Carassius gibelio (silver crucian carp): 127966275
Help
Entry
127966275 CDS
T08819
Name
(RefSeq) probable inactive glycosyltransferase 25 family member 3
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib00310
Lysine degradation
cgib00514
Other types of O-glycan biosynthesis
cgib01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
127966275
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
127966275
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cgib01003
]
127966275
Enzymes [BR:
cgib01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
127966275
Glycosyltransferases [BR:
cgib01003
]
O-Glycan biosynthesis
O-linked Gal type
127966275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
127966275
NCBI-ProteinID:
XP_052423121
LinkDB
All DBs
Position
B10:complement(8147550..8158155)
Genome browser
AA seq
591 aa
AA seq
DB search
MLTWIISVWSILVVAQCYFSEENYTEESKMQPPTVVIAIIARNAAHSLPYYLGALERLNY
PKERISIWAATDHNIDNTTLVLREWLTVMQTQYHYIEWRPSDKPTSYVGELGPKHWTNGR
YEYVMKLKQAALNFAKKRWADYILYSDTDNILTNPDTLHLLMAENKSVIAPMLDSQSAYS
NYWCGITPQGYYRRTAEYFPTKQRQRLGCYPVPMVHSTILLDLRKAGTKKVSFHPPHKDY
SWPFDDIIVFAFSCRISEVQMYLCNKERYGYLNVPAKPHQTVEDDRINFVHLYLESLIHG
PPMYLSRYVHVPPKRSDLMGFDEIYLINLRRRPDRRDRMLWSLYEMEIDAKVVDAIDGAA
LNSSDIKILGVDLLPGYYDPFSGRTLTKGEVGCFLSHYYIWKEMVDMQLDKALIFEDDMR
FQANFKRRLLRLMEEVEQVELDWDIIYLGRKKVNPEEEVPVENVRNLVYADYSYWTLSYA
ISLQGAQKLLNAEPISKMLPVDEFLPIMYDKHPNEDYKSHFPNRNLMAYSTHPLLVQPCH
YAGDPEWVSDTETSTLWDDDNVLTDWRGSYKTLKGSQPPAGLQSATYKDEL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgttaacttggatcataagtgtttggagcattcttgtggtagcacagtgttacttttcg
gaggaaaattataccgaagagtcaaagatgcagccacccacggtcgttatagctataatc
gcacggaacgccgctcattctttaccctactacctcggagctctcgagagattaaactat
cccaaagagcgcatctctatctgggcagcgacagaccacaacattgacaacacaacatta
gtcctgcgagaatggctcactgtcatgcaaacacaatatcactatatcgagtggagacct
tcagacaaacccacatcctatgtaggtgagctggggcccaagcactggactaacggccgc
tatgagtatgttatgaagctcaaacaggcagcgttgaactttgccaagaaacgctgggct
gactacattctgtattcagacacagacaacatcctgacaaacccggacacactgcacctc
ttgatggcggaaaacaagtcagtcattgcccccatgctggactcacagtcagcgtactcc
aactactggtgtggcatcactccacagggttactatcgtcgtactgctgagtactttccc
acaaaacagcgtcaaaggcttggctgctaccctgtgccgatggtccactccactattctg
ctggacctgcgcaaggcaggcaccaagaaagtgtcctttcacccccctcacaaagactac
tcctggccctttgacgacatcatcgtttttgccttctcctgccgaatatcagaggtgcag
atgtatctgtgtaacaaggagcgttacgggtatctgaacgtacctgcaaagcctcatcag
accgtggaggatgatcggatcaattttgtccacctttacctggaatctctgatccacggg
ccgccaatgtacttgtctcgctatgtccacgttcctcccaaacggtctgatctcatgggc
tttgatgagatctacctgataaacctgcgcagacgtccagaccgcagggacaggatgcta
tggtcgctgtatgagatggagattgatgccaaagttgtggatgctatagatggagcagct
ctgaacagcagcgatattaagatcctaggtgtcgatctcttacctggttactacgaccct
ttctccggccgcacgctgaccaagggagaggtgggctgcttcctcagccactactacatc
tggaaagagatggtggacatgcagctagacaaggcgctgatctttgaggacgacatgcgt
ttccaagccaactttaagcgtcgcctgctgcgtctgatggaggaggtggagcaggtggag
ctggactgggacatcatatacctgggcaggaagaaggtgaaccctgaagaggaagtccca
gtggagaatgtgaggaacctggtgtacgccgattactcctactggacgctgtcttacgcc
atctctcttcagggagctcagaagctcctcaacgctgaaccgatatccaagatgcttcct
gtggatgagtttctacccatcatgtatgacaagcaccccaatgaggactacaaatcccat
tttcccaatcggaatctgatggcgtactccacacacccccttctggtgcagccctgccat
tacgccggtgacccggagtgggtgagcgacacagagacctctacgctgtgggatgatgac
aatgtgctcacggactggagaggctcctataaaactctgaagggctctcagccaccggcc
ggcctgcagagcgccacctacaaggacgagttgtga
DBGET
integrated database retrieval system
