KEGG   Carassius gibelio (silver crucian carp): 127966512
Entry
127966512         CDS       T08819                                 
Name
(RefSeq) high mobility group-T protein-like
  KO
K10802  high mobility group protein B1
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03410  Base excision repair
cgib04140  Autophagy - animal
cgib04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    127966512
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    127966512
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cgib03036]
    127966512
   03400 DNA repair and recombination proteins [BR:cgib03400]
    127966512
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgib04147]
    127966512
Chromosome and associated proteins [BR:cgib03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    127966512
DNA repair and recombination proteins [BR:cgib03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     127966512
   MMR (mismatch excision repair)
    Other MMR factors
     127966512
Exosome [BR:cgib04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   127966512
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 HMG_box_5 MlaC
Other DBs
NCBI-GeneID: 127966512
NCBI-ProteinID: XP_052423497
LinkDB
Position
B10:complement(18994050..18997478)
AA seq 204 aa
MGKDPTKPRGKMSSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFE
DMAKQDKVRYEREMKNYIPPKGEKKKRFKDPNAPKRPPSAFFIFCSEFRPKVKEETPGLS
IGDVAKKLGEMWNKTSAEEKQPFEKKAAKLKEKYEKDITAYRSKGKVGGPAKAPSKPDKA
NDDDDEDDDDDDEEEDEEEDDDDE
NT seq 615 nt   +upstreamnt  +downstreamnt
atggggaaggatccaacaaaaccaagaggcaaaatgtcctcttacgcatactttgtccag
acctgccgagaggagcataagaagaaacaccctgaggcaacggtcaacttctctgagttt
tccaaaaagtgctcagagcgatggaagactatgtcagctaaggaaaaagggaagtttgaa
gatatggccaaacaagacaaggtccgttacgagagggagatgaaaaactacattccaccc
aaaggcgagaagaaaaagaggtttaaggaccccaatgctcccaagagacccccgtctgcc
ttcttcattttctgctctgagttccgacccaaggtgaaggaagagacccctggtctctcc
attggagatgtggctaagaaactgggtgagatgtggaacaaaacatcagctgaggagaag
cagccatttgagaagaaggcagccaagctgaaggagaagtacgagaaggacatcaccgcc
tatcgctccaaaggcaaagtgggaggtccagccaaggccccatccaagccagacaaggct
aatgatgatgatgacgaagacgatgatgatgatgatgaggaagaagatgaggaagaagat
gacgatgacgagtag

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