Carassius gibelio (silver crucian carp): 127965840
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Entry
127965840 CDS
T08819
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1b isoform X1
KO
K03265
peptide chain release factor subunit 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127965840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127965840
03012 Translation factors [BR:
cgib03012
]
127965840
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
127965840
Translation factors [BR:
cgib03012
]
Eukaryotic type
Release factors
127965840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
127965840
NCBI-ProteinID:
XP_052422489
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All DBs
Position
B10:11618930..11626515
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AA seq
442 aa
AA seq
DB search
MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFVSNDKVNVAGLVLAGSADFKTELSQSD
MFDPRLQAKVLKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDTMRYVLRCHGENTTPENDEKILYLTPEQEKDKS
HFTDKETGQEHELIESMPLLEWFANSYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRY
RVDFQGMDYQGDDDEFFDLDDY
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccccagcgcagcggacaggaacgtggaaatctggaagattaagaagttg
atcaaaagccttgaggcggctagaggaaatggcaccagtatgatttccctcatcatccca
cccaaggatcagatttcacgtgttgcgaagatgttggctgatgagttcggcacagcttcg
aacatcaagagcagagtcaacagactctccgtgctgggagccattacctcagtacagcag
agactcaaactctacaacaaagtgcctcctaatggcctggtggtgtattgtggcaccata
gtgacagaggaaggcaaagagaagaaagtaaacatagattttgagccttttaaaccaatc
aacacatccttgtatttatgtgacaacaagttccatactgaggctctaacagctctgctg
tcagacgacagcaagttcggtttcattgtgattgatggtagtggtgccctgtttgggact
ttgcaaggcaacacaagggaggtgttgcacaaatttactgtggacctgcccaaaaaacac
ggtagaggaggacagtctgctcttcgatttgcacgtttgaggatggagaagagacataac
tatgtgcgtaaggtagcagagactgctgtgcaactctttgtgtccaatgacaaggtcaat
gtggcaggactggttcttgccggatcggccgatttcaaaacggagctcagccagtcagac
atgtttgatccgaggctacaagcgaaggttctgaagctggtggatatatcgtatggagga
gagaatggttttaaccaggccattgagctttcagcagaagtgctgtccaatgttaagttc
atccaagaaaagaaactaataggccgatactttgatgagatcagtcaggacacagggaag
tattgttttggagttgaagacacactcaaagcactggagatgggagcggtggagattctt
atagtttacgagaacctggacactatgcgttatgtcctacgctgtcatggagaaaatact
acaccagaaaatgatgaaaagatactctatctgacaccggaacaggagaaggacaagtct
catttcactgacaaggagacaggtcaggagcatgagctgattgagagcatgccgctgctt
gagtggttcgccaatagctacaagaagtttggggccacgctggaaattgttacggacaaa
agccaggagggttcacagtttgtgaaaggctttggaggcattggtggaatcttgcggtac
cgggtggacttccaaggcatggattaccagggagatgatgatgaattctttgatttagat
gactactag
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