KEGG   Carassius gibelio (silver crucian carp): 127965838
Entry
127965838         CDS       T08819                                 
Name
(RefSeq) F-box and WD repeat domain-containing 11-B-like isoform X1
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib04114  Oocyte meiosis
cgib04120  Ubiquitin mediated proteolysis
cgib04218  Cellular senescence
cgib04310  Wnt signaling pathway
cgib04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    127965838
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    127965838
   04340 Hedgehog signaling pathway
    127965838
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    127965838
   04218 Cellular senescence
    127965838
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cgib04121]
    127965838
   03036 Chromosome and associated proteins [BR:cgib03036]
    127965838
Ubiquitin system [BR:cgib04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     127965838
Chromosome and associated proteins [BR:cgib03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     127965838
SSDB
Motif
Pfam: WD40 Beta-prop_TEP1_2nd WD40_Prp19 Beta-prop_TEP1_C WD40_WDHD1_1st WD40_CDC20-Fz EIF3I WD40_MABP1-WDR62_2nd Beta-TrCP_D Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_EML WDR55 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EIPR1 F-box-like Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_SPT8 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_IP5PC_F Beta-prop_IFT122_1st NBCH_WD40 WD40_like Beta-prop_IFT140_1st F-box Beta-prop_WDR11_2nd Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_VPS8 WD40_RFWD3 Beta-prop_Nup120_160 PEP5_VPS11_N WD40_2 DUF1513 DUF4508
Other DBs
NCBI-GeneID: 127965838
NCBI-ProteinID: XP_052422483
LinkDB
Position
B10:11626985..11660889
AA seq 536 aa
MEPEMEDKTLELMNISVMDSQTADRSPKITLIKPTFICPQVSNGPLTGSRKRLSEGNYEK
EKDVCIQLFDQWSEADQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPAQGLDHI
AENILSFLDARSLCSAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERHQWEKYL
FKNRTTEVPPNSYYRSLYPKIIQDIETIEANWRCGRHNLQRIQCRSENSKGVYCLQYDDE
KIISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVTSGE
VLNTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDF
DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIE
CGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVPV
CVQEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVSTNGQTEGRSPSRTYTYISR
NT seq 1611 nt   +upstreamnt  +downstreamnt
atggagccggagatggaggacaaaaccttagagctgatgaacatctctgtcatggactcg
cagactgcagaccgctccccaaagatcacattgattaagcctacttttatctgtcctcag
gtgagtaatggacctttgacaggctctaggaagcggctgtcagagggaaattacgagaag
gagaaggacgtgtgcattcagctctttgatcagtggtctgaggcagaccaggtggagttt
gtggaacacctgatctcacgcatgtgccattaccaacacggccacataaactcctacctc
aaacccatgctccaaagggacttcatcacggcactgccagctcagggtctggaccatata
gcggagaacatcttgtccttcctggacgcacgctctctttgttcggctgagctggtgtgt
aaagaatggcagcgtgtgatatccgaaggcatgttgtggaagaagctgatcgagaggatg
gttcggacagacccgctgtggaaaggcctttcagagagacaccagtgggaaaaatacctg
ttcaagaaccgcacaacagaagttcctccaaactcatactaccgctctctttatccaaaa
atcattcaggacattgagaccatcgaggcaaactggaggtgtggccgacataacctgcag
aggatccagtgtaggtcggagaacagcaaaggtgtttactgccttcagtatgacgacgaa
aagatcatcagcggtctacgtgataactccatcaagatatgggataaacagactctggag
tgtttgaagatcctgacggggcacacaggctctgtgctgtgtctgcaatacgacgagaga
gtcattgttaccggctcctctgattccactgtcagagtgtgggatgtgacctcgggggag
gttctgaacactctgattcaccacaacgaggccgtgctccacctgcgattctgtaatggg
ctgatggtcacctgctcgaaggatcgctccatcgccgtctgggacatggcctctcctacg
gacatcagtctccgccgggtcctcgtcggacacagggctgccgtcaatgtggtcgacttt
gacgacaagtacattgtctctgcctctggagatcggaccataaaggtgtggagtacaagc
acctgcgagtttgttcggacactaaacggtcataagcgaggaattgcctgcctgcagtac
agagacagacttgtggtcagcggctcctccgacaacaccatcaggctgtgggatattgag
tgtggagcttgcttgcgggttttggaagggcacgaggagcttgtccgctgtattcgcttt
gataacaagcggatcgtgagtggagcgtatgacggtaaaattaaagtatgggacctacaa
gctgctctcgatccacgagccccagccagcactctgtgtctacgtacactagtgcctgtc
tgcgtgcaggaacattctggccgagtgttccggctccagttcgacgagttccagatcatc
agcagttcccacgatgacactatcctgatctgggacttccttaatgtgtcgaccaacggg
cagacggaaggacgatcgccgtcccgcacgtatacctatatatccagatag

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