Carassius gibelio (silver crucian carp): 127966251
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Entry
127966251 CDS
T08819
Name
(RefSeq) protein strawberry notch homolog 1-like isoform X1
KO
K26273
protein strawberry notch
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgib03036
]
127966251
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127966251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
127966251
NCBI-ProteinID:
XP_052423078
LinkDB
All DBs
Position
B10:22466967..22485476
Genome browser
AA seq
1405 aa
AA seq
DB search
MDPGQDLLLAALSESGICPNDLFDVDPQDTLPLPASQQSVSLNALDIGLSNEASGIVRIE
PTVSPSPTVTIREKPQPSTTSFVLNQLNQLPSLGTIVVTKPSAGTTSRQTITVTKVVHTS
STAQRSSSSSPTVCTVVPPNNEQIRLKDLLRTSNLKTSSLGELMKLKPPPDIAQPVATAT
ATGTKIILISTKMVNRSAELNNGLKKEVSSKDVARIWVNDDMKMRSFSPVNKLPGMKEEE
EPEEEEEEELGHAETYAEYMPMKLRIGLRHPDPVVETSSLSSVNPPDVWYRLSIPEETID
RGWLSALQLEAVTYAAQQHETFLPNGDRAAYLIGDGAGVGKGRTIAGIIYENYLLGRKRS
LWFSVSNDLKYDAERDLRDIGAKNIQVHSLNKIKYGKISSKHNGSVKKGVIFATYSSLIG
ESQSGGKYKTRLKQLLHWCGDDFDGVIIFDECHKAKNVCPIGSSKPTKTGLAVLELQNKL
PKARVVYASATGASEPRNMAYMNRLGIWGEGTPFKEFTNFIQAVERRGVGAMEIVAMDMK
LRGMYIARQLSFTGVTFKIEEVPLTQVYIKMYNKAVRLWVSAREKFQQAANLMDAEQRMK
KSMWGQFWSAHQRFFKYLCIASKVRRVVQLAREQVKNGKCVVIGLQSTGEARTLEALEEG
GGELNDFVSTAKGVLQSLVEKHFPAPDRQKLFSLLGIDLSVKETPSPKETSSEQKGKKRK
GPETKKQVKKARKSGGLSGTSSDESNSDDSDKDAESDDSFKSLSSGEEDEDDFNPFKDDS
SEDEEDDPWLIRKDTKKSKDKRNKKKKKSIDPDSIQSALLASGLGTTRPTFTTPAIKPSN
NTVAVAKSEPEESSCVTSQDAVEDAQRMKRNLLEKLEQLAEDLPPNTLDELIDELGGPDN
VAEMTGRKGRVVSNDDGSISYESRSELDVPVEILNLTEKQRFMDGDKNIAIISEAASSGI
SLQADRRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFA
SIVAKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVNLDSPLVSPPAD
FDGDFFKEIRNGLIGVGLINVEDRSGVLSLDKDYNNIGKFLNRILGMEVHQQNALFQYFS
DTLSAVIQNAKKSGRYDMGILDLGSGDEKVKKVDVKKFLTPGYSTSGHVELYTVSVERGM
SWEDATHVWADQNGPDDGFYVQVRNNKKIAILIKEVDPRKRLFMVYRPNIGKQVKLETYV
DIKKRSKKVLSDDAKQHWIDQYSSSANVCSHAYWRGNCKKVSVGLQCEIGLRCRTYYVLC
GSVLSVWTKVEGVLSSVSGSNVKMQIVRLRTEDGQRIVGLIIPANCVSPLINILSSSDQS
QQLAVQQQQMWQQLHPQSISHTVNT
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggacaagatttgcttctggctgctcttagtgaaagtggaatctgtcctaat
gatctttttgatgttgaccctcaggacacacttccactccctgcttcacaacagtcagtc
tcattaaatgcacttgacatcggtctcagtaatgaagcttctggaattgtcaggattgaa
cctacagtatcacctagtcctacagtcacaatcagggagaagccccagccctcaacaacc
agcttcgttttaaatcaactgaatcagttgccatcactgggtacaattgtagtcaccaaa
ccctcagccgggaccacatccaggcagaccatcacagtaaccaaggtcgtacacaccagt
tcgacagcacaacggagctcttcatcctctcccaccgtttgcactgtggtcccaccaaat
aatgaacagatcaggttgaaggaccttctcagaaccagcaacctgaagacaagcagcctt
ggagagcttatgaagttgaagcccccaccagacatagcgcaacctgttgctacggcaaca
gccacaggcacaaaaattattctgatctccacaaagatggtgaacagatcagcggaatta
aacaatggcttgaaaaaggaagtgtccagcaaagatgtagcaagaatctgggtcaacgat
gacatgaaaatgcggagcttctcacctgtgaataaattaccaggaatgaaggaggaagag
gaaccagaggaagaggaagaggaggagctgggtcatgcagagacgtatgcagaatacatg
ccaatgaaactgagaattggactgcggcaccctgatcctgtggtggagaccagctctctg
tccagtgtcaacccaccagatgtgtggtaccggctttccattccagaggagaccatcgat
agaggctggttatctgccctacagcttgaggcagtcacgtatgctgctcagcaacatgag
acattcctaccaaatggagacagagcagcctacttgattggagacggggccggcgttgga
aagggtagaaccattgctggaatcatatatgaaaattatcttcttggcaggaaaaggtcc
ctctggtttagtgtctcaaatgacttgaaatacgatgcagagagggacttgagagacatt
