Carassius gibelio (silver crucian carp): 127968081
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Entry
127968081 CDS
T08819
Name
(RefSeq) guanine nucleotide exchange factor DBS isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127968081
Membrane trafficking [BR:
cgib04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
127968081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
CRAL_TRIO_2
PH
SH3_9
SH3_1
SH3_2
PH_10
Spectrin
GlutR_dimer
Motif
Other DBs
NCBI-GeneID:
127968081
NCBI-ProteinID:
XP_052424922
LinkDB
All DBs
Position
B11:complement(21034824..21091674)
Genome browser
AA seq
1251 aa
AA seq
DB search
MLCRLEEEEEMSLLELQQRVDCIITHVDEIMQQEIRPLLAVDIIEQLHRQFALLSGGRGK
DGSPIITFPEFSGFNEVSDEDFVNVVTYLTSIPSMDAASIGFIIILDRRKDKWNAALASL
SRIAGSFPGNLQLVLVLKPSRLLQRAIADVSMRLHKDDFKLKVPIVMLNSLSDLHGYIDK
GQLTCDLGGTLDYCHSQWIHHRTAVENFALTVKSTAQMLQKFGTDLAETELPNDVQCTKD
LLITHTEKHDKLQDELKMAIKQGNTLLSCIKEQASKAESHILNPDEVENQTTAERLLAQL
DETENAFEQFWSRHHLKLEQCLQLRHFEQDFREVKVSLDGLMETLLGLSDTGDCVARVEH
LLGDLKTLEDKAQESLEKAQLHAQHGDQLIQSDHYAVDSIRPKCVELRRICDDFSNEAKK
KRDILTKSLEIHKRIDEVNQWCETGVYLLASQAVDRCQTQEGAEAALQDIERYMNSAKEQ
QLSHLKDLSNQYEIVLSDWVKGKAQTALKTLDEVQEMFEKRHASLKKLSAKQTRPVQPVA
PRPESSPKRTLPKIPHHTAPTSNRKATENSCPSKQPSDAELAKRKNIRKAKGGIKIEVMH
EGGQGGSSLVLMSNETEESLSNRRSHIMNELIETERLYVEELQSIIEGYAAALDDPELIY
LIPPSLENKKEVLFGNLPEIYEFHQKTFLKELENSTEKPELVGTCFLKRKEELQIYEKYC
QNKPRSEALWRQCGDSMFFQECQKRLDHKLSLDAYLLKPVQRITKYQLMLKEMLKCSKNS
EGTAELEEALATVLDIIKSVNDSMHQIAITGFEGNLNDLGKLLMQGSFNVWTDHKKGHSK
VKDLARFKPMQRHLFLYHKMLLFCKKREETSDGHEKSPSYSFKHSLKMSSVGITENVKGD
IKKFEIWYNGREEVYIVQAPSMEVKNTWVSEIRKVLTSQLEACREASQLHQKITENIYHA
PMRNMRKTALRQSDSSSPETGYRRGDTGPNMRQKRANASASLGSERSALARKRFTLQGLS
NRRSLPAEPTPKETEVTRRFSLASTVSSSSAPRNKVPLSSSLKSKRHQIKSDPTPFGYED
TMRGALPAESKSKGTAGTKPAVPRSASQPGWSQRRLPSMDAEDFETIPSSAEDLSISSDG
EDEGHNKNGDNDRYQVQLTYESGTAQELSVEAGDLVQFLEESENGHWLVKNLRTQKTGLV
PPTVLQSTAEGVDLYSNSDIFSDLCTAALTDTEEGDDSTGPRPAQDGRFAC
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgctctgcaggctggaggaggaagaggagatgtctctactggagctacagcagagggtg
gactgtatcatcacccatgttgatgagatcatgcaacaggagatcaggccgttactggct
gtcgacataatcgaacaacttcacaggcagtttgcgcttctttcaggaggaagaggaaaa
gatggatctcccatcatcaccttcccagagttctcagggtttaatgaagtgtctgatgag
gattttgttaatgttgtcacatacctgaccagcataccaagcatggatgctgctagcatt
ggcttcatcatcatcctggaccgcaggaaggacaaatggaacgccgcactcgcttctctg
tcacggatagcgggctcctttccgggaaatctccagcttgttttggttctgaaaccctca
cgtctcctccagagggccatagctgatgtcagtatgcggttacataaggatgacttcaaa
ttgaaggtaccgattgttatgttaaattccctgtcagacttgcatggctacattgacaaa
ggccagctgacctgcgatctcgggggaaccctggactactgccacagtcaatggattcac
catcgcacagccgttgagaactttgcattaacggtgaagagcacagcacagatgctgcag
aagtttggaaccgacctggcagaaaccgaacttcccaatgacgtccagtgcaccaaagat
ctgctcatcacacacaccgaaaaacacgataagctccaggatgagctgaaaatggctata
aagcaaggaaatactctgctgtcctgtatcaaagagcaggccagtaaagccgagagccac
attttgaacccagatgaggtagagaaccaaacaactgccgagaggttgttagcgcagctc
gatgagacagagaatgcatttgaacaattctggtcaaggcatcaccttaaattagagcag
