Carassius gibelio (silver crucian carp): 127966420
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Entry
127966420 CDS
T08819
Name
(RefSeq) PDZ and LIM domain protein 5-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127966420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgib04990
]
127966420
Domain-containing proteins not elsewhere classified [BR:
cgib04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
127966420
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
PDZ_2
zf-C3HC4_3
DUF3854
Motif
Other DBs
NCBI-GeneID:
127966420
NCBI-ProteinID:
XP_052423325
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All DBs
Position
B10:complement(24766077..24840001)
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AA seq
576 aa
AA seq
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MSNYSVSLSGPSPWGFRLQGGKDFSMPLTISRLTEGGKAAKAKISVGDVVLSIDGIATES
MTHLEAQNKIKACTGNLNLSLLRSSSITKTDTSKGEPQEIIKPVPISQTPGASTGPASIA
YNKTARPFGGTTNTVRSVSPKASIPSASSAFTPATPTQQHGHSPFANSSSTPSSGSSSPA
RVMAPPPAPVAPHSSVYNTPINLYSNENACEVALGQRRGLLESRAPGEQHNGSARQPVPD
PEGNHVSAVSDASKKRVIEDTEDWHPRSGTSQSRSFRILAQITGTENEPAQENRPGKNEA
TEELHPSSHATSSVKTVSTASAGALQKDNGVPPAAAESHQSSSAAGFPKAGAPAPQTGPS
MGRVSSKGPDRPAPQVHPSDQDSLVQRAEHIPAGTRTPMCAHCSMVIRGPFLVAMGKSWH
KEEFICSHCCSSLADVGFVEERGSVYCERCYEQFLAPTCFKCQQKILGEVINALKQTWHV
NCFLCTSCQQPISNNTFHLEDGRPYCETDYYTLFGTSCHGCDFPIEAGDKFVEALGFTWH
DTCFVCTVCSTSLEGQTFFSKKDKPLCKKHAHSVQF
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgagtaactacagcgtgtccttgagcggaccttcaccctggggcttcagactacagggt
ggcaaggacttcagcatgcctctcaccatctccagactgacagaaggaggaaaggcagcg
aaagccaagatcagcgtcggggacgtggtgctgtctatcgacggcatcgcaacggagagc
atgacacacctggaagcacagaataaaatcaaagcctgtacgggaaacctgaacctctcg
ctgctgagatcttccagtatcactaaaacagacacttcgaagggggaaccacaggagatc
ataaagccggtgcccatcagccaaacacctggggcctccaccggccccgccagcattgct
tataataaaaccgctcggccctttggtggaacgactaacacggtcagatcagtcagtccc
aaagcctccatcccctccgcctcgtctgccttcactccagccactcccacccagcagcat
ggccactccccctttgctaactcctcctccacaccgtcctctggctcctcctccccggcg
agagtgatggctccgcccccggcccccgtcgcccctcattcgtccgtctataacacgccc
atcaacctctactccaatgagaacgcgtgtgaggtggccttgggccagaggcgtggcctg
ctggagagcagagcccctggggaacagcacaacgggagcgctcgtcagcccgtgccggac
cccgaggggaatcacgtctctgctgtcagtgatgccagtaagaagcgtgtgatcgaggac
acggaggactggcatcctcgctctggcacgtctcagtcccgctccttccgcatcctggca
cagatcacgggcacagagaacgaaccagctcaggagaaccggccggggaagaacgaggcc
acagaggagcttcatcccagttcgcatgccacgtcttcagtcaaaaccgtgagcacagcg
tccgctggagccctgcagaaggacaacggcgtccctccagccgcagccgagagccaccag
tcgagcagcgccgcagggtttcccaaagcaggtgcacctgcgccgcagacggggccctcg
atgggacgggtcagcagcaagggcccggatcgacccgctcctcaggttcatcccagtgac
caggactcgctggtgcagagagccgaacacatcccggcgggaacacgcacacccatgtgt
gcacactgcagcatggtcatcaggggtccgttcctggtggcgatgggtaaatcgtggcat
aaggaggagttcatctgctctcactgctgcagttctctggcagacgtgggcttcgtggag
gagcgtggctctgtgtactgcgagcgctgctacgagcagtttctggccccgacctgcttc
aagtgccagcagaagattctgggggaagtcatcaatgccctgaagcaaacctggcatgtg
aactgcttcctgtgcaccagctgccagcagccaatcagcaacaacaccttccacctggag
gacggccggccgtactgtgagaccgattactacaccctgttcggcaccagctgtcacggc
tgtgacttccccatcgaagcgggcgataagttcgtggaggcgctgggcttcacctggcac
gacacctgcttcgtctgcacggtgtgcagcacgagtctggagggtcagaccttcttctcc
aagaaagacaagcccttgtgcaagaaacacgctcacagcgtccagttctga
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