Carassius gibelio (silver crucian carp): 127966154
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Entry
127966154 CDS
T08819
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13a
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgib03021
]
127966154
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
127966154
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
127966154
NCBI-ProteinID:
XP_052422935
LinkDB
All DBs
Position
B10:complement(15491552..15552810)
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AA seq
2154 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFYLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILCSFSRC
LKADVLSVWRRSQRQGRRELWLFWWGDDPNFSDLIHHELTGEDDGVWESGLSYECRTLLF
KAIHNLLERCLMNRSFVRIGKWFVKPYEKDEKPINKREHLSCSFTFFLHGDSNVCTSVEI
NQHQPVYHLNEEHLTLAQQASSPFQVILSPFGLNGTLTGQSFKLSDPPTQKLIEEWNQFY
PISPTSKESTEDKMEDIDWEDDSLAAVEVLVGGVRMVYPACLVLVPQSDVPTVTPTGSSH
CTAVYSNGHQIPASNRDPAISSVTLTPPTSPEEAQTVHSHSAQKWMRLPVAMDGFSVDST
SHHGGKIPRRMASQVVESVWQECNINRAQNKRKFSATVSNGTSEEETLMKVGTWDFVDST
QRSSCKCSRHKTLKQRASSTPGQPPTAGQTQQQPVKHKAGEKPEKGDKQQKRPQTPFHHR
NSVCEDVSMETDTSAGQHLALRGQEGGRFSGLRPSDVSSGTKPPQLHSGGGATVANSGQT
EMVGSPQPPPLSPHPCERGEEASDTIKNPSTPHSQHFYPPSSEPCLLPQKGPDDARLEPL
TQPFPPAYPEPLEPTPYVSAAVNLDDDGSHVPWRFFNLPRRKDAEFPTPSLPGDKLREEA
SIGAEGIMSVTELMVASKRPLKVSEERIQTYLQRQNQYLAAAITDGDHEPEVDPYAFVDG
DVKFTFSDKKDKAGGEREPGKKHKGEDGSASLSDDAQRAAAHNRAATTSLIHDSDLAVSF
KDLDNLFNSDEDEQTPGARRAVNGADEKFGSKESKPATMDSGPCISAADLHQMFPTPPSL
EQHNMGYSPMNKEYGCMEPGSGLNNLDGSSALSGQFKIEVEESFCSPKPSEIKDFSFVYK
PELCQPFVGCSMFAPLKSLPSQCLPPIKLPDECVYRPSWTVGKLELLNSVPAMSIFSKDG
ESNAMEQEYIQTYTPQTHTPFLSNSAPPSNSGTSILPSPATPRFSAPTPRTPRTPRTPRG
PASVQGSLKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLILSESVMNLFK
DCNFDSCCICACNLNIKGADVGIYISDPNMEAQYPCLCGFSAVVNRRYGNGSGLFLEDEL
DIIGRGSDVSQEAEKRFEAIRSTSLEKTGGGGKDRVPDELISVLQDQCTNPFSPMLALDP
EGLSSQGPGGATVPPCVRVEERDFHNDCYLALEHGRQFMDNMSGGKVDETLVKSTCLHHW
AKHSAVDVSGLCSQDVLRVLLSLQPVLQDAIQKKRTVRSWGVQGPLTWQQFHKMAGRGSY
GTDESPEPLPIPTFLVGYEYDFVVLSPFGLPYWEKLLLDPFGSHRDVGYLVLCPDSDALL
SGAKSFFRELTAVYESCKLGQHRPISKVHADGIVRVGGAAAKKLSEQPVSDWFLKAASGS
SDAFAKLKLFAQVCRHDLAPYLATQSLDSSLLIQPTPVPSSTQSSSSQSSGSASSNSQTS
MASGGSALNNNSAASNSGSGLPDNTNNTPSSSGPQGSSIQSAKPSSFPPFGSMGVQGNSS
QSGALGQQAVTQNSSLSGDNSTVNSQTQGPSEPPESTMEREKVGVPTDGDSHAITYPPAI
MIYIVDPFSYEESEPGVSQSSMWTLGLLRCYLEMLQALPAHIRNSVFVQIVPCQYLLQPV
RSEERYLYAQHLKSLAFSVFTQCKRPLPASTNVKSLTGFGPGLALDTSLRNPDRPECLRL
