Carassius gibelio (silver crucian carp): 127968062
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Entry
127968062 CDS
T08819
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1b
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
127968062
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgib02000
]
127968062
Transporters [BR:
cgib02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
127968062
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
127968062
NCBI-ProteinID:
XP_052424897
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Position
B11:5462392..5471356
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AA seq
599 aa
AA seq
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MATNGTKASDGHVLTELNEAPTANDKPKTLVVKVQKKKELPDRETWQGKFDFLLSCVGYA
IGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLETSLGQYTSIGGLGVWKLAPM
FKGVGLAAAVLSFWLNIYYIVIIAWAIYYLYNSFTTDLPWKSCDNPWNTEKCFSNYSMAN
TANMTSAVVEFWERNMHQLTDGLEKPGEIRLPLAITLAIAWVLVYFCIWKGVGWTGKVVY
FSATYPYFMLFILFIRGVTLPGAKEGILFYITPEFSKLKESEVWLDAATQIFFSYGLGLG
SLIALGSYNPFNNNVYKDSIIVCCINSFTSMFAGFVIFSIVGFMAHITKRPIADVAASGP
GLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALIDEFPRSLRGRRE
IFIAVVCFVSYLIGLSNITQGGLYVFKLFDYYSASGMCLLFLVFFECISISWFYGVNKFY
GNIEEMIGYKPCIWWKLCWVAFTPLIVAGVFLFSAVQMVPLKMNNYVFPKWGQGVGWCMA
LSSMILIPGYMVYLFLTLKGSYKERLRIMTQPTVVVRTQENGPEQQPENPTPANDEAYI
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggccacgaacggcacgaaagcatccgatggacacgttttaacagagctgaacgaagcg
cccaccgccaacgacaaaccaaaaactctggtggtgaaagttcagaagaaaaaggaactt
cccgacagagaaacatggcagggaaaatttgactttcttctgtcttgtgttggctatgcc
attggacttggcaatgtctggagatttccctatctatgtggaaaaaacggaggaggggcg
ttcttgattccttactttttgaccctcatatttgctggggtcccgttgtttcttctggaa
acttccctcggtcagtacacgtccattggtggtcttggagtgtggaaactggcccctatg
ttcaaaggtgttggcctggcagcagcagtcctgtcgttctggctcaacatttactacata
gtcataattgcttgggcaatttactacctgtataactcattcaccactgatctcccctgg
aaatcgtgtgacaacccttggaatacagaaaaatgcttctcaaactacagcatggcaaac
accgccaatatgacgagcgccgtggtggagttctgggaacgtaacatgcatcaactgact
gatggtttggaaaagccgggagagataagactgccactagcaataacactggccattgcc
tgggttctggtctatttttgtatctggaagggagtaggctggactggaaaggtggtatat
ttctcagcaacatacccatacttcatgctgtttattctgttcatccgtggagtgacgctg
cctggagcgaaagaaggcattttgttctatatcacgcctgagttcagcaagctgaaagaa
tccgaggtgtggctggatgcagccactcagatcttcttctcttacggtctgggcctgggc
tctctgatcgccctcgggagctacaaccctttcaacaataatgtttacaaagactctatc
atcgtctgctgcatcaattccttcaccagtatgttcgccggattcgtcattttctctatc
gtaggtttcatggcccacatcacaaagcggcccatagcagacgtggctgcctcagggcca
gggctggcgttcttagcctacccagaggcggtcacacagctgcccatctcaccgctctgg
gcaatcctgtttttctccatgttgcttatgcttggcattgacagtcagttctgtacggtg
gagggattcatcactgctctcattgatgagttcccccgctctctacgaggaagacgagag
atctttatcgctgttgtctgcttcgtgtcttatttgattggcctgtcaaacatcacacag
ggtggcctctatgtgttcaaactgttcgactattattctgccagtggaatgtgtctgctg
ttcctggtgttcttcgaatgcatctccatatcctggttctatggtgtcaataaattctac
ggcaacattgaggagatgattggatacaagccctgcatttggtggaagctgtgctgggtc
gcattcacccctctgattgtggcgggtgtgttcctgttcagtgccgttcagatggtcccg
cttaaaatgaacaattatgtgttcccaaagtgggggcaaggtgtaggctggtgcatggcc
ctgtcgtccatgattcttatcccaggatacatggtctacttgttcctcaccctgaagggc
tcatataaagagcgccttcggatcatgactcagcccacggtggtggtccggactcaagag
aacggaccagaacagcaacctgaaaaccccactccagccaatgacgaggcctacatctag
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