Carassius gibelio (silver crucian carp): 127968026
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Entry
127968026 CDS
T08819
Name
(RefSeq) red-sensitive opsin
KO
K04251
long/medium wavelength-sensitive opsin
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cgib04030
]
127968026
G protein-coupled receptors [BR:
cgib04030
]
Rhodopsin family
Vision
Opsin
127968026
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srv
7TM_GPCR_Srsx
7TM_GPCR_Srt
TctB
MpPF26
TMEM154
DUF3810
Motif
Other DBs
NCBI-GeneID:
127968026
NCBI-ProteinID:
XP_052424834
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Position
B11:complement(16373474..16375877)
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AA seq
357 aa
AA seq
DB search
MAEQWGDAIFAARRRGDETTRESMFVYTNSNNTRDPFEGPNYHIAPRWVYNLATVWMFFV
VVASTFTNGLVLVATAKFKKLRHPLNWILVNLAIADLAETLLASTISVTNQFFGYFILGH
PMCIFEGFTVSVCGIAGLWSLTVISWERWVVVCKPFGNVKFDAKWASAGIIFSWVWSAIW
CAPPIFGWSRFWPHGLKTSCGPDVFSGSEDPGVQSYMIVLMITCCIIPLAIIILCYIAVW
LAIRTVAQQQKDSESTQKAEKEVSRMVVVMIFAYCFCWGPYTFFACFAAANPGYAFHPLA
AAMPAYFAKSATIYNPIIYVFMNRQFRVCIMQLFGKKVDDGSEVSTSKTEVSSVAPA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcagtggggagatgcaatcttcgcagctaggcgaaggggagatgaaacgacg
agggaatcaatgtttgtatatacaaacagcaataacaccagggatccctttgagggaccc
aactaccacattgcccctcgatgggtgtacaacctagcaacagtgtggatgttctttgtg
gtcgttgcgtcgaccttcaccaatggcctggtgctggtggccacagccaaatttaagaag
ctccgtcaccctcttaactggatcctggtcaacctcgctatagctgatctagcagagaca
cttttggccagcaccatcagtgtcaccaaccagttttttggctactttatcctcggacac
cccatgtgtatttttgaaggcttcaccgtgtctgtatgtggtatcgctggtctgtggtct
ttgactgtcatctcttgggaaagatgggtggttgtctgcaaaccatttggaaatgtcaag
tttgatgctaaatgggcatctgctggtatcatcttctcctgggtttggtctgctatctgg
tgtgcaccacccatctttggctggagcagattctggcctcatggtctaaagacctcctgc
gggcctgatgtcttcagcggaagtgaggaccctggtgtccagtcctacatgattgtcctg
atgatcacctgctgtatcatccctctggccattatcattctctgctacattgctgtgtgg
cttgccattcgtactgtcgcccagcagcagaaggattctgagtccacgcagaaagcagag
aaggaagtgtccagaatggtggttgtcatgatctttgcctactgtttttgctggggacca
tacacattctttgcatgctttgctgctgcaaacccaggctatgccttccacccactggca
gcagccatgcctgcctactttgccaagagcgccaccatctacaaccccattatttatgtc
ttcatgaaccgacagttccgtgtatgcatcatgcagctctttggaaagaaggtagatgat
ggttccgaggtgtctacatccaagacagaagtgtcctctgtggctcctgcataa
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