Carassius gibelio (silver crucian carp): 127966797
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Entry
127966797 CDS
T08819
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3A-like isoform X1
KO
K05213
glutamate receptor ionotropic, NMDA 3A
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04020
Calcium signaling pathway
cgib04080
Neuroactive ligand-receptor interaction
cgib04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
127966797
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127966797
04082 Neuroactive ligand signaling
127966797
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
127966797
Ion channels [BR:
cgib04040
]
Ligand-gated channels
Glutamate (ionotropic)
127966797
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Terminase_4
Motif
Other DBs
NCBI-GeneID:
127966797
NCBI-ProteinID:
XP_052424030
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All DBs
Position
B10:complement(5773643..5792415)
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AA seq
1094 aa
AA seq
DB search
MMLLVPPASLAHPQPCQILKRIGHTVRVGALHLQPRVFRLDSLRGRDTDWEADRETWEQW
DTMTQSGHERGWSGIRTKSSANNPHKAFKSKSALKQVGPDTVFLPRDSVLLATQTLNRVA
GLLPYNLSLEIVMAVEAGLGELPAFSFSSSSTPACADPVSFLQSVCHTVIVQGVSAIVAF
PQNRDELVMLEFIATTLQIPVISVVQSEFKRQCQNSLHFQMALQNPQTAQADLIFSLLSM
NNWYDVSLVMCQQMNISDFVFLLHNNSKFHLGTVLKISTNGSSKSDFQMSLQVQLESIKD
STSTIVTFGCDIRDIRRIFTTIAKFGLILPDYHWIIGDSQNVEVLRTEGLPMGLIAHGGM
GEPSLDHYVQDALELVARAVGSAAIVSPELALIPGITNCLASPETKNLTSGAFLSRYMAS
MSFDGLSGYINVQEESTIISESHHFIWNLQQDPIGKPMWTRLGSWKQGKLVMDYRVWPNK
RHSQAGVDWRHSSRLHLRVVTLVEHPFVFTRDVDEEGLCPAGQLCLDPLTNDTSLLENLF
QGLQGANDSVSMALKKCCYGYCIDLLEKLAEDMGFDFDLYIVGDGKYGAYKNGRWTGLVG
DLMSGAAHLAVTSFSINSARSQVIDFTSPFFSTSLGILVRTRDTAAPIGAFMWPLHWSMW
LGIFVSLHVTAVFLTLYEWKSPFGMTPRGRNRDRVFSFSSALNVCYAILFGRTASIKPPK
CWTGRFLMNLWAIFCLFCLSTYTANLAAVMVGEKTYEQLSGIHDPKLHHPSQGFRFATVR
ESSAEDYVKKSFPEMYEYMRRYNVPATPDGIDLLKDDPQKLDAFIMDKALLDYEVSIDAD
CKMLTVGKPFAIEGYGIGLKQNSPLTSNISELVSQYKSDGFMDMLHDKWYKVVPCGKRSF
AVTETLQMGIKHFSGLFVMLCVGVALSLLTTLGEHIVHRWLIPRMHQSSQHKYWLHTSQR
LHRALNPTFKEDKLQTVAKLEKSCNVGNNQQMPLNSLGTSNCNRRTLSSQDGQRNDLECS
HCKELLSPQDKRQLPLQTTSNGRTDLLGLSQNPIVQELTDLETQIQLIKKQLQLAIKKKK
ELEQYQKTKTSTES
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgatgcttcttgttcccccagcatctctggcacatccacagccatgtcagattctgaag
aggatcggacacacggtgagagtcggagctctgcacctgcagcctcgagtgttcaggctg
gattcactcagagggagagacacggactgggaagcagacagagaaacgtgggaacagtgg
gacacgatgacccaaagtgggcacgaacgaggatggagtggtatcaggactaaaagctca
gcgaataacccacacaaggccttcaaaagtaaaagcgcactcaaacaagtgggtccggac
actgtgtttctacctcgagactctgttctgctcgctacacagactctcaatcgagtggcg
gggcttttaccttacaacctcagccttgagatagtcatggccgtggaggcaggactgggg
gaattacctgctttctccttttcctcctcatctacacctgcctgcgcagatcccgtgtcg
ttcctgcaaagtgtttgccacactgtcatcgtgcaaggagtttctgccatcgtcgcgttc
ccacagaacagggacgagctggtgatgctggaatttatcgccacgacgctacagattccg