ggagcaaagaatattcaggtccattcgctaaacaagattaaatatggaaagatctcatcg
aaacacaatgggagtgtgaaaaaaggtgtgatctttgccacatactcatccttgattgga
gagagccagtctgggggaaagtacaagacgagattaaaacagttactacactggtgtgga
gacgactttgatggtgttatcatatttgatgagtgtcacaaagccaaaaatgtttgtccc
attgggtcatccaagcccacaaagactgggctagcggttttagagctgcagaataagctg
ccaaaagcccgggttgtgtacgcaagtgctacaggagcgtccgaaccccgcaatatggcc
tacatgaatcgccttgggatctggggggaaggaactccatttaaggaatttactaatttt
atccaagctgttgaaagaagaggtgttggtgccatggagattgttgccatggacatgaag
ctgagaggaatgtacattgctcgacagctgagcttcacgggtgtgacatttaaaattgaa
gaagttcccttaacgcaggtgtacatcaagatgtacaacaaagcggttcgcttgtgggtc
agtgcaagagagaagttccagcaagctgccaatctaatggatgctgaacaacggatgaaa
aagtccatgtggggtcagttctggtccgcccaccagaggttcttcaagtacctgtgcatt
gcctccaaagttcggagagtggtgcagctggccagagagcaggttaaaaatggaaagtgt
gtggtgattggtcttcagtcaactggagaggctcggacccttgaggccttggaggaggga
ggaggcgagctcaatgactttgtttccactgcaaagggtgtactgcagtctctggtagag
aagcattttcctgcaccagacagacaaaaactcttcagtcttttaggtatcgacctaagt
gtgaaggaaacgccttcgcctaaagagacatcctctgagcaaaagggcaaaaaacgaaaa
ggtccagaaacaaagaagcaagtgaagaaggctcgtaaatctgggggtctgtctggtacc
agctcagacgagagcaactccgatgattcggacaaagatgcggaaagtgatgacagcttc
aagtccttaagctcaggggaggaggatgaagatgacttcaacccttttaaggatgattcc
agtgaggatgaggaagatgatccgtggctcatcagaaaagacactaaaaagagcaaagac
aagaggaacaaaaagaagaaaaagagcattgatccagactctattcaaagtgccttgtta
gcctccgggcttggaacaaccagacccacttttacaacccccgccattaaaccctccaac
aacacggttgctgtagccaagagtgagccagaggagagcagctgtgtgaccagtcaggat
gctgttgaagatgcccagcggatgaaaaggaacctgctggagaaactggagcagctggca
gaggatctgccgcccaacacgctcgatgaactcatcgatgagctgggaggccctgataat
gttgcagagatgactggccgcaaaggcagggtagtcagcaatgacgatggcagcatttcc
tacgagtctcgatcagaacttgatgttccagtggaaatcttaaacctcacggagaagcag
aggttcatggatggtgataagaacatcgcaattatctcagaggctgccagctctggtatt
tcacttcaagccgaccgcagagtgaagaaccagaggaggagggtacacatgacattagag
ctgccctggagtgctgacagagctattcagcagtttggtcgaacacaccgatccaaccag
gtcacagcacccgagtatgtgttcctcatctctgaacttgctggggagcagcgattcgcc
tcaattgttgccaaacgtctagaaagcctgggggcgttaacgcatggagacagaagggca
acagagacaagggatctcagccgatttaactttgacaacaaatatggcagaaacgctctg
gaaatagttatgaagtctattgtcaatctggactctcctttagtgtctccacctgctgac
tttgatggggatttctttaaagaaatccgcaatggtttgattggagtgggactgataaat
gtggaggatagatctggtgtcctctcactggacaaagactacaacaacatcgggaagttc
ttgaacaggattcttggaatggaagtccatcaacaaaatgctctctttcagtatttctct
gacactttgagcgctgtcattcagaatgctaaaaagagtggaagatacgatatggggatt
ttagatttgggctctggagatgagaaagtgaagaaagttgatgtaaagaaattcttgaca
ccaggatattccacctcagggcacgtggagctctatacagtgagcgtggagcggggaatg
tcatgggaggatgccacccatgtctgggccgaccagaacggaccggatgatggtttttat
gtacaggtgcggaataacaagaaaattgccatcctaataaaggaggtcgatcccagaaag
agactctttatggtgtacagaccaaatataggaaaacaagttaaactggagacttacgtg
gacatcaaaaagagaagtaaaaaggtcctctctgatgacgccaagcagcactggattgat
cagtacagctcctctgcgaatgtctgctcgcacgcgtactggcgagggaactgtaagaaa
gtgtcggtggggctacagtgtgagatcgggctgcggtgcaggacatactatgtcctctgt
ggctctgtcctcagtgtgtggaccaaagtggagggcgtgctgtcctcagtcagcggatcc
aatgtgaagatgcagattgtacgtttgagaacagaggacgggcagagaattgtgggtcta
atcattcccgccaactgcgtgtcgccactgatcaatatcctctcatcatcggatcagtct
cagcagctggccgtgcagcagcagcagatgtggcagcaactccatccacagagcatcagc
cacaccgtcaacacatag
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