Carassius gibelio (silver crucian carp): 127966736
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Entry
127966736 CDS
T08819
Name
(RefSeq) very low-density lipoprotein receptor-like isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127966736
Membrane trafficking [BR:
cgib04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
127966736
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Motif
Other DBs
NCBI-GeneID:
127966736
NCBI-ProteinID:
XP_052423907
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All DBs
Position
B10:7131564..7150706
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AA seq
876 aa
AA seq
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MVTSTLGLVILSVCLQLCGFARGSQPECEQSQFQCGNGRCIPSVWQCDGDLDCSDGSDET
SCVRKTCAEVDYVCRSGQCIPKRWQCDGEPDCEDGSDESIEMCHTRTCRVNEFSCGIGST
QCIPVFWKCDGEKDCDNGEDEVNCGNITCSPLEFTCASGRCVSRNFLCNGEDDCGDGSDE
QDCAPASCGPSEVPCGNNTCIPRSWLCDDDVDCQDQSDESPERCGRNPTPPAKCSPNEMQ
CGSGECIHRKWRCDGDPDCKDGSDEKNCSARTCRPDQFKCDDGSCVHGTRQCNGFRDCAD
GTDEVNCKNLTQCKGPDQFKCRSGECIEMSKVCNKVRDCADWSDEPIKECNMNECLINNG
GCSHLCLDLTIGYKCDCTLGLQLIDRKTCGDVNECLNPGICSQICINLKGGYKCECHNGY
QMDPTTGVCKAVGKEPCLIFTNRRDIRKLGLERREYTQIVEQLRNTVAVDADFVQQTIFW
ADMGQKAIFSTVLDKQEASHMKVIDNIQMPVGIAVDWIYKNIYWSDLGSKSIAVANFNGT
KRKVLFNSGLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGIDRQVLVETDIQWPNGI
TLDLIKGRLYWVDSKLHMLCSVDLNGDNRRKVLQSPDYLAHPFALTVFEDRVFWTDGENE
AIYGANKYTGSEVTLLASNLNEPQDIIVYHELIQLSGTNWCNEKLENGGCSFMCLPAPQV
NKHSPKFTCVCPQGQTLGSDGLHCRPEAPTAVPRDVGRVTPHPSHPKASAMPKVSSEPVW
AEGNISTSIHEVNSSAKGSAAAWAILPVLLLAMAAAGGYLMWRNWQIKNKKSMNFDNPVY
LKTTEEDLNINISRHGASVGHTYPAISMVNTEDDLS
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgtctactctggggctcgtcattctgtctgtctgtcttcagctgtgtggattc
gcgcgcggttcccagccagaatgtgagcagtctcagttccagtgtgggaacggccggtgc
atcccgtctgtgtggcagtgcgacggtgacctggactgctcggacgggagcgacgagacg
tcctgcgtgaggaagacctgtgcggaggtggactacgtctgccgcagtggccagtgcatt
cccaagagatggcagtgcgacggggaaccagactgtgaggacggctcagatgagagcatt
gaaatgtgccacacgaggacctgccgagtgaacgagttcagctgtggcatcggctccacg
cagtgcattccagtcttctggaagtgtgacggtgagaaagactgcgacaacggagaggac
gaggttaattgtgggaacattacatgctctcctctggagttcacctgtgccagtggccgc
tgtgtttctcgtaatttcctctgtaatggtgaggacgactgcggggacggcagcgacgaa
caggactgtgctcctgcctcctgcggcccgagtgaagtcccgtgcgggaataatacctgc
attcctcggagctggctgtgcgatgacgatgtggactgccaggaccaatcagacgagtcg
ccagagcgttgcggacgcaaccccacaccgccggctaagtgttcgcccaacgagatgcag
tgtggctctggggaatgcatacacaggaagtggcgctgtgacggggatccagactgcaag
gacggcagcgacgagaaaaactgctctgcccgtacctgcagacccgaccagttcaagtgt
gatgacggcagctgtgtccatggcacccgacagtgcaacggattcagagattgtgctgac
ggcacggatgaagtcaactgcaaaaacctaactcagtgtaaaggtcctgaccagttcaag
tgtcggagtggagagtgtattgagatgagtaaagtgtgtaataaggtccgtgactgtgct
gactggagtgatgaacccatcaaagagtgcaatatgaacgaatgcctaatcaataatgga
ggctgttcgcacctctgccttgacctgacgattggctacaagtgtgactgcacactagga
ctccagctcatcgatcgcaagacctgtggtgatgtcaatgagtgcctcaaccctggtata
tgcagtcaaatatgtataaatctcaaaggcggatacaaatgtgaatgtcacaatggctac
cagatggaccccacgactggagtatgcaaggctgtaggtaaagagccctgtcttattttt
accaatcgaagagacatccgtaaactaggactggagcggcgtgaatatactcagattgtg
gagcagctgcggaacacagtagctgtagatgcggacttcgttcagcagacgatattctgg
gctgacatggggcagaaggcgatttttagcacagtattggataagcaggaggcaagtcat
atgaaagtgattgacaacattcagatgcctgttgggattgcagtggactggatttacaaa
aacatatattggtcagacctgggcagtaagagtatagcagtggccaacttcaatgggacc
aagaggaaggtactctttaacagcggcctgaaagaaccagcctctattgctgtagatcct
ctatcagggttcctgtattggtcagactggggcgaaccagctaaaattgagaagtctggt
atgaatgggattgacagacaggtcctggtagagacagacattcagtggcccaatggaatc
actctcgatctgatcaagggccgactctactgggtggattcgaagctgcacatgctttgt
agtgtagacttgaatggagacaaccgccggaaggttctgcagtcaccagactacctggcc
cacccttttgcccttactgtttttgaggatcgagtgttctggacagacggtgagaatgag
gcaatctatggtgcaaacaagtacacaggatctgaagtaactctgctggccagcaacctc
aatgaaccccaagacatcattgtgtaccatgagctaattcagctgtctgggaccaactgg
tgtaatgagaagttggagaacggaggctgttccttcatgtgcctgccagctccacaagtt
aacaaacattcccctaaattcacctgcgtttgtcctcaaggtcaaaccctcggctcagat
ggcttgcactgcagaccagaggcacctactgccgtcccccgagatgtagggagggtgacc
cctcaccccagtcaccctaaagcatctgcaatgccgaaggtttcctctgaaccagtttgg
gctgaaggaaacataagcacctctatacatgaagtaaattcatcagccaaaggatctgct
gctgcctgggctattctacctgtgttgttattggccatggctgcagcgggtggttactta
atgtggcgcaactggcagatcaaaaataagaagagcatgaacttcgataatccagtatat
ctgaagaccacagaggaagacctcaatatcaatatcagcagacacggcgcttctgtaggc
cacacgtaccctgctatttcgatggttaacacagaagacgacttgtcataa
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