Carassius gibelio (silver crucian carp): 127967849
Help
Entry
127967849 CDS
T08819
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2
KO
K14793
ribosomal RNA-processing protein 9
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgib03009
]
127967849
Ribosome biogenesis [BR:
cgib03009
]
Eukaryotic type
90S particles
Other 90S particles
127967849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_IP5PC_F
PEP5_VPS11_N
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_WDR75_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
DUF5836
WD40_like
Ntox15
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
127967849
NCBI-ProteinID:
XP_052424545
LinkDB
All DBs
Position
B11:10943362..10949886
Genome browser
AA seq
471 aa
AA seq
DB search
MSSFFIKKKVISSAPNKGDLKRKSNADDGKGRSKKFSKRMDEEISSDSENESAEPNRKQQ
ENEDDEIEETPQEKKLRLAKLYLEQLREEEDTKAEQESFEADLISGRLQEDVLEQKGKLQ
RLIAKELIAPDPAEIRLLRGHKLPVTCLVITPDEKYIFSASKDCSIIKWEVESGKKVQKI
AGGRKGTEARHVGHTAHVLCMAISSDGKYLASGDMNRLIMIWDPMTCKHLYKFKGHRDAV
SGLAFRRGTYTLYSASHDRSIKVWSVDENAYVETLFGHQDMITGLDCLSRERCVTAGGRD
RTVRVWKIAEESQLVFHGHEGSIDCIQLINEEHMVTGGDDGSISIWTVNKKKPVSTVKQA
HGSHGNKGLEQPYWVSSVAALHNSDIVASGSHNSAVQLWKCGQGFRGLEPLFSVPMTGFV
NSLKFSNSGKFLVAGVGQEHRLGRWWRIKEARNGIYIIPLKRQAQEQEVVQ
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctttctttataaagaaaaaggtcatctcttcggctcctaataaaggagattta
aaaagaaagagtaatgcagatgatggcaaaggccggtcaaagaagttcagtaagcgaatg
gatgaagaaatatcgagtgactcagagaatgaaagtgctgaaccaaacagaaaacaacag
gaaaacgaagacgacgagatcgaggagacgccgcaagagaagaaacttcgcctggccaaa
ctctacctggagcagctgagagaggaagaggacacgaaggctgagcaggagtcatttgaa
gcggacctcatctctgggagactgcaggaggatgtgctggaacagaaaggcaaacttcaa
agactgatagccaaagaactcatagctccagacccagcagagatcaggttgttgagagga
cacaaactacccgtcacatgtctcgtcatcacccctgatgagaaatacatcttctctgcg
agcaaagactgctccatcatcaaatgggaggtggagagcgggaagaaggtgcagaagatc
gcaggaggacggaagggaaccgaagcgcgtcatgtgggacacaccgctcacgtcctgtgt
atggccatatcatctgatgggaaatacctggctagtggagacatgaatagactcatcatg
atctgggatccgatgacatgtaaacatctgtacaagtttaaaggacaccgagatgctgtg
tctggtttggcctttagacgagggacttacaccctttacagcgcgtcacacgaccgctca
ataaaagtgtggagcgtggacgagaacgcttatgtagaaaccctgttcggccatcaggac
atgatcacagggttggactgtttgagccgagagagatgcgtgactgcaggaggacgagac
aggacggtccgagtgtggaaaattgctgaagaatcacagcttgtctttcatggacacgag
ggctccattgattgtatccagcttattaatgaagaacacatggtcacaggtggagatgat
ggctctatatctatttggacggttaataagaagaagccggtgagcacagtgaagcaagcc
cacggtagccatggcaacaagggtctggagcagccctactgggtgtcttctgtggcggcg
ctgcacaactctgacatcgtggcctcaggctcccataattcagcggtgcagctgtggaag
tgtgggcagggattcagaggcctggagccgctcttcagcgtccctatgactggatttgtc
aacagtctgaagttctcgaactctgggaagtttctcgtggcgggagttggacaggagcac
agattgggccgatggtggagaataaaggaagccaggaatggaatatatatcattcctctt
aaaagacaagctcaagagcaagaagttgtccagtaa
DBGET
integrated database retrieval system