Carassius gibelio (silver crucian carp): 127967766
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Entry
127967766 CDS
T08819
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5-like
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgib03036
]
127967766
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127967766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
PHD_2
DEAD
Chromo_MIT1
HMG_box
Motif
Other DBs
NCBI-GeneID:
127967766
NCBI-ProteinID:
XP_052424387
LinkDB
All DBs
Position
B11:14370026..14401783
Genome browser
AA seq
2002 aa
AA seq
DB search
MPGSLSNEDEGQDDMDFEDDVPDEDEEGERRRSVPLSPLERFFSEDDSVKQHKNKKPSKI
MEGKEPKVKKKKKKEGLPSGLDDMSDREDHGHRSGSESSTYSSLKKKKKKPKEKKERKTK
QRKKDDDEDDDDDDDGNLKEPKSSSQLMQEWGLEDVQYAFSEDDYKTITNYKAFSQFLRP
LIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGTSATAVAAAVAAAVETVNVAPPICIRS
VQQISPSGPIKKAKTKEGKGPGAKKKSKPAKETKKKGKSKKSKSKAGQGGKRKKGSSSEE
DFLDDFSDFDDISIHSASVRSDTSAAPKKKSARQGRKKRKREDGDGYETDHQDYCEVCQQ
GGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDDEEEEDEVAGEEE
DDHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMCPPLKGKVQKI
LHWAWSDPPLPPEVPLGRDGEKVDGLSKMPLKGRPERQLFVKWAGLSYWHCSWVSELQLE
LYHAVMYRNYQRKNDMDEPPPYDYGSGEEELNSEKRRSKDPQYAAMEERFYRYGIKPEWM
IIHRIVNHSFDKDGDVHYLIKWRDLPYDQCTWEADDFDIPDYDSFKQAYWDHRNQVLGES
HNPLLFRKGKNLKEEGKRREPPPDSPIVDPTIKFEQQPWYIDETGGTLHPYQLEGLNWLR
FSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA
PDFYIVTYIGDKDSRAVIRENEFTFEDSTVKSGRKVFRMKKDTPIKFHVLLTSYELITID
QAVLGSITWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEELFHLLNF
LTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVEL
SPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNG
SYDGNLLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDFLEFEGYKYERIDG
GITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFS
RAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSKQELDDI
LKFGTEELFKDDVEAARAMAGDNKEGEEGSVIHYDDNAISKLLDRSQDATEDTEIQNMNE
YLSSFKVAQYVVREEDGEEEVQREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGK
RIRKQVNYNDASQEDQEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRRHSRRQLRSDRD
KPLPPLLARVSGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFR
AYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKFS
TPDLIPVGLELKKLTESVSSDPSTPVPASPVPTQPSTPVPSEKTESVSGSQEDKEITEPE
STKSLDPEQPVMPEPSTAPEKTSEAEEPKSGSPEGKVMEESEKNDTPIVHSEPSSNQPQP
PSKPSEQSSNQTPSDCGKEKETSSERAENKPSPAKIDDKEQKPVSEAIPDDVKSEGPPEN
QLNGEKDSRDDVDESHRDDKNSVKTRFMFNIADGGFTELHTLWQNEERAAVSSGKMYDIW
HRRHDYWLLAGIVTHGYARWQDIQNDPRYAILNEPFKTEMHKGNYLEMKNKFLARRFKLL
EQALVIEEQLRRAAYLNMTQDPGHHAMALNTRFAEVECLAESHQHLSKESLAGNKPANAV
LHKVLNQLEELLSDMKADVTRLPSMLSRVPPVSARLQMSERGILSRLTSRGNEPPPQQPF
PQGSFGCSQMYNSGFAGGFRGPGGTAMVNYSQMPLGPYVSVSSNGPPGPSSHLEKKTNDA
LRDVATPDLKSGKPSDVICIED
NT seq
6009 nt
NT seq
+upstream
nt +downstream
nt
atgcccggatcgctaagcaatgaagatgaggggcaagacgatatggattttgaggacgac
gtgccagatgaggatgaggaaggtgaacgtcggaggagtgttcccttgtcacccttagag
aggttcttctctgaggatgattcggttaaacaacataagaacaagaaacccagcaagata
atggagggaaaggagccaaaagttaagaaaaagaagaagaaggaggggcttcctagtggg
