCASMQHVDHMDGWELLPLSPRALNQDQDPQVSPLSLEQGRRSPADYRALWK
KAIHQQILLIRMEKENQRLEASRDELHIRKMKLDYQEVCPCSKEVQALWDRKLSSPCRTK
VQWDKEEIHSAVCQGVPKSRRGEVWLLLSQQYRLHHRLPQRQQPPETPYQDLLKQLTAQQ
HSILVDLGRTFPTHQYFSAQLGAGQLSLYNLLKAYSLLDTEVGYCQGISFVAGLLLLHMS
EEQAFDTLKFLMYDLSIRRQYRPDMISLQIQMYQLSRLLHDYHRNLYTHLEEHEICPSLY
AAPWFLTLFASQFPLGFVARIFDLLFVQGTEVIFKVALCLLSSHEGEILECDCFESIVDY
LKSTIPTLTHSQMEEMITQAIEMDISKQLHAYEVEYHVLQDELADAPPPLEDSDRLDKLE
KANAQLKKQNMDLLEKLQSARLKIQTLESSVESFLSRESKMKHLIRSLEQEKASYQKTIE
RMRSSLTSDAMTDVEMTQLKSSTNGKAKETACKKP
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atggagggacaggatggcaaagggaataatgacagtaatcaaaaggcagacaaaaggttt
gctctctggtacatgggctggtcgtctctggacaggcggaccacgctgcccatgctgccc
tggctgctggcggagatccggaggaaaagtgagaagaacgagtccggtcccgcacaggcc
agagaagttcagctgtatctctcgcctcctctgatccgctgtgtgccagctaacagcagc
aacccctccgtcttcatattcgagcataaagcgcagtttatctccagatttatccacaat
agcaatgacttgtcttattttgcctaccttatcagaagtcaacccgataaccccgagtct
gagatggcatgccatgtgttcaaggcatgtgatccaaaccaggtgcctgaggttattagc
agcattagacaggtgtccaaggctgctcttaaggaggaaagcaagcccaagcaagagagt
gacgagtctttctacaactcccagaaattcgaagtgctttactgtggaaaagtgacagtc
aaccacaagaaagccccttccactctgattgatgactgcattgacaaattccgccaacac
gagattgaacgtaagcgtctgcggctcctcaatggccagcggagctctaccgaggccccc
gtggacttcattgtgggtgacaaccctctaagttcctctctttgtaaagttgatgaacct
gagcccaatctaaatgaggaagaactgtctgaggtgggcaatgggattctgcacatgact
agctcatccagtacgggcagcctactggggtcctttgactgtatcttggaggactcaggt
tttggagagcagcaggagattcgcacacgctgtaatagcctggcgggcggcctacagaaa
aggaccagagagttgggcaaggggtcgacacgtaggagacacgctagcgcgcccaataac
gtgcagccgtctgatgctgacaagaatcgtacaatgctattccaggttggacggtttgaa
gtgaatctcatcagccctgacactaaatctgtggttctggagaagaatttcaaggacatc
tcgtcctgttcacagggtgtcaaacagacagatcactttggctttatttgtcgggacgtg
gtggagtctggcccagctcagtatgtgtgttacgtgttccagtgtgctagtgagtctctg
gtggatgaagtaatgctcaccctgaaacaagcctttaccacagcagcagctctgcagagc
tccaagaaccaaatcaaactgtgcgaagcttgtccaatgcatgacttgcacaagctctgt
gagaggatagaaggtttgtatcctcccagggcgaaactagccattcagaagtacctgtcc
caactgaccgacaacgagcaggtcaatatattcgagcgggtgcagaaaatgaagccagcg
tctgatcatgaagaaaacgagctcgtgattcttcacctccgacagctgtgcgagaccaag
cagaagtctcatgttcatattggagaggtcccacagcagaatgcttctggcagcaccgtg
acctctgataactccattgtgggccgtaataaactggacgtgttgaagaacaaagcccgg
agttctctgacaagctccctggagaacatcctctcaaggggggccagccgtatgcgaatg
cgtcttggcagcatgggaagttttgaccgccagggcgactcacctggtgactccccacct
ggaactccacccagttacattgaggaggacccagatgccccgcagttccgtcgccgggca
cacaccttcagccaccctcccatcaagaagaaaatctccttcactgaggtttcctcccag
gcctgtaaagctccgctgcgccgacagcaatctttggcccctgagctgctgcagaacagc
accgttggttacacgagagtgcgcagtgtctctgagagcgagtcctacttcagtcgctca
tcctccttccacacccccactttcctgaaaaccttttaccagagctccctcctgtcggac
agcgggagtcttaagagtggtaatggagagggcaggaagaggtctctgtcaggctgtagc
accgattctttgaccttggtgcctccacgcagagtttcttggcgccagaagatcttccta
agggtggcgtcacccatgaacaaaccctgtgcctctatgcaacacgtggaccacatggat
ggctgggagctgctgccactttctcctcgggctttgaaccaggatcaagatcctcaggtc
agccccctgtccctagagcagggccggcgcagtccagctgactacagggccctgtggaag
aaagccatccaccaacagatattgctcatccgcatggagaaagagaaccagcgcctggag
gccagccgtgatgaattgcacattcgtaaaatgaagctggactaccaggaagtgtgtcca
tgctcaaaagaggtgcaggccctttgggacaggaagttgagtagtccctgccgcactaaa
gtacagtgggacaaagaagagatccacagtgctgtatgtcaaggtgtccccaaaagtcgg
cgaggtgaagtgtggctcctgctctctcagcagtatcgtttgcatcaccgtctgccgcag
cggcagcagccccctgaaaccccttatcaggatctcctcaaacagctcacagcacagcaa
cactccatcctggtcgacctcggccggacattcccaacacaccagtatttcagcgctcag
ctgggagctggacagctatctctgtacaatctcctgaaggcctactccctgctggacacg
gaggtgggctactgccaggggatcagttttgtggccggcttgctgcttttgcacatgagc
gaggaacaggcattcgacactctcaagttcctcatgtacgacctgagcattcgccgacag
taccgtcccgacatgatctctctgcagatccagatgtaccagctgtcccgactgttgcac
gactatcaccgtaacctgtacactcacctggaggagcacgagatctgtcccagcctgtac
gccgcaccctggtttctcactctcttcgcctctcagttcccgctcggctttgttgcccga
atatttgacctcctgtttgtccaaggcacggaggtgatttttaaggtggccctgtgtttg
ctgagcagccacgagggagagatactggagtgtgactgctttgaaagtattgtggactac
cttaaatccaccatccccaccctcactcatagccaaatggaagagatgatcactcaggca
atcgagatggacatctccaagcagctgcatgcgtatgaagtggagtaccacgtcctgcag
gatgagctggcagatgctcctccacctttagaggactccgataggctagataaactggag
aaagctaatgcccagctcaagaaacagaacatggacttactagagaaactgcagtcggct
cgtttgaagattcagacgttggagagcagcgtagagagcttcctttcacgcgagagcaag
atgaagcacctgatccgttctctggaacaagagaaagcttcctaccaaaagaccattgag
cgcatgcgtagcagtttgacatcggatgccatgactgatgtggagatgacccaactcaag
tccagcaccaacgggaaagccaaagaaactgcctgcaaaaagccttga
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