Carassius gibelio (silver crucian carp): 127968079
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Entry
127968079 CDS
T08819
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16 isoform X1
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgib03021
]
127968079
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
127968079
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_IFT140_1st
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
WD40_CDC20-Fz
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_EML_2
DUF2018
ASA1
DUF6802
Motif
Other DBs
NCBI-GeneID:
127968079
NCBI-ProteinID:
XP_052424917
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All DBs
Position
B11:complement(21592557..21600868)
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AA seq
847 aa
AA seq
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MMEIAYVCEWEKRPKSNHCPSIPLVCAWSCRNLIAFTTDLKNEEDDKGLDNAFITNIITP
VDLSHMIHVIDTDHPWDVNSINSGHNEVISCLEWDQSGSRLLSADGDGQIKCWGMTEHLV
NSWECTQSSSVDGDPIVALSWLHNGVKLALHVEKSGSTNFGEKFSRVKFSPSLTLFGGKP
MEGWLAVTVSGLVTVSLLKPNGTLLTASESLCRLRGRVALADIAFTGGGNIVVAATDGSS
SSPVQFYKVCVSVVNEKCRIDTELLPSLFMRCTTDPVRRDKYPAVTHLKFLTRENSEQVL
LCASSQMGSIVECWSLRKEGLPVNNIFQHRSPVVGEKQPMILKWRILSATNDLDRVSAVA
LPKLPISISNTDLKVASDTKFFPGLGLALAFHDGSIQILHRLSLHTMGVFYGSSGSSQRV
GEEPAIKRQRAGGPTLHFKALQFSWTSLALVGVDNHGKLHMIRVSPSMGQMLDMNTLLRH
LLFLLEYCMVTGYDWWDVLLHAQPSMVHNLLEKLHEEYMRQNQALQQVLSTRIVAVKASL
CKLSSATAARACDFHAKLLLIAISSTLKSLLRPHVLNTPDKSPGDRLSEICAKNTDTDID
KVMINLKTEEFVLDGPPLQSLQQLIQWVGDFVLYLLANLPNQGSIVRPGFGFLRDGASLG
MLREMLVMIRIWGLLKPGCLPIYTATSDNQDSMFLLFRLLTKLWLCSRDESHPQDPDETL
IDECCLLPSQLLVPSMDWLPINDGVITKVQSKHPLRLQFGKPYTLPGVNPNAQVEVFRSP
ASQRMDHLRCLHLGISPTEDSKACTRCGCVTMLRSPNKTNAMRQWEQRWIKNCLCGGLWR
RIPSTLT
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgatggagatcgcgtatgtttgcgagtgggagaagagacccaagagcaatcactgcccg
tccatccctttggtgtgcgcctggtcctgtagaaacctcatcgccttcaccacggacctg
aagaatgaggaggatgacaaaggtctggacaatgcctttattaccaatattatcacacct
gttgatctgagtcatatgatacacgtcattgacactgatcacccctgggatgtgaactcc
atcaactctggtcacaatgaggtcatttcctgcctggaatgggaccagtcgggttcgagg
ctgttgtctgctgatggagatggtcagatcaagtgttggggaatgacagagcacctggtg
aacagctgggagtgcacacagagcagctcagtggacggagacccgatcgtagccctctca
tggttacacaatggagttaaactcgccctgcatgttgaaaagtctggctctacgaacttt
ggagagaagttttcccgggtgaagttctctccctctctcacgttgtttggagggaagccc
atggagggctggttagcggtgacggtgagtggtctggtgaccgtgtcactgttaaagccg
aacgggaccctgctgacggccagcgagagcctgtgcagactgaggggccgcgtggcgctg
gctgacatcgccttcacaggcggcgggaatatagtggtggcggccaccgatggcagcagc
tcttctccggtgcagttctataaagtgtgtgtgagcgtggtgaacgagaagtgccgcatc
gacaccgagctcttgccctcgctattcatgcgctgcaccaccgaccccgtccggagagac
aaataccccgctgtcactcaccttaaattcctcacacgcgaaaactccgaacaggtgctg
ctctgtgcgtccagtcagatgggcagcattgtagagtgctggtccttgcggaaggagggt
ctcccagttaataatatctttcaacaccgatcacctgtggtgggtgaaaagcagccgatg
attctgaagtggcgtatcctctcagcgaccaatgatctggaccgtgtgtctgctgtcgct
ctgcctaaactccccatctccatttccaacactgatctcaaagtcgcctcagataccaag
ttcttcccaggcctcggtcttgccctggccttccatgatggcagcatccagattctccat
cgcctttccctgcacaccatgggagtgttctacggttcctctggttcctcccagcgtgtg
ggagaagaacctgccattaaacgtcagagagccggcggcccgacgctgcacttcaaagcc
cttcagttctcctggacatctttggctctggtgggagtggacaatcatgggaagttgcac
atgatccgagtgtctccatccatgggccaaatgttggacatgaacacactcctgcggcac
ctgctgttcctcctggagtactgcatggtgacggggtacgattggtgggacgtgctgctg
cacgcgcagccgagcatggtgcataaccttctggagaagcttcatgaggagtacatgaga
caaaaccaagcgctccagcaggttctgtccacccgtatagtggcagtgaaggcgtctctg
tgtaaactctcctctgccactgcagcaagagcctgtgacttccacgctaaactgctcctc
atcgccatcagctccacgctgaagtctttactgagacctcatgtgctcaacacccccgac
aagagtcccggagaccgtctctctgagatctgtgccaaaaacactgacaccgatattgat
aaggtgatgatcaacctgaagacagaggagtttgttctggacggaccacccctgcaatcc
ctccagcagctcattcagtgggtgggagactttgttctttatctactggccaacctgccc
aaccagggctccatcgtgcgtccagggtttgggttcctgcgggacggagcgtctctgggc
atgctccgagagatgctggtgatgatccgtatttggggcctgttaaaaccaggctgtttg
cccatctacacggccacatctgacaaccaagacagcatgtttctgctcttccgcctgctc
accaaactctggctttgctctcgagatgagagtcacccgcaggaccctgatgagacgttg
attgatgagtgctgtctgctgcccagtcagctcctggtacccagcatggactggctgccc
atcaacgacggtgttatcactaaggtccagagcaaacacccactcagactgcagttcggc
aaaccgtacaccctgcccggagtcaaccctaacgcacaggtggaggtgttcagaagtcca
gcatctcagaggatggaccacctgcgatgtttacatttgggcatctctccaacagaggac
agcaaagcctgcaccaggtgtggctgtgtcaccatgctgagatccccaaataaaaccaac
gccatgagacagtgggagcagcgctggatcaagaactgtctgtgtggaggtctctggaga
agaatcccctccacactaacataa
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