Carassius gibelio (silver crucian carp): 127966589
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Entry
127966589 CDS
T08819
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib00061
Fatty acid biosynthesis
cgib00071
Fatty acid degradation
cgib01100
Metabolic pathways
cgib01212
Fatty acid metabolism
cgib03320
PPAR signaling pathway
cgib04146
Peroxisome
cgib04216
Ferroptosis
cgib04920
Adipocytokine signaling pathway
Module
cgib_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
127966589
00071 Fatty acid degradation
127966589
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
127966589
09143 Cell growth and death
04216 Ferroptosis
127966589
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
127966589
03320 PPAR signaling pathway
127966589
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cgib01004
]
127966589
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgib04147
]
127966589
Enzymes [BR:
cgib01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
127966589
Lipid biosynthesis proteins [BR:
cgib01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
127966589
Exosome [BR:
cgib04147
]
Exosomal proteins
Exosomal proteins of breast milk
127966589
Exosomal proteins of breast cancer cells
127966589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
127966589
NCBI-ProteinID:
XP_052423693
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All DBs
Position
A1:5355010..5378250
Genome browser
AA seq
697 aa
AA seq
DB search
MQAQDLIRHLLIPELDDLRQYVRSLPTNTLMGMGAFAAITTYWLATRPKALKPPCDLDMQ
SVEVQGCRYARRSILQDSDTYMTYFYKDAQTMYEFFLRGLRVSNNGPCLGSRKPGKSYKW
LLYKEVADRAEFAGSALLHRGHSQTGDKYIGIFSQNRPEWTISELACYTYSLVAVPLYDT
LGTEAISHIIDKATISTVICDLPEKARLILDCVSGRKHSVTTIVIIGNFDSELTAQAQQK
GIEVLSLKELEAIGKANHKTPIPPKPEDLALICFTSGTTGCPKGAMITHGNVVSNCSAFI
KVTEGMLKLGPQDVLISFLPLAHMFQRVVEGVLLVQGARIGYFQGDIRLLMDDLKTLKPT
VFPVVPRLLNRMFDKIFGQANTPLKRWLLDFATSRKEAELKSGVVRKDSMWDKLIFSKVQ
ASLGGRVRFMITGAAPVSPTVLTFLRAALGCQFYEGYGQTECTAGCTLSLPGDWTAGHVG
APLPCNFVKLLDVPEMNYFAANGEGEVCVKGSNVFQGYLKDPEQTSEALDKDGWLHTGDI
GKWLPNGALKIIDRKKHIFKLAQGEYIAPEKIENIYIRSDPVAQVFVHGDSLQACLVGIV
VPDPDFLPGWAKKRGIVGSYTEMCKSKELKNAILEDMIQLGKEAGLKSFEQVRDIALHVE
MFSVQNGLLTPTLKAKRTELRKHFRQQLDQLYSKIKM
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcccaggatctgatccggcacctgttgatacctgagctggatgatttgaggcag
tatgtgcgcagtttacccaccaacaccctcatgggcatgggcgcattcgctgccatcacc
acatactggctggccactcgtcctaaagcacttaaaccaccctgtgacctcgacatgcag
tctgtggaggtacagggctgtagatatgctcgtcggtccattctgcaggacagtgacaca
tacatgacatacttctataaagacgctcagacaatgtatgagtttttcttaagaggacta
cgagtgtcaaataatggtccttgtttgggatcacgaaaaccgggcaagtcatataaatgg
cttttgtataaagaggtagcagacagggcagagttcgcaggatcagcattactccacaga
ggacacagtcaaacaggagacaaatacattggcatcttttcacagaacagaccagagtgg
acgatttcagagctggcgtgttacacatattcactggtggcagtgccgctgtatgataca
cttggtacagaggccatcagccatatcattgataaagccaccatctccactgtgatctgt
gacctcccggagaaggctcgtctgatcctggactgtgtgtctggccgcaagcacagtgtc
acaaccatagtgatcatcgggaactttgacagtgaattgacagcacaagcacaacagaaa
ggcattgaggtcctaagcctcaaggagctggaggctattgggaaagctaaccacaagact
cccattcctcctaagccagaggacctggcactgatttgtttcacaagtggaactacagga
tgtccaaagggagcaatgatcacacatggaaacgttgtttccaattgttccgctttcatt
aaagttactgaggggatgctgaaacttggtcctcaagatgttctaatctccttcttacca
ctagcgcacatgtttcaaagggtagtagagggtgtgcttttggtccagggggccaggatt
ggatattttcagggtgatatccgtctactgatggatgatttgaagactcttaagcccact
gtattccctgtagtgcccagattactcaaccgcatgtttgataagatctttggacaggcg
aacactcctctcaaaagatggctgctggattttgctaccagtaggaaagaggcggagctt
aaaagtggagttgtgaggaaggatagcatgtgggataaactgatcttcagcaaagtgcag
gccagtttgggtggacgtgtgaggttcatgatcacaggagctgctcctgtctctcccacc
gtcctcaccttcctgcgagcagcgctgggctgccagttttatgagggttatgggcagaca
gagtgtacggcaggctgcactttgtcacttcctggagattggacagcaggtcatgtggga
gcaccgctgccctgtaacttcgttaaactattggatgtgcctgaaatgaattattttgca
gcaaatggagagggagaggtgtgtgtgaaaggctcaaatgtgtttcaaggttacctgaag
gacccagagcagacctcagaggccttagataaagatggctggctgcatactggagacatc
ggcaaatggctcccgaatggggctctgaagattatagacaggaagaaacacatcttcaag
ctggctcagggtgaatacattgctccagagaagattgagaacatctacatccgcagtgac
cctgtggctcaggtctttgttcatggagacagtctgcaggcatgtttagtgggtattgtg
gttcctgatccagactttctgccaggatgggcaaagaaaagaggcattgtgggctcctac
actgaaatgtgcaaaagcaaggaactgaaaaatgccatcctagaggatatgattcagctg
ggcaaggaagccggactgaaatcctttgaacaggtgagagacattgccctgcacgtggaa
atgttctctgttcagaatggactcctcacgccaacactgaaagcaaagagaaccgagctg
agaaaacacttcagacagcagttagaccagctctactctaaaatcaaaatgtga
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