Carassius gibelio (silver crucian carp): 127967760
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Entry
127967760 CDS
T08819
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03030
DNA replication
cgib03410
Base excision repair
cgib03420
Nucleotide excision repair
cgib03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127967760
03410 Base excision repair
127967760
03420 Nucleotide excision repair
127967760
03430 Mismatch repair
127967760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgib03032
]
127967760
03036 Chromosome and associated proteins [BR:
cgib03036
]
127967760
03400 DNA repair and recombination proteins [BR:
cgib03400
]
127967760
DNA replication proteins [BR:
cgib03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
127967760
DNA Replication Termination Factors
ELG1-RFC complex
127967760
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
127967760
DNA repair and recombination proteins [BR:
cgib03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
127967760
Check point factors
HRAD17(Rad24)-RFC complex
127967760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_16
AAA_assoc_2
AAA_22
AAA_11
AAA_30
AAA_14
Mg_chelatase
AAA_5
DUF815
AAA_24
SLFN-g3_helicase
RuvB_N
AAA_19
Kinesin
Gp44_lid
AAA_28
ResIII
AAA_7
Motif
Other DBs
NCBI-GeneID:
127967760
NCBI-ProteinID:
XP_052424374
LinkDB
All DBs
Position
B11:complement(25227196..25231281)
Genome browser
AA seq
358 aa
AA seq
DB search
MQAFLKGSSSQSVKAQKPSSSSSSSAAEKKKSAPWVEKYRPKCVDEVAFQEEVVAVLKKS
LEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVIREKVKR
FAQLTAAGARPDGKPCPPFKIIILDEADSMTGAAQAALRRTMEKESRTTRFCLICNYVSR
IIEPLTSRCSKFRFKPLANDIQQERLLQICGKENLKYTAEGIEALVKVSEGDLRKAITYL
QSASRLNTDQEITEQIIVEIAGVVPPKVIEALLQICYRGTFEKLELAVKDMIDQGYAANN
ILNQLHDVIIDEKLSDKQKSVITEKMAEVDKCLSDGADEYLQLLSLCSVIMQQATHST
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttctgaaaggatcttcgtcacagagtgtaaaagctcagaaaccgtcctct
tcatcatcttcatcagctgcagagaagaagaagagcgcgccctgggtggagaaatacagg
ccgaagtgtgtggatgaagtagccttccaggaggaggtggttgcagtactgaagaagtct
ctagagggcgctgatctgcccaacctgctgttttatggccctcctggaaccggaaagacg
tccaccatcctagcggccgccagagagctttatgggcccgagctgtaccgtcagagggtg
ctggagctgaatgcgtctgatgagcgagggatacaggtgatccgagagaaggtgaagcgc
ttcgcacagctgaccgcagccggagcacgtccagacgggaagccctgtcctccgtttaag
atcatcatcctggacgaggcggactcgatgaccggtgcagctcaggcggctctcagacgc
accatggagaaagagtctcgcaccacacgcttctgcctcatctgcaactacgtcagccgg
atcattgagccgctgacctccagatgctccaagttccgcttcaaaccgctggccaatgac
atccagcaggagcgactgctgcagatctgtgggaaggagaacctgaagtacaccgcagag
ggcatcgaggcgctggtgaaggtgtcggagggagatctcaggaaggccataacttacctc
cagagcgcctccagactcaacactgatcaagagatcacggagcagatcatcgtggagatc
gctggggtggttcctcccaaagtgatcgaggcgctcctccagatctgctacagaggcacg
tttgagaagctggagctcgctgtgaaggacatgatcgatcagggatacgcagccaacaac
atcctcaaccagttacacgacgtcatcatcgacgagaagctgagcgacaagcagaagtct
gtcatcactgagaagatggctgaggtggataagtgtctgtcagacggcgcagacgagtat
ctgcagttactcagtctctgctccgtcatcatgcagcaggccacacacagcacctga
DBGET
integrated database retrieval system