YTPPFILAPTKDKQTELGETFGEASQKYNVLFVGYCLSHDQRWLLATCTDLYGELLETCI
ISIDVPNRARRKKGSARKLGLQKLWDWCLGLVQMTSLPWRVVIGRLGRIGHGELRDWSIL
LSKRNLQSVSRRLKENCKLCGISAADTPSILSACLVAMEPQGSFVIMPDSVSTGSVFGRS
TTLNMQTSQLSTPQDTSCTHILVFPTSASVQVNSSNYQHENIEIAFNPGNDGSDPMGSIL
YFLEQENDLVDPDIINILPASPTTSPVHSPGSQYPHGGDGSKGQSTDRMESHEEAPNILQ
QPLALGYFVSTAKAGPLPDWFWSACPQAQNQCPLFLKASLHLHVSSVQSDELLHSKHSHP
LDSNQTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPIHFVVLNQMYNFIMTML
NT seq
6465 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttgtttcgtaccgaacggggccagcttggaggactgccattccaatctattc
tatctggctgatttgacagggataaaatggaagaggtacgtgtggcagggtccgacctca
gcgcccatcctgttcccagtcaccgaggaggaccccatcctctgcagcttcagccgttgt
ctgaaggcggatgtgctgagcgtgtggaggcggagccagaggcagggacgccgagagctc
tggctcttctggtggggtgacgatcccaacttctctgatctcatccaccacgaactgaca
ggcgaggatgacggtgtgtgggaaagcggtctgtcctacgaatgtcgaactcttctcttc
aaggccattcacaacctgctggagcgctgtctgatgaaccgtagtttcgtgcgcatcgga
aaatggtttgtcaaaccctacgaaaaggacgagaagcccattaacaagagagaacacctg
tcttgctctttcacgttcttcctgcatggagacagtaatgtgtgcaccagcgtggagatc
aaccagcaccagcccgtgtaccacctgaacgaggagcacctgacactggcgcagcaggcc
tccagcccattccaagtgattctgagtccatttggactgaacgggacattgaccggtcag
tccttcaagctgtccgaccctccgacacagaagctcattgaagaatggaaccagttctat
cccatcagcccgacctccaaggagagcacagaggacaaaatggaggacatcgattgggag
gatgactccctggcagcagtggaagtgcttgttggtggtgtgcgcatggtgtatcctgca
tgtctcgtgttagtcccacagtcagacgtccccactgtaacacctacggggtcctcgcac
tgcacagctgtctattcaaatggccatcaaatccctgcctcaaaccgtgaccccgcaatt
tcttcagtgaccctgactcctcccacctcacctgaggaggctcagacagttcactctcac
tcagcacagaagtggatgcggttgccggtggcgatggatggattcagtgttgacagcacc
agtcatcacggtggcaagattccacgcaggatggcaagtcaggtggttgagagcgtttgg
caggagtgcaacatcaaccgagctcagaacaaacggaaattctctgccacagtctccaat
gggaccagcgaggaggagacgctgatgaaagtgggaacctgggactttgtcgactccaca
cagagatcaagctgcaagtgttcgaggcacaaaaccctgaagcagagagcaagcagcacg
cctggtcagccgcccaccgctggtcagacgcagcagcagcccgtcaagcacaaagctggg
gagaagcccgaaaaaggtgacaagcagcagaaacggccgcagacgccctttcaccatcgc
aactctgtctgtgaagatgtctcaatggaaaccgacacttctgcgggtcagcacttggct
cttagaggccaagagggtggaaggttttctgggcttcgcccatctgatgtgagctctggc
acaaaacctccacaactgcacagtgggggcggagctactgtggccaacagtggccagaca
gagatggtcggctctcctcagccaccgccgctgagccctcacccttgcgaacgtggcgag
gaagcctcagacaccattaaaaacccctccacaccacacagccaacatttttaccctcct
tcctcagagccatgcctcctgccccaaaagggcccagatgatgcccgtttggagcccctc
acccaaccttttccccctgcgtaccccgagcccctggagcccactccgtacgtcagtgca
