Carassius gibelio (silver crucian carp): 127966476
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Entry
127966476 CDS
T08819
Name
(RefSeq) transcription factor SPT20 homolog isoform X1
KO
K21245
transcription factor SPT20 homolog
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127966476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgib03036
]
127966476
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
127966476
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt20_SEP
CCDC-167
Motif
Other DBs
NCBI-GeneID:
127966476
NCBI-ProteinID:
XP_052423437
LinkDB
All DBs
Position
B10:complement(18405149..18417362)
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AA seq
828 aa
AA seq
DB search
MQQVLEYALDRAEYIVESARQRPAKRRVSSSGRKSLYQKLYELYNEECEKEPELKKLRRN
VNLLEKLVSQESVSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLRYEETELLEYLDAEEL
PPILVDLLEKSQVNIFHCGCVIAEVRDYRQSGNAKMPTYQSRHILLRPTMQTLICDVHAM
TSDHHKWTQDDKLQLESQLILATAEPLCLDPSISVSCTTNRLLYNKQKMNTRSMKRCFRR
HSQAALNRQQEMMSHCPALPQLRLLDYLQRRKERKPAPSIDLKISKSGNCVDMWKQSSCQ
LTVPTEIDVEKYAVAENSVKLDDTQPTVWPAQDVRDDYIFDCEVGGQPQRTKVTIFQSMG
NPLVYGKIYSARDSKSEEDVADLHLIHPPFLIGSKTDADRFLTQYKEVYERDVKCQVKML
HHSGSTGSQGQPSPSRENEADGFSALVQSSVLGKGIKHRPPPIKLPAGSACASSGNPYST
QASSGHLKCPTPPPSKNQSLSRKHSMELGLLSPAALSPMQRSGTPKPSTPTPTNTPCSTP
HPADVQTATPSVTPTPQDPTLPQQPTLLTPFAQQQMTLPVMTIPLPTSSTTSSQVMTNPT
GLNFINVVGPVCSPQTLMSGSNPMLGCSPGTLASGIPLSGLLPSGGLMSGALPAAPAAGG
PFGLNNSPGLRPLNLLQLPTGPLIFNSLQQQQLSQFSPQQQSSQSATSSPQQQGDAADSG
LTAEQGLSAQQTAVINLTGVGGFMSPQTAVLSQLGCGLEGSGPSLPSPRLQQQHQPQIQL
QFLQHQMQQQQMGMAVGPAAQAALPRQHSANQPKSKRKRSTPQPLPRS
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagtcttagaatatgcattggatcgggctgagtatattgttgaaagtgctcgt
cagcgaccggcgaagagacgagtgtcctcgagtggaaggaaatccttatatcagaaactt
tatgaactgtacaatgaagagtgtgaaaaagaaccagagttgaagaaactgaggagaaat
gtgaatctactagagaagctggtctcacaggagtcagtctcatgtctggtggtcaacctg
taccctggaaatgaaggatactcacttatgcttagaggaaagaatggatccgattcagaa
acaatccgacttcgctacgaagaaacagagttactggagtacctggatgctgaggagctg
ccgcccatccttgtagaccttctagaaaaatcacaggtgaacatattccactgtggctgt
gtcatagctgaggtcagagactaccgacagtctggaaacgcaaagatgcccacctaccag
agccggcacatcctgctgagacccactatgcagaccctgatctgtgacgttcatgctatg
acaagtgatcaccacaagtggacacaggacgataaacttcagctggagagtcagctgatt
ctggccacagcagagcctctgtgtctggacccctccatctctgtcagctgcaccaccaac
cgtctgctctacaacaaacagaagatgaacacacgatccatgaaacggtgttttaggagg
cattctcaagcagctctgaacagacagcaggagatgatgagccactgccctgccctgcca
cagctgcggctcctggactacctccagaggaggaaagagaggaaacctgctccttccata
gacctcaagatctccaaatctggaaattgtgtggacatgtggaaacagagcagttgtcag
ctgactgtcccaacagaaattgatgtggagaaatatgcagtggcagagaactctgtcaaa
ctagatgacactcagcctactgtttggcctgcacaggacgtgagggatgactacatcttc
gattgtgaggtaggaggtcagcctcaaagaacaaaagtcactattttccagtctatgggg
aacccgctggtatatgggaaaatctacagcgccagagactccaaatcagaggaggatgtc
gcagacctgcacctcattcacccaccattcctcataggttcaaaaacagacgctgatcgg
tttctgacgcagtataaggaggtttatgaacgagacgtgaagtgtcaggtgaagatgttg
caccactcaggcagcacagggtcccaaggccagccgtccccctcaagggaaaacgaggct
gatggattctcagctctggtccagtcttcggttttaggaaaaggcatcaaacacagacct
cctcctatcaaactaccagccggctcagcatgcgcctcctcaggtaacccgtacagtaca
caggcctcaagcggccatctcaagtgcccgacccctccgccctccaagaatcagtctctc
tcccggaaacactccatggagcttggcctgctgtctcctgctgctctctcgcccatgcag
agatcaggtactcccaagccgtccacacccacacccaccaacacgccgtgttcaacgccc
caccccgccgacgttcagactgccacgccttcagtaacgcccacccctcaggaccccacc
cttccacagcagcccaccctgctgactcccttcgcccaacagcagatgaccctgcctgtc
atgacgattcccctgcccacgtccagcaccacatcctcacaggtcatgacaaaccccaca
gggctcaacttcatcaatgtggtgggcccagtttgcagtccgcagactctgatgagcggt
tccaacccaatgctgggttgtagtcctggtactctggcgtctggtatacccctgagtgga
cttctgccttctggtggtctcatgtctggagctcttcctgcagctccagcagcaggtggg
ccttttgggctgaacaacagcccgggactacgaccgctgaaccttcttcagctccctaca
ggaccactgatttttaactctctgcagcagcagcagttgtctcagttctcccctcaacag
caaagcagtcagtccgccacatccagcccccagcagcagggggacgcggctgattcgggt
ctgactgcagaacagggtctgtccgcacaacagacggcggtcatcaatctcaccggagtg
gggggattcatgtctcctcagacagcagtgctgtcccagctgggttgtggtctggagggg
tccgggcccagcctaccgtccccgaggctccagcaacagcaccagccacagatccaattg
caattcttgcagcaccaaatgcaacagcagcaaatgggtatggcagtggggccggcagca
caggcggcgctgccacggcaacattccgccaaccagccaaaaagtaagaggaaacgcagc
acgccacagcccctccccagatcatga
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