Carassius gibelio (silver crucian carp): 127965942
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Entry
127965942 CDS
T08819
Name
(RefSeq) small fragment nuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127965942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127965942
03009 Ribosome biogenesis [BR:
cgib03009
]
127965942
Messenger RNA biogenesis [BR:
cgib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
127965942
Ribosome biogenesis [BR:
cgib03009
]
Eukaryotic type
Pre-60S particles
RNases
127965942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
127965942
NCBI-ProteinID:
XP_052422623
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All DBs
Position
B10:20315173..20317978
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AA seq
261 aa
AA seq
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MQAYTWMAARVSAFRVLTLVCVSSQRVKAPLLVFTAHNFSLFSPCTSLLAKVLMSRRAHS
RRMSQSLAQRMVWVDLEMTGLDIEKDQIIEMACIITDSDLNIIAEGPNLIINQPDELLDG
MSDWCKEHHGKSGLTQAVRDSHISLQQAEYEFLSFIRQHTPPGQCPLAGNSVHADKKFLD
KFMPQFMRHLHYRIIDVSTIKELCRRWYPEEYSIAPQKKSSHRALEDIQESIKELKFYRV
NLFKVKGKRKIVQNGDKTSAS
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcatacacgtggatggcagcgagagtttctgcattcagagtcctgactctagtc
tgtgtgtcatcgcagcgggttaaagcacccctactggtgtttacagcccacaacttctct
ctcttcagtccatgtacctctctgctcgccaaggttttgatgtcaagacgagctcacagt
aggaggatgtcacagtccttggcgcagcggatggtctgggtagatctggagatgacaggg
ctggatatagagaaggaccagattattgagatggcttgcatcatcacagattcggatctg
aacatcattgcagaggggccaaatctgataatcaaccaaccagacgagctgctcgatggc
atgtcagactggtgcaaagagcatcatgggaagtcagggttgactcaggctgtcagggac
agtcacatcagtctccagcaggcggagtatgaattcctgtctttcatccgacagcacaca
ccacccggacagtgtcctctcgcagggaactccgttcacgctgataagaagtttctggat
aagttcatgccacagttcatgcgacatctgcactatcgtatcatagacgtgagcaccatt
aaagagctgtgcagacgatggtatccagaggagtacagtatcgcaccgcagaaaaagtct
tcgcacagagcgctggaagacatccaggagagcatcaaagaactgaagttttacagagtg
aacctttttaaagtgaaggggaagagaaaaatagtccaaaatggtgataagacatctgcg
agctaa
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