gcagtaaacctggatgacgatgggagccacgtgccatggagattcttcaacctgccccgt
aggaaagatgccgagtttcccacgccgtcactaccaggagataaactcagagaagaggcg
tcaatcggagctgaagggattatgtctgttactgagttaatggttgcctccaaaaggccg
ctcaaggtctcagaagaacggatccagacgtacctgcagcgacagaaccagtacctggct
gcagccatcacagacggggaccacgagcctgaggtcgacccctatgcttttgttgacgga
gatgttaagttcaccttctcggataagaaagacaaagctgggggagagagagaaccaggg
aagaaacacaagggagaagatggcagtgcttcactatcagatgatgcgcagcgggctgcg
gcccataaccgggctgctaccaccagcctcatacatgattcagacctggcagtctccttc
aaagacctggacaacctctttaactcagatgaggacgaacaaacacctggagcacggaga
gctgtaaatggagcagatgagaagtttggcagcaaggagtcgaaaccagccacaatggac
tctggcccctgtataagcgcggctgatctacaccagatgttccctacgcctccatcttta
gagcagcacaacatgggttactctcccatgaacaaagagtatggctgtatggagcctggc
tcaggcctcaacaatctagatggctcttctgctctcagtggtcagtttaaaatcgaggtg
gaggagagtttctgcagccccaaaccttccgaaatcaaggacttctcatttgtgtacaag
cctgagttgtgtcagccgtttgtgggctgttccatgtttgcccccctgaagtctttgccc
agtcagtgcctgccccctatcaaactgcctgatgagtgtgtttacaggcccagctggaca
gtgggaaaactggagctactcaactctgtacctgctatgagcattttcagcaaggatggt
gaaagcaatgctatggaacaagagtatatccagacatacacccctcagacccacacacca
ttcttgtctaacagcgctccgcccagcaacagcggcacgagcatcctcccatcccctgcc
acgcctcgcttctcagctcccacccctcgtaccccacggacacctcggacccccagaggt
ccagccagtgtgcaaggttccctcaaatatgagaactcggacttgtactcgccggcctcg
acgccctccacctgcaggccgctcaactccgtggagcctgcgacggttccctccatcccc
gaagcccacagcctatacgtcaacctcatcctgtcggagtctgtcatgaacctgttcaag
gactgcaacttcgacagctgctgcatttgcgcatgcaacttgaacatcaaaggcgctgac
gtgggcatctacatcagtgaccccaacatggaggcccagtatccctgcctgtgcggcttc
agcgctgttgtcaaccggcgctacggtaatggctccggcctcttcctggaagacgagctg
gatatcatcggacggggttcggacgtgagccaggaggcggagaagcgctttgaggcaata
cggagcacgtctctggagaagacagggggtggaggcaaggatcgagtcccggacgagctt
atctctgtcctgcaggatcagtgcactaatcctttctcccctatgctggcgttggaccca
gagggactgtcttcccaagggccagggggcgccactgtaccaccatgtgtgcgtgtggag
gaaagggacttccacaatgactgttacctggctctagaacacgggcggcagttcatggat
aacatgtccggtgggaaggtagatgagacgctggtgaagagcacttgtttgcaccattgg
gccaaacacagcgctgtggatgtgagcgggctgtgctctcaggacgtgttgagagttctc
ctctctcttcagcctgttcttcaggatgccatccagaagaagaggactgttcgctcatgg
ggagtccaggggcctctcacatggcagcagtttcacaagatggctggaagagggtcttat
ggcactgatgagtctccggagcctctgcccattcctaccttcttggttgggtatgaatat
gactttgtggtgctgtcgcccttcggcctgccctattgggagaagctactgctggatccc
tttggctcccacagagacgtgggctatctggtcctctgcccggacagcgatgctctcctg
tctggagccaagagcttctttagagagctgacagcggtctacgagtcttgtaagctcggt