gtcatcagcgtcgtccagagcgaattcaaacgccagtgtcagaactctctccatttccag
atggccttgcaaaaccctcaaaccgctcaagcagatctcatcttctccctgctgtccatg
aataactggtatgatgtcagtctggtgatgtgtcaacagatgaatatttcagactttgtt
ttcttgctccataacaactccaaatttcatctggggacagtcctcaagatatccaccaat
ggtagctccaaaagtgactttcagatgtccctacaagttcagcttgagtccattaaggac
tcgacatctactatagtgacctttggatgtgacatcagggatatacggagaatcttcact
acgattgcaaagtttggtctgattctacccgattaccattggattataggagactctcag
aatgtggaggtattgcggacagaggggcttcccatgggtcttattgcacatggtggtatg
ggtgagccctcgctggatcattatgtccaggacgctttagagctggtggcacgagcggtg
ggatcggctgccattgtgtctccagaactggcactgattcctggcatcacaaattgcctg
gcaagccctgagactaaaaatctcacatccggagcctttctgtccagatacatggccagc
atgtcttttgacggcctaagtggctacatcaatgttcaggaggaatcaaccatcatctct
gaaagccatcacttcatatggaatctccagcaggacccaataggcaagcccatgtggaca
cgtctcggcagctggaagcaaggcaaactggttatggattatagagtttggcctaacaag
agacattctcaggcaggagtggactggcggcattcctctcgtctacacttgcgcgtcgtc
accctggtagaacatccgtttgtcttcacccgagacgttgatgaagaaggcttgtgcccg
gctggccagctgtgccttgacccactaacaaatgacacatccttattggaaaaccttttt
cagggtttgcaaggtgccaacgacagtgtctccatggcgttaaaaaaatgttgttatgga
tattgcattgatcttttggagaagctggcagaggacatgggcttcgactttgacctctat
atcgtgggagatgggaaatatggagcttacaagaacggtcgctggacggggctggttggg
gacctcatgagtggagcggcacatctggccgtcacttcctttagcatcaactcagcacgc
agtcaggtcatcgacttcaccagccccttcttctccaccagtctgggaatcctcgtcagg
actagggataccgccgcacctatcggcgctttcatgtggcccctgcactggagtatgtgg
ctgggaatatttgtgtctttacacgtgacggccgtgttcctgaccttgtacgagtggaaa
agccctttcggcatgactccgaggggaaggaacagggaccgtgtcttttctttctcctct
gcgctaaacgtttgctacgcaatcttattcggcaggactgcctccattaagccaccgaag
tgttggaccggcagattcctcatgaacctctgggccatattctgtctgttctgcctttca
acgtacacggctaatctcgccgctgtcatggttggtgagaaaacctacgagcaactctca
ggtatacatgatcccaagctccaccatccatcacaaggtttccgctttgcaaccgttcgg
gagagcagcgctgaggactatgtgaaaaagagcttcccagagatgtatgaatacatgaga
cgttataatgtccctgcaacccctgatggtatagatcttcttaaggatgatccccaaaag
ttggatgcttttataatggacaaagcacttttagactatgaagtgtctattgatgcagac
tgcaagatgctgacagtgggaaagccttttgcgattgaaggatatggcattgggctcaaa
cagaactctcctctcacctcaaatatctctgagctggtcagtcagtacaaatctgatgga
tttatggacatgctgcatgataagtggtataaggtggtaccctgcggtaaaagaagcttc
gcagtcactgagacgttacagatgggtataaagcacttctcagggttatttgtcatgcta
tgcgttggagtggccctgtctctgctcaccacactgggtgaacacattgtccatcgctgg
ctgatacccagaatgcatcagtcatcacagcataaatactggcttcacaccagtcaaaga
ttacatcgagcacttaacccgactttcaaagaagacaaattacagactgttgcaaaactg
gagaaaagctgcaatgttggaaacaaccaacaaatgccgttgaactctttgggaacctcc
aactgcaacagacgaacactgtccagtcaagatggacaacgaaatgacctggaatgttct
cactgtaaagagctgctgtccccacaggacaagagacaacttccgttacagaccacatcg
aacggaagaaccgacttgctgggcctttcccagaaccccatagtacaggaactgacagac
ctggaaacacaaatccagcttatcaaaaagcaactacagcttgccataaagaagaaaaaa
gagctggaacagtatcagaagacaaagacatcgaccgagtcctag
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