Carassius gibelio (silver crucian carp): 127965921
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Entry
127965921 CDS
T08819
Name
(RefSeq) toll-like receptor 3
KO
K05401
toll-like receptor 3
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04217
Necroptosis
cgib04620
Toll-like receptor signaling pathway
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
127965921
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
127965921
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127965921
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cgib04054
]
127965921
04090 CD molecules [BR:
cgib04090
]
127965921
Pattern recognition receptors [BR:
cgib04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
127965921
CD molecules [BR:
cgib04090
]
Proteins
127965921
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
Tlr3_TMD
TIR_2
LRR_9
TIR
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
127965921
NCBI-ProteinID:
XP_052422637
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Position
A1:complement(5231775..5237233)
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AA seq
901 aa
AA seq
DB search
MELMKLILLPFFCMCFHGHTAYPHKSTCTIKNAKADCSHMNLDAVPTDLPKNITTLDMSH
NRLKTLSSLHLYSNLVTIDASYNSLTAIEKDLCLSVPRLQILNVQHNEVYLISEKDLKNC
FHLTRLDLSDNRLKLNGEPFSVLKSLTWLDVSRNKLKSAKLGTHPQLPNLITLVLSGNQI
SVLQKNDFSFLSNSSAFRVLILSSLSLKKVESGCFQAIARLSDLVLDYCKVSPQLTTSLY
EELAGTALRNLSLKNIQQVTLSNTTFQGLEKTNITVLDLSSNTMSKIAEEAFQWFPRLEI
LSLEHNTLRHLTNGTFRGLGNLRQLNLQKALIKSHTSSLPNIEDFSFHHLVQLEHLCMAN
TAFREITGHIFSGLLNLKTLDLSWSITGLKMVTNRTFASLQESPLLQTLNLTAMGINKLA
PGAFSSLGNLTTLLLSHNFIYQQLKGDEFEGLSNIKQIDLSMNQQSISLTNTSFIHVPTL
RSLKLGRALKGTLAMEPSPFKPLINLTFLDLSNNNIANINACLLKGLNHLKVLKMQHNNL
ARLWKTANPGGPVLFLQDATKLSVLDLDYNGLDEIPLNALRGLSELRELSLHGNLLDQLH
ASVFDDLQSLKYLYLQKNLITSVQQVTFGVPLSNLTELYMDHNPFDCTCESILWFSEWLN
STSASIPGFPQSYICNTPNAYFNHSVMKFDPLSCKDMTPFKALYILSSTAVLMLLFAAFL
VHFQGWRIQFFWNIMVNRMLASLEDESITEGRYAYNAYIIHSAEDRPWVERSLLPLEDEK
FHFFLEDRDAVPGFSQLDTIVENMGQSRKILFVITEKLLKDPWCRQFKAHHALHQVMEDN
RDSLILIFLQDVTDYSLNRSLHLRRGMLKPHCILYWPLHRERIPAFHQKLRSALASTNKV
N
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggaactgatgaaactcatattgttgccctttttctgcatgtgttttcatggacacact
gcatatccacacaagtcaacatgtacgattaagaatgccaaagcagactgcagtcatatg
aatctggatgcagttccaacggacctaccaaaaaatatcaccacattggacatgtctcac
aatagacttaaaactctgtcttctctgcatttgtactcgaatctggtgactatagacgcc
agctacaactctttaactgcgatagagaaggatctatgtctttctgttccacgcctgcag
attcttaatgtgcaacacaatgaagtgtatttgataagtgagaaagacctgaaaaactgt
tttcatttaacaagacttgacctgtctgacaacagactgaagctaaatggagagccgttc
tctgttctaaagagtttgacatggttggatgtatctcgaaacaaactgaaatcagcgaaa
ctgggcacacaccctcagctgccaaacctaatcaccctcgttctctctggaaatcaaatt
tctgtgctgcaaaagaatgacttctcattcctcagtaattcttctgcatttcgggttctg
atactctcgtctctgtctcttaaaaaggtagagagtggctgtttccaggctattgctaga
ctttctgacttagtcctggattactgcaaggtcagccctcagctgaccaccagtctttat
gaagaacttgctggcacagctttgagaaacctttcccttaagaacattcaacaggtgact
ctctcaaacacaactttccagggtctagagaagactaacatcacagtgctcgacctcagc
agcaacacaatgtcaaagattgcagaagaagcctttcagtggtttccccgactggaaatt
ttatccctggagcataacactcttagacacctaactaatggcactttccgtggattggga
aacctgaggcagcttaacctgcagaaagcactgattaagagtcatacatcatcattaccg
aatattgaagacttctctttccaccatttagtccaattagagcatctatgcatggcaaat
actgcgttccgagagataacagggcatatattttctggacttctgaacctaaagacactg
gatttgagttggagcatcacagggttgaagatggtcacaaacagaacatttgcttctttg
caagaatctccactccttcagactcttaatcttactgccatgggtatcaacaagttggca
cctggggccttttcaagtttgggcaacctcactacactcctgcttagtcacaatttcatt
tatcagcaattgaaaggagatgagttcgagggcctctctaacattaaacagattgactta
tctatgaaccagcaaagcatttcccttaccaatacatcattcatccacgtcccaacatta
aggagtctaaagctcggccgtgccctaaaagggactttagctatggaaccatctccattc
aagccacttatcaacctcacatttctagatctcagtaataacaatattgcaaacataaat
gcttgcttgctgaaaggactcaaccatctgaaagtgctgaaaatgcagcacaacaacttg
gctaggttgtggaagacagccaaccctggtggtccagtgttgtttctccaggatgccaca
aaactgtctgtcctggatttggattacaatggtttagatgagattccactcaatgctttg
cgcggcctttcagagttacgtgagctaagtctccatggtaatcttttggatcagctgcat
gcctctgtttttgatgacctacagtctttaaagtacttgtatcttcaaaagaaccttata
acctctgtccaacaagtcacttttggtgtgccgctgtccaacctgacagaactttacatg
gaccacaacccctttgactgcacctgcgagagcatcctgtggttctctgagtggcttaac
tctaccagtgccagcattcctggattccctcaaagttacatctgcaacaccccaaatgcc
tactttaaccactctgtcatgaaatttgacccattgtcctgcaaggatatgacacctttt
aaggcactgtacattttgagtagcacagcagtgttgatgttgttatttgcagctttcctg
gtacacttccagggatggagaatccagttcttctggaacataatggtaaaccgtatgctg
gcgtcactggaggatgaaagcattactgaaggtagatatgcatataatgcatatatcatc
cacagtgctgaggacaggccatgggtggaacgaagcttgctccccttagaggatgaaaaa
ttccatttttttcttgaagacagagatgcagtacctggcttttctcaacttgacaccatt
gttgaaaacatgggacagtctaggaaaatcctttttgttattacagaaaagcttctaaag
gatccatggtgtcggcaatttaaagcccatcatgcacttcaccaggtaatggaggacaat
cgtgactcgctgattctgatttttttgcaagatgtaactgattacagtctgaaccgctct
ctgcatcttcgccgcggcatgttgaaacctcattgtatcctctactggcctttacacagg
gaacgaatcccagctttccatcagaaactccgctcagcattagcctctaccaacaaggtc
aactaa
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