KEGG   Carassius gibelio (silver crucian carp): 127968025
Entry
127968025         CDS       T08819                                 
Symbol
si:dkey-13a21.4
Name
(RefSeq) ras-related protein Rab-7a isoform X1
  KO
K07897  Ras-related protein Rab-7A
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib04137  Mitophagy - animal
cgib04140  Autophagy - animal
cgib04144  Endocytosis
cgib04145  Phagosome
cgib04148  Efferocytosis
cgib05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    127968025 (si:dkey-13a21.4)
   04145 Phagosome
    127968025 (si:dkey-13a21.4)
   04140 Autophagy - animal
    127968025 (si:dkey-13a21.4)
   04137 Mitophagy - animal
    127968025 (si:dkey-13a21.4)
   04148 Efferocytosis
    127968025 (si:dkey-13a21.4)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    127968025 (si:dkey-13a21.4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cgib04131]
    127968025 (si:dkey-13a21.4)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgib04147]
    127968025 (si:dkey-13a21.4)
   04031 GTP-binding proteins [BR:cgib04031]
    127968025 (si:dkey-13a21.4)
Membrane trafficking [BR:cgib04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    127968025 (si:dkey-13a21.4)
Exosome [BR:cgib04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127968025 (si:dkey-13a21.4)
  Exosomal proteins of other body fluids (saliva and urine)
   127968025 (si:dkey-13a21.4)
  Exosomal proteins of colorectal cancer cells
   127968025 (si:dkey-13a21.4)
  Exosomal proteins of bladder cancer cells
   127968025 (si:dkey-13a21.4)
GTP-binding proteins [BR:cgib04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    127968025 (si:dkey-13a21.4)
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA MMR_HSR1 RsgA_GTPase GTP_EFTU AAA_5 AAA_16 IIGP AAA_7 AAA_24 AAA_29 DAP3 AAA_33 NACHT
Other DBs
NCBI-GeneID: 127968025
NCBI-ProteinID: XP_052424832
LinkDB
Position
B11:complement(16405959..16407773)
AA seq 204 aa
MTEWSTPHLKVILIGNSGVGKSSFMSRFVHHRFTNLYRATIGVDFLTKEITIDKRSVILQ
IWDTAGTERFHSLGTTLYRGAHCCLLVFDVTSSVSFDALDVWKKEFLVQACPSDPSAFPF
IVLGNKIDLDYREVSSSKAQQWCTEIGAEYFECSAKEDICVDTTFHSAARAALQYLIRHH
VENGEDIQITQKQQEKQPNKKCYC
NT seq 615 nt   +upstreamnt  +downstreamnt
atgacagagtggagcacaccacacttgaaagtcattcttattggaaactctggagtggga
aagtcttcatttatgagccggttcgtccaccatcgctttactaacttgtatcgtgccaca
atcggggtagatttccttacgaaagaaatcactattgataaaagatcagtgattcttcag
atctgggacactgcaggaacagagaggtttcactctctgggtaccacactgtaccgtgga
gctcactgctgccttctagtgtttgatgttacctcatccgtctcctttgatgcactagac
gtctggaagaaagagttcctggtgcaggcatgtccctcggacccctctgcattccctttc
atagtcctcggcaataaaattgacctggattatcgtgaggtgtcttctagcaaagcccag
cagtggtgcactgaaatcggagctgaatattttgaatgtagtgccaaggaagacatttgc
gtggacaccacttttcacagtgcggcacgagcagccctgcagtatctcataagacaccat
gtggaaaatggagaggacatccagattacacagaaacaacaggagaagcagccaaataaa
aaatgctattgttga

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