Carassius gibelio (silver crucian carp): 127968148
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Entry
127968148 CDS
T08819
Name
(RefSeq) retinoic acid receptor gamma-like isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127968148
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cgib03310
]
127968148
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127968148
Nuclear receptors [BR:
cgib03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
127968148
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
127968148
NCBI-ProteinID:
XP_052425051
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Position
B11:complement(3859723..3899407)
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AA seq
491 aa
AA seq
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MATNRERPMSHMTGFYPFAFSSMRNHSPFDLLANGSLFGRFGADLPKEMAALSVETQSTS
SEEMVPSSPSPPPPPRVYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSVQKNMVYTCHRD
KNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDIKEEVVLPESYELSGELEE
LVNKVSKAHKETFPSLCQLGKYTTNSSADHRVQLDLGLWDKFSELSTKCIIKIVEFAKRL
PGFTSLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLT
DLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPHRVDQLQEPLLEALKIYARRR
RPNKPHMFPRMLMKVTDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEVFEESSDS
KDTGASAPPPPAIQAIKRERDEESALEDEEDEDDECAEEGRDRAGDSEDEEWGLLQVDMG
GARKSATGRAQ
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaatagggagaggcctatgagtcatatgacagggttctacccttttgccttc
agttcaatgcgaaaccactccccctttgatcttctggccaatggcagcctatttggacga
tttggagcagacctacccaaagagatggcagctctgtcggtggagacccagagcacaagc
tcagaggagatggttcccagttctccttctccaccccctcctcctcgtgtctataaaccc
tgctttgtgtgccaggacaaatcttctggctaccattatggagtcagctcttgtgagggc
tgcaagggttttttccgtcgcagtgtccagaagaacatggtgtacacctgccacagagac
aaaaactgccagatcaataaagtgacacggaaccgctgtcagtactgccggctgcagaag
tgctttgaggttggcatgtctaaggaagcggttcggaatgacaggaataagaaaaagaag
gacatcaaagaggaggtggttcttccagaaagctacgagctgagtggagaactggaagaa
ctggttaataaagtcagcaaagcacacaaggaaaccttcccttcgctctgtcagctcgga
aagtacacgactaattccagtgcggatcatagggttcagctggatcttggactgtgggat
aagttcagtgagctctccacaaagtgcattataaagattgtggagtttgccaaacgtctg
ccaggttttacttcgctcaccatcgcagaccagatcaccttactgaaatctgcctgcctt
gacatactgatgttgcggatttgtactcgctacacaccagaacaggacactatgaccttt
tcggatggactgaccctcaacagaacacagatgcacaacgctggcttcggtccactcaca
gacctggtgtttgctttcgctgggcagctcctgcctctggagatggacgacacagagaca
gggctccttagtgccatctgcctcatctgtggagaccgcatggacctggaggaacctcat
cgggtggaccagctacaggagcccctgctggaggcgttaaagatctacgctcgccggaga
cgccctaacaagcctcacatgttcccacgaatgttgatgaaggtcactgacctccgaggc
atcagcactaaaggagcagagcgagccatcactctaaagatggagatcccaggtcccatg
cctcctctgatcagagagatgctggagaaccctgaggtctttgaggagagctctgattct
aaagacactggtgcttctgccccaccgcctcctgccatccaagccatcaaacgtgagagg
gatgaggaatctgctctggaggatgaagaggacgaggatgatgagtgtgcagaggaggga
cgggaccgagcaggggacagcgaggatgaggaatggggactcctgcaagtggacatgggt
ggagctagaaagagtgcgactggaagagctcagtga
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