Carassius gibelio (silver crucian carp): 127966263
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Entry
127966263 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23 isoform X1
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127966263
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
cgib04031
]
127966263
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127966263
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127966263
GTP-binding proteins [BR:
cgib04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
127966263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arf
Roc
Ras
SRPRB
G-alpha
zf-RING_UBOX
zf-B_box
zf-RING_5
Gtr1_RagA
zf-RING_2
MMR_HSR1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
127966263
NCBI-ProteinID:
XP_052423101
LinkDB
All DBs
Position
B10:7488028..7498513
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AA seq
606 aa
AA seq
DB search
MAAAVGVNKQTSAAAMEPCVRHGRSTTANAVKVLECGVCEDVFSLQGDKVPRLLLCGHTV
CHDCLTRLPLHGRAVRCPFDRQATELGDSGVWGLKKNFALLELLERLQNGASSQSGMSED
VLREMGECIIRCDEDETHTASMYCTVCATHLCAECSQLTHSTRTLAKHRRVPLADKPHEK
MLCPQHQVHAIEFVCLEDGCQPGPLMCCVCKEYGKHQGHKHAVLEAEANQIRASILDMAH
CIRTFTEEVSEYSRKLVGIVQQIEGGEQIVEDSMGMAHTEHVGVCFGFSYCICNLNKFAL
NSSLVSTQVPGAAESARSCVRAYFADLHETLCRQEEMALSVVDAHVRERLIWLRQQQEDM
TILLSQVSTACLHCEKTLQQDDCRVVLAKQEINRLLETLQKQQQQFTELADHIQLDAGIP
VTFTKDNRVHIGPKMEIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNL
KFTIWDVGGKHKLRPLWKHYYLNTQAVVFVIDSCHRDRLMEAHSELAKLLTEKELRDALL
LIFANKQDVPGAVSVEEMTELLSLHKLCCGRSWHIQGCDARSGMGLHEGLDWLSRQLVAA
GVLDVA
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgctgtcggtgtaaataaacagacgagcgcagcagcgatggagccttgtgtg
agacacggccgcagtacaaccgctaatgcggtgaaggtgttggagtgtggtgtttgcgag
gatgtgttttcactgcaaggtgacaaggtgccgcgtctgctgctgtgtggacacacggtg
tgtcacgactgcttgacccgtctgcctcttcacggcagggcagtgcgctgtccctttgac
cgacaggccacagagctgggagactcgggtgtgtggggcctgaagaagaactttgctctg
ctagaactgcttgaacggctgcagaatggggccagcagtcagtcgggcatgtctgaggat
gtgcttcgagagatgggagagtgcataatccgctgtgatgaggatgagactcacactgct
tccatgtactgcacggtttgtgccacacatctgtgtgcggagtgctcccagctcacccac
tccacccggacactggccaaacaccggcgtgtgccgctggcagacaagccccatgagaag
atgctctgtccacaacaccaggtgcacgccattgagtttgtgtgcctggaggacggctgc
cagccggggccgctcatgtgctgcgtgtgcaaggagtacgggaagcaccaaggacacaag
catgctgtgctggaggctgaagccaaccagatccgagcatctattctggacatggcacac
tgcatccgtacattcacagaggaagtgtcggagtactccaggaaactagtgggcatcgtg
cagcagatcgaaggaggagagcagatcgtggaggacagcatgggcatggctcacactgaa
catgtaggagtgtgttttgggttttcatattgcatttgcaatctaaataagtttgcactg
aactcttccctggtttccactcaggtaccaggagctgccgaaagcgcccggtcttgcgtt
cgtgcctattttgcggatctccacgagacgctgtgtcgtcaggaggagatggctctgagc
gtggtggacgcacacgtccgagagaggctgatctggcttcgacagcagcaggaggacatg
accatactgctgtcccaggtgtccactgcctgcctgcactgcgagaaaaccctgcagcag
gatgattgcagggtggttttggcgaaacaggagatcaaccggttactagaaacactgcag
aaacagcagcagcagttcacagagctggccgaccacattcagctggacgcaggcatccct
gttaccttcactaaggacaaccgtgtgcacattggtccaaaaatggagatccgggttgtg
actttggggttagatggagctggcaaaactactattctctttaaactgaagcaagatgag
tttatgcagcccataccgaccataggttttaacgtggaaactgtggagtacaaaaacctg
aaattcaccatttgggatgttggtggcaaacacaaactccgtcccctgtggaaacactac
tatctgaacacacaagcggtggtgtttgtgattgacagctgtcacagagaccggctgatg
gaggctcacagtgaactggccaaactgctgacggagaaagagctccgagatgctctgctg
ctcatcttcgccaacaaacaggacgttcccggcgcggtgtctgtggaggagatgacggag
ctcctgagcttacacaaactgtgctgcggccgcagctggcacatccagggctgtgacgcc
cgcagcggcatgggtctacacgaggggttagactggctctcacgccagctggtggccgca
ggagtgctggatgtggcctga
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