KEGG   Carassius gibelio (silver crucian carp): 127967760
Entry
127967760         CDS       T08819                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03030  DNA replication
cgib03410  Base excision repair
cgib03420  Nucleotide excision repair
cgib03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    127967760
   03410 Base excision repair
    127967760
   03420 Nucleotide excision repair
    127967760
   03430 Mismatch repair
    127967760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cgib03032]
    127967760
   03036 Chromosome and associated proteins [BR:cgib03036]
    127967760
   03400 DNA repair and recombination proteins [BR:cgib03400]
    127967760
DNA replication proteins [BR:cgib03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    127967760
  DNA Replication Termination Factors
   ELG1-RFC complex
    127967760
Chromosome and associated proteins [BR:cgib03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    127967760
DNA repair and recombination proteins [BR:cgib03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     127967760
  Check point factors
   HRAD17(Rad24)-RFC complex
    127967760
SSDB
Motif
Pfam: Rep_fac_C AAA RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA_16 AAA_assoc_2 AAA_22 AAA_11 AAA_30 AAA_14 Mg_chelatase AAA_5 DUF815 AAA_24 SLFN-g3_helicase RuvB_N AAA_19 Kinesin Gp44_lid AAA_28 ResIII AAA_7
Other DBs
NCBI-GeneID: 127967760
NCBI-ProteinID: XP_052424374
LinkDB
Position
B11:complement(25227196..25231281)
AA seq 358 aa
MQAFLKGSSSQSVKAQKPSSSSSSSAAEKKKSAPWVEKYRPKCVDEVAFQEEVVAVLKKS
LEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVIREKVKR
FAQLTAAGARPDGKPCPPFKIIILDEADSMTGAAQAALRRTMEKESRTTRFCLICNYVSR
IIEPLTSRCSKFRFKPLANDIQQERLLQICGKENLKYTAEGIEALVKVSEGDLRKAITYL
QSASRLNTDQEITEQIIVEIAGVVPPKVIEALLQICYRGTFEKLELAVKDMIDQGYAANN
ILNQLHDVIIDEKLSDKQKSVITEKMAEVDKCLSDGADEYLQLLSLCSVIMQQATHST
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgcaggcgtttctgaaaggatcttcgtcacagagtgtaaaagctcagaaaccgtcctct
tcatcatcttcatcagctgcagagaagaagaagagcgcgccctgggtggagaaatacagg
ccgaagtgtgtggatgaagtagccttccaggaggaggtggttgcagtactgaagaagtct
ctagagggcgctgatctgcccaacctgctgttttatggccctcctggaaccggaaagacg
tccaccatcctagcggccgccagagagctttatgggcccgagctgtaccgtcagagggtg
ctggagctgaatgcgtctgatgagcgagggatacaggtgatccgagagaaggtgaagcgc
ttcgcacagctgaccgcagccggagcacgtccagacgggaagccctgtcctccgtttaag
atcatcatcctggacgaggcggactcgatgaccggtgcagctcaggcggctctcagacgc
accatggagaaagagtctcgcaccacacgcttctgcctcatctgcaactacgtcagccgg
atcattgagccgctgacctccagatgctccaagttccgcttcaaaccgctggccaatgac
atccagcaggagcgactgctgcagatctgtgggaaggagaacctgaagtacaccgcagag
ggcatcgaggcgctggtgaaggtgtcggagggagatctcaggaaggccataacttacctc
cagagcgcctccagactcaacactgatcaagagatcacggagcagatcatcgtggagatc
gctggggtggttcctcccaaagtgatcgaggcgctcctccagatctgctacagaggcacg
tttgagaagctggagctcgctgtgaaggacatgatcgatcagggatacgcagccaacaac
atcctcaaccagttacacgacgtcatcatcgacgagaagctgagcgacaagcagaagtct
gtcatcactgagaagatggctgaggtggataagtgtctgtcagacggcgcagacgagtat
ctgcagttactcagtctctgctccgtcatcatgcagcaggccacacacagcacctga

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