Carassius gibelio (silver crucian carp): 127966343
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Entry
127966343 CDS
T08819
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03015
mRNA surveillance pathway
cgib04261
Adrenergic signaling in cardiomyocytes
cgib04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127966343
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgib01009
]
127966343
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127966343
03036 Chromosome and associated proteins [BR:
cgib03036
]
127966343
Protein phosphatases and associated proteins [BR:
cgib01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
127966343
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
127966343
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
127966343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_Vps41
TYW3
Motif
Other DBs
NCBI-GeneID:
127966343
NCBI-ProteinID:
XP_052423215
LinkDB
All DBs
Position
B10:10401389..10421091
Genome browser
AA seq
448 aa
AA seq
DB search
MAGAGGGGNDVQWCFSQVKGAIDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQET
ENKSQSQFRSEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTI
KLWKISERDKRPEGYNLKEEDGRYRDAATITTLRVPVFRPMDLMVEASPRRVFANAHTYH
INSISVNSDNETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPHQC
NTFVYSSSKGTIRLCDMRASALCDKHSKLFEEPEDPSNRSFFSEIISSISDVKFSHNGRY
MMTRDYLSVKIWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGNDSVVMT
GSYNNFFRMLDRSQRRDVTLEASRESCKPRQVLKPRRVCAGGKRKKDEISVDSLDFNKKI
LHTAWHPQENIIAVATTNNLYIFQEKVN
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagccggaggcgggggaaacgatgtgcagtggtgcttttcacaagtgaaaggt
gcaatcgatgatgacgtagctgaagccgacatcatctctactgtggagttcaaccactca
ggggagctgctagccacaggggataaaggcggccgagttgtcatcttccagcaagagact
gagaacaagagtcagtcacagttccgtagtgaatacaatgtttacagcacatttcagagc
cacgagcctgagtttgactacctgaagagcttggaaatcgaggaaaagattaacaagatc
cgctggctaccacaaaagaacgctgcacaatttttgttgtccacaaatgataaaactata
aagttgtggaagatcagtgaacgtgacaagagaccagagggatacaatcttaaagaggag
gatgggcgctacagagatgctgctaccatcacaactctacgggtgccagtattcaggcct
atggatctcatggtggaggccagtccacggcgggtctttgccaacgcccacacctaccac
atcaactccatctcggtcaacagcgacaacgagacctatctgtctgcagacgacttgcgc
atcaacctgtggcacttagagatcactgaccgcagcttcaacattgtggacattaaacca
gccaacatggaggagctgacggaggtgatcacagctgcagagttccaccctcaccaatgt
aacacgtttgtctacagcagcagcaaaggcaccatccgcctgtgtgacatgcgtgcatca
gcactttgtgacaagcactctaaattgtttgaagaacctgaggaccccagcaaccgctct
ttcttttctgaaatcatctcctccatctcagacgtgaagttcagtcacaacggccgctac
atgatgacccgagactacctgtctgtcaaaatctgggatctcaacatggagaatcgaccc
gttgagacctaccaggtccatgagtacctcaggagtaagttgtgctctctttatgagaac
gactgcatcttcgataaattcgaatgctgctggaacggaaatgacagtgtggtaatgact
ggatcctacaacaacttcttccgaatgttggaccgcagccagcggcgggacgtcaccctg
gaggcttcgcgcgagagctgcaagccccggcaggtcctgaagccgcgcagggtttgcgcg
ggtggcaagcgaaagaaggatgagatcagcgtggacagcctggacttcaacaagaagatc
ctacacactgcctggcacccgcaggaaaatatcatcgccgtggcaaccaccaacaacctc
tacatcttccaggaaaaagtgaactaa
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