tgcttacaattacggcactttgagcaggacttcagagaggtgaaagtttctctggacggc
ctgatggagaccctgctgggcctgtctgacaccggggactgtgtggctcgggtggaacat
ctgctgggggatctgaaaactttggaggacaaagctcaggagtctttggagaaagctcag
cttcacgctcagcatggtgaccagctcattcaaagtgaccactacgccgtggactccatc
cggcccaagtgtgtcgaactgcggcggatctgtgacgacttcagcaatgaggccaaaaag
aaacgggacattctgaccaaatcacttgaaatccacaaacgaatcgatgaggtgaaccag
tggtgtgagactggagtgtatctgctggcctctcaggctgtggacagatgtcagacccaa
gaaggtgcagaagcagcgttacaggacatcgagcggtacatgaattcagccaaagagcag
cagctcagtcacctcaaagacctcagcaaccagtatgagatcgtcctgtcagactgggtc
aagggcaaagcacaaaccgctctaaaaacactggatgaagttcaagagatgtttgagaaa
agacacgcgagtctgaaaaagctttctgcaaagcaaacaaggccagtgcaaccagttgca
cctcgacctgaatcttcaccaaaacgcactttacctaaaatcccacatcacactgcacct
acatcaaatcgtaaagctaccgaaaactcctgccccagtaagcagcccagtgatgcagag
ctggcaaaaagaaagaatattcgcaaagccaaaggtggcatcaagattgaagtcatgcat
gaaggagggcaagggggatcgagtctggtcctcatgagcaatgaaaccgaagagtcgctt
tcaaacagacgcagccacatcatgaatgaactgatagagacggagaggctgtacgtggaa
gagctacagagcatcatagagggatatgccgctgcactggatgaccccgagctgatctat
ttgatcccaccttctctggaaaacaagaaggaagttctctttggaaatctgcctgaaatt
tacgagtttcaccagaagacttttctcaaagagctagaaaattctacggagaagccggag
ttagtaggaacatgttttttgaagcggaaggaagagttacaaatttatgagaaatattgt
cagaataagccacgatcggaggctttgtggcggcagtgtggggacagtatgttctttcag
gagtgtcaaaaaaggttggaccacaagctttcattagatgcgtatctgctaaagcctgtg
cagagaatcaccaagtaccagctgatgttaaaggagatgctgaagtgcagtaagaactca
gagggcaccgcagagctggaggaagctctggccacagtgctggatatcatcaaatcagtc
aacgactccatgcatcagatcgccatcactggttttgagggcaatctgaatgatttggga
aaactgctcatgcaggggtcatttaatgtttggacagaccacaagaaaggtcacagtaaa
gtgaaggacttggcacgcttcaaacccatgcagagacatctcttcctctaccacaaaatg
cttttgttctgcaagaaacgtgaggagacatcagatggccatgagaaatccccctcctac
agtttcaagcactcattaaagatgagctcagtgggaatcacagaaaatgtaaaaggagac
atcaagaagtttgaaatctggtacaatggcagagaggaagtttacattgttcaggcccct
tcgatggaagtgaagaacacttgggtgtcagagatccgcaaagtcttaacaagccagctg
gaagcctgccgagaagccagtcaactccatcagaagattacagagaacatctaccatgct
cctatgagaaatatgcgcaaaacagctctccggcagtctgactcttccagtcctgaaaca
ggctacaggcgtggagatacaggcccaaatatgcgtcaaaaacgagctaacgcttcggcc
agcctcggctcggagcgatctgctctcgctagaaagcgcttcaccttacagggcctgtca
aaccgcaggtctctccccgcagaacccacacctaaggaaacagaggtcacacgccgcttt
tctttagcctcgactgtcagctcctcctctgcaccgcgcaataaagttcctctctcctct
agccttaagagcaagaggcatcagatcaagagcgaccctacaccgttcggctatgaagac
accatgcgaggtgcacttcccgctgagagcaaaagtaaaggtactgccggtaccaagccc
gctgtgccgaggtctgcgtctcaaccaggatggagtcaacggcgtctgccatcaatggac
gctgaggattttgagaccattccttcaagtgctgaagatctctccatttcctcagatgga
gaggatgaaggacataacaaaaacggggataatgatcgctatcaggtgcagctgacgtac
gagtcaggtactgctcaggaactttccgtcgaggcaggagatttagtacagttcctagaa
gagtcggagaacggccactggctagtcaagaaccttagaactcagaagacaggactggtg
ccgcccactgtcctgcagtccacagcagagggagtagacctttacagtaactctgatatc
tttagtgacctctgcaccgctgccctcaccgatacagaggagggagatgacagcaccggg
ccgcgtcccgctcaggacggcagatttgcatgctaa
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