Carassius gibelio (silver crucian carp): 127968061
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Entry
127968061 CDS
T08819
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
127968061
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgib02000
]
127968061
Transporters [BR:
cgib02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
127968061
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
127968061
NCBI-ProteinID:
XP_052424895
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Position
B11:5399768..5424102
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AA seq
617 aa
AA seq
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MTAEKTIPIINGKADDSMDPEAASSSAARSNDKKVVNERGQWNNKIEFMLSVAGEIIGLG
NVWRFPYLCYKNGGGAFFVPYVIFFICCGIPVFFLETALGQFTSEGGITCWRKVCPLFEG
IGYATQVIEAHLNVYYVVILAWAIFYLFNCFTTELPWASCGHYWNTENCVDFNNESIANF
TNPYATSPVMEFWERRVLSISSGIEEVGSLRWELAICLAIAWVICYFCIWKGPKSTGKVV
YVTATFPYFMLLILLIRGITLPGAANGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAICL
GCLTALGSYNSYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQNVPIEAVAESG
PGLAFIAYPKAVTMMPWAPLWACLFFMMLIFLGLDSQFVCVESLVTAIIDMYPKTFRVGY
RRELLILGMSVASFFLGLIMLTEGGMYVFQLFDSYAASGMCLLFVAIFESICIGWVYGSD
RFYSNIEDMIGYKPVFFIKWCWKFFTPGICAGIFLFFLIKYKPLKYNNVYTYPDWGYAIG
WMMAMSSMVCIPLGILFQIWKTEGTFRERIKKLTTPSSDLIMRGRLSSRGPCAINDSDAK
MRADGKISTITEKETHF
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgaaaagacgattcccataataaatggaaaagcggacgattcgatggacccc
gaagcggcgagctcgagcgcagcgcgcagcaatgataagaaggtggtgaacgagagagga
cagtggaataataagattgagtttatgctgtcagtggctggagagattatcggccttggc
aacgtttggaggttcccatatctgtgttacaagaacggcggaggtgctttctttgtgcct
tatgtcatcttcttcatctgctgtggtatcccagtcttcttcctggaaacagcgctaggt
cagttcactagtgaaggaggcatcacatgttggcgaaaagtctgcccgctctttgaaggc
attggctatgcgacccaagtcatcgaagcccacctgaatgtttattatgtggttatatta
gcttgggccattttctacctgttcaattgctttacaacagagctaccctgggcatcgtgt
ggtcactactggaacacggagaactgtgtggattttaacaatgaaagcattgccaacttc
accaatccatatgccacatcaccagtcatggagttttgggaacgccgtgttctcagcata
tcatctggaattgaagaagttggcagccttcgctgggaactggctatctgtcttgctata
gcctgggtcatatgttatttctgcatttggaaaggtcccaaatcaactggaaaggttgtg
tatgtcactgcaacctttccttatttcatgctgttgatccttcttattcgtggaataacg
ctgccaggagctgctaatggaattaagttctacctgtatcctgacatctctcgtctgtca
gaccctcaggtgtgggtggatgcaggcactcagatcttcttctcatatgcgatatgtctg
ggctgtcttacggctctcggcagctacaacagctacaacaacaactgctacagggactgc
atcatgctgtgttgtctgaacagtggcacaagttttgtggcaggatttgccatcttctct
gtcttgggcttcatggcatatgaacagaatgtgccaatagaggcagtggcagaatcaggt
cctggtctagcgttcatagcttatcctaaagctgtgaccatgatgccttgggctccattg
tgggcctgcctgttcttcatgatgctcatcttccttgggcttgatagtcagtttgtgtgt
gtggagagtcttgtgactgcaatcatagacatgtatcccaaaaccttccgtgtgggttat
cggcgagagcttctcatcctgggaatgtctgtggcttcgttcttcctgggtctaataatg
ctgacagagggtggcatgtacgtgttccagctctttgactcgtatgcagccagtggcatg
tgtctgttgtttgtggccatctttgagtccatctgcattggctgggtctatggcagcgac
cggttttattcgaacattgaggacatgattggatacaagcctgtcttcttcatcaaatgg
tgctggaagttcttcacaccaggcatctgtgctggcatctttctgttcttcttgatcaag
tacaaacctctgaagtataataatgtgtacacatatccagactggggttatgccattggc
tggatgatggccatgtcctctatggtctgcatccctctgggaatcttatttcagatctgg
aagacggaaggaactttccgtgagaggatcaagaagctgaccacacccagctctgacctg
ataatgaggggacgcctcagctccaggggtccctgcgctatcaatgactctgatgccaaa
atgagggcggatggcaagatctccaccatcacagagaaggagacacatttctaa
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