ctagatgacatgtcagacagagaggatcatggtcacaggtcaggaagtgagagcagcacc
tacagctccctgaagaagaaaaagaaaaagcccaaagagaagaaggagaggaagacaaaa
cagcgaaagaaagatgatgatgaggacgatgatgatgacgatgatggaaacttaaaggag
ccaaagtcatcaagtcagctgatgcaagagtggggtcttgaagatgtgcagtatgccttc
tcagaggacgactataaaaccataaccaactacaaagccttcagccagtttcttagacct
ctcattgccaagaagaaccccaagatccccatgtcaaaaatgatgacggtgcttggagca
aagtggagagagttcagtgcaaacaaccctttcaaaggcacctctgcaactgctgtagcg
gctgccgtagctgcagctgtggaaactgtcaatgtggctccgcccatctgtattagaagt
gtccaacagatctcaccatctggcccaatcaaaaaagccaaaaccaaagagggaaagggg
cctggcgctaaaaaaaaaagtaagccagcgaaagaaacaaaaaagaaagggaaatcgaag
aagtccaaatcgaaagcaggccagggcggaaaaaggaaaaaaggctcttcgagcgaggag
gatttcctggatgacttttcagactttgatgacatcagcattcacagtgcctctgtacgc
tcagacacttcagcggcacccaaaaagaagtcagcccgccaaggacgaaaaaaaagaaaa
agagaggatggagacggctacgagacagaccatcaagattactgtgaggtttgtcagcag
ggaggagagatcattctatgtgacacctgtcccagagcatatcacctggtgtgtctggat
ccagaactggagaaagcccccgagggcaaatggagctgcccccactgcgaaaaagaaggc
attcagtgggaggccaaagatgacgaggaggaggaagatgaggttgctggtgaggaggaa
gatgaccacatggagttctgcagagtgtgtaaggatgggggagagctgctgtgctgtgac
acctgcccttcctcctaccacatccactgtctcaacccaccccttcccgaaattcccaat
ggagaatggctttgtccacgatgcatgtgtccgccgctaaaaggcaaagtccagaagatt
ctgcattgggcgtggagcgatcctcctcttccacctgaggttccccttgggcgagatgga
gagaaggtggatggtttgtccaaaatgcccctgaagggtcgtccagagaggcagctgttt
gtcaaatgggctgggctgtcctactggcactgctcctgggtcagcgaactacagttggag
ctatatcatgcagtaatgtaccgtaactaccagcggaagaacgacatggacgaacctcca
ccatacgactatggctctggggaggaggaacttaacagcgagaagaggaggagcaaagac
cctcagtatgcagccatggaggaacgattctaccgttacggcatcaagccggagtggatg
atcattcaccggatcgtcaaccacagttttgataaggatggagatgtacactacctgatt
aagtggagagatctgccgtatgatcagtgcacctgggaggctgatgactttgacatccca
gattatgacagctttaaacaagcctactgggaccacaggaatcaggtgctcggtgaaagc
cataaccccctactgttcagaaagggaaagaacctcaaagaggaaggaaagaggagagaa
cctccaccagactctccaattgtggatcctaccatcaagtttgaacagcagccatggtac
attgatgaaacagggggaactttgcacccataccaactggaaggcctgaactggttgcga
ttctcttgggcccaaggaactgacacaatcttggctgatgaaatggggcttggcaagact
gtgcagactatagtgttcctgtactcactctacaaagagggtcactccaaaggaccattt
ctggtcagtgcgccactctccaccatcatcaactgggagagagagtttgagatgtgggct
ccggatttctacattgtgacttacataggggacaaagacagcagggctgtcatacgtgag
aatgaatttaccttcgaggacagcaccgtcaaatcaggtcgcaaggttttccgcatgaag
aaggacacaccgataaagtttcatgtcctgctgacgtcatatgaactgatcaccatcgat
caggcagtacttggctccattacctgggcctgtttggttgtggatgaagcccaccgactg
aagaataaccaatcaaagtttttcagaattctgaatggctacaaaatctactataagctg
ctcctgactggaacccctttgcagaacaatctcgaagagctttttcacctgctcaacttt
ctcaccccggagcgcttcaataacctggagggctttctggaggagtttgcagacatctca
aaagaggaccagattaagaaactacatgacctgctggggccacacatgctcaggagactg
aaggcagatgtgtttaaaaacatgccggcaaaaactgagcttatagtgcgagtagagctc
agcccaatgcagaagaaatactacaagttcattttaacacgtaactttgaggcactgaat
tccaagggaggagggaaccaggtgtctcttcttaacatcatgatggacttgaagaaatgc
tgcaaccatccctacctgtttccagtggctgcagtggaagctccagtcttacccaatggt
tcttatgatggcaacctcctggtgaaatcctcaggaaaactcaccctgcttcagaagatg
ctcaaaaaactgaaagatgaagggcacagggttctcatcttctctcagatgacaaagatg
ctagatctgctagaggacttcctggagtttgagggttataaatacgagcgtattgatggg
ggcatcacaggggggctgcgacaggaggccatcgatcgctttaacgcacccggggctcag
cagttctgttttctactgtctacacgtgctggaggattgggtatcaatctggcaaccgca
gacacagtgatcatatatgactctgactggaaccctcacaatgatattcaggcatttagc
agggcacatcgtatcgggcaaaataaaaaggtgatgatctatcgctttgtaactcgggca
tccgtagaggagcgtattacccaggtagccaagcgaaagatgatgttaacccatctggtg
gtgcgtcccggcttggggtccaagacgggctccatgtccaaacaggaactagacgacatc
ctcaagtttggcactgaggagctttttaaagatgacgttgaagccgccagagcgatggcg
ggagataataaagaaggagaggagggcagtgtgatccactacgatgataacgccatatcc
aaactgctggaccgtagccaggatgccaccgaagacacagagatccagaacatgaacgag
tacctgagctcattcaaggtggctcagtatgttgtgagagaggaggatggagaggaagag
gtccagagggagattattaagcaggaagagaatgttgatccagactactgggagaagctc
ttgaggcaccattacgagcaacagcaggaggatttggcacggaacctgggcaaagggaaa
cgcatccgcaaacaggtcaactataatgacgcctctcaggaggaccaagagtggcaggat
gatctttcagataatcaatctgagtactccgtcgggtccgaggatgaggatgaagatttt
gaggaacgtcctgaaggaggacgcagacattctcgcagacagttgaggagcgatcgggac
aaaccattgcctccgttgctggctagagttagtggaaacatagaggttttgggatttaac
gcccggcagcggaaagccttcctgaatgcaattatgcgctggggtatgcccccacaagat
gccttcaactctcactggctggtccgtgacctgagagggaaaagtgagaaagagttcagg
gcttatgtatctctgttcatgaggcacctgtgtgagccaggggcagatggagcagagaca
tttgcagatggagtcccgagggaaggcctatcccgccaacatgttctcacccggatcggt
gtcatgtctctggtccgcaagaaggttcaggagtttgagcatgtgaatgggaagtttagt
acaccggatttgattcctgtgggattggagctgaaaaaacttacagaaagtgtctcgtcg
gaccccagtacgcctgttcctgccagtccggttccgactcaacccagcacacctgttcct
tcagaaaagacagagtcagtgtccggttctcaagaagacaaggagattacagaaccagag
agtaccaaatccctggaccctgagcagccagttatgccagaaccctccacagcaccagag
aagaccagtgaggcagaagaaccaaaaagcggaagtccagaaggaaaagtaatggaagag
agtgagaagaatgacacccctattgtccattcagagccatcgtccaatcaaccacagccg
cccagtaagcctagtgagcagtcatccaatcagacaccttcagactgtggtaaagagaaa
gaaacgtcttcggagagagcggaaaataaacccagcccagcaaaaatagatgataaggag
caaaaaccagtttctgaagccattcctgatgatgtaaaatctgaaggccctcctgagaac
caactgaatggagagaaagactcaagggacgacgtggatgagagccacagagatgataag
aacagcgtcaagactcgtttcatgtttaacatcgcagatggaggattcacagaattgcac
acgctatggcagaacgaggagcgcgcagctgtatcatctggcaaaatgtacgacatctgg
caccgtcgccatgactactggctgctagctggcatcgtaacacatggctatgcccgctgg
caggacattcagaacgacccacggtacgccatcctcaatgagcctttcaagactgaaatg
cacaaagggaactacttagaaatgaagaataaatttcttgccagacgttttaagctcctg
gaacaggctttggtaattgaggagcagcttcggcgtgcggcatacctgaatatgactcag
gatcccggtcaccacgccatggccctcaacacacgtttcgcagaggtggagtgcctggct
gagtcccatcagcacctctccaaagagtcactggctggtaacaagccagccaatgctgtg
ctgcacaaagtgttgaatcagctggaggaactgttaagcgatatgaaggctgatgtgacg
cggttgccctccatgctttcgcgggtcccacccgtgtccgcccggctccagatgtccgag
cggggcatcctcagcagactcaccagccggggcaacgagccgccacctcagcagcctttc
cctcagggctctttcggctgttctcagatgtataatagtggtttcgccggagggttccgt
ggacctggaggcactgcgatggtgaactacagccagatgcccctggggccgtacgtcagc
gtgtcctcaaacggacctccgggcccaagcagtcacctagagaagaagaccaatgatgct
ctgcgagatgtggccacacctgatctgaaatcaggcaaacctagtgatgttatatgcatt
gaggactag
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integrated database retrieval system