cagcatcgaccaatctccaaagtgcatgctgatggcattgtaagggtgggtggagcagct
gccaagaagctctcagaacagccagtcagtgattggttcctgaaagcagctagtggcagc
agtgatgcatttgccaagctcaaactgtttgcccaagtctgcagacacgacctcgctcca
tacctcgctacacagtctttggacagctctcttctcattcagccaacccctgtcccttct
tccacccaatcatcttcctcgcaatcctcaggctccgcctcctccaactcccaaacctca
atggcctccggaggctctgccctcaacaacaacagtgctgccagcaacagtggctcaggc
ctgccagacaacaccaataacaccccctcctcctcaggccctcagggcagcagcatccag
tctgccaaacccagctcattccctccctttggaagcatgggagtccaaggtaacagctcc
cagtctggggctctgggccagcaggctgtcacccagaactcaagcctctccggagacaat
tcaacagtcaacagccagactcaggggccatctgaaccaccagagagcactatggagaga
gaaaaggtcggagttcctacagatggagattcccatgccatcacgtacccacctgccatc
atgatctatattgtggaccccttctcatatgaagagtcggagccaggggtgtcacaatca
agcatgtggacgctgggactcctccgctgctacctggagatgctgcaggcccttccagct
cacatccgcaactctgtgtttgtacagattgtcccctgtcagtacttgctccagcctgtg
aggagtgaagagaggtacctctacgcccagcacctcaagtctctagccttctccgtcttc
acccagtgcaaaagacccctcccagcctccaccaacgtgaaatcactgacgggtttcggc
cccggcctcgccctcgacacttccctcaggaacccagatagaccggagtgtctgcgattg
tacacgccacccttcatcttggccccaacgaaagacaagcaaacggagctgggtgagact
ttcggagaggcgtctcagaagtataacgtcctgtttgtgggctactgcctgtcacatgat
caaagatggctgttggctacctgtacggacctgtatggagagctgctggaaacctgtatc
atcagtatagacgtacccaacagagcaagaaggaaaaagggatctgcccggaagctgggc
ctacaaaagctttgggattggtgtctaggtttggttcagatgacatcattgccatggaga
gtggtgattggccggcttggacgaataggtcatggagagttgcgagactggagtatttta
ctgagcaaacggaatctgcagtcagtgtctcggaggctgaaggagaactgtaagctgtgc
gggatctcagcagctgacactcccagcatccttagcgcctgccttgttgccatggaaccc
cagggctcatttgtcatcatgccagactctgtgtcaacaggttcggtgtttggtcgcagt
acaactctgaacatgcagacgtcccagctgagcaccccgcaggacacgtcttgcacacac
atcctggtgttccccacctctgcttctgtgcaagtcaacagctccaactaccaacatgag
aacattgaaattgccttcaaccctggcaatgatggatcagatccaatgggaagcatcttg
tactttctggagcaggagaatgacctggttgaccctgacatcataaatatccttcctgcc
tcacccaccacgtcaccagtccactcacctggatcccagtacccccacggaggagatggg
agcaagggtcaaagtactgaccgcatggagtctcatgaagaagctcccaatatcctgcag
cagccattagctctgggctattttgtgtccacggctaaagcaggtccactgcctgactgg
ttctggtctgcgtgtcctcaggcacagaaccagtgtccccttttcttaaaggcctctcta
caccttcatgtgtcttcagtgcaatcggatgaacttttgcacagcaaacactctcaccct
ctggactccaatcagacctctgatgttctcagatttgtgttggagcagtacaatgccctt
tcctggctgacctgtgaccctgcgacccaggaccgacgctcttgcctgcccatccatttt
gtagtgctcaatcaaatgtacaacttcattatgaccatgttgtaa
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