Carassius gibelio (silver crucian carp): 127968158
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Entry
127968158 CDS
T08819
Name
(RefSeq) THO complex subunit 7 homolog
KO
K13176
THO complex subunit 7
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03013
Nucleocytoplasmic transport
cgib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127968158
09122 Translation
03013 Nucleocytoplasmic transport
127968158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127968158
03041 Spliceosome [BR:
cgib03041
]
127968158
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
127968158
Spliceosome [BR:
cgib03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
127968158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
OVT1
COG6_N
MTR4_beta-barrel
PAPS_reduct
DASH_Dad2
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
127968158
NCBI-ProteinID:
XP_052425067
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All DBs
Position
B11:complement(18972400..18975175)
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AA seq
202 aa
AA seq
DB search
MGSITDDEVIRKRLLIDGDGAGDDRRINVLMKSFTKWCHSNFSPEEGFSQYQRMLTSLAQ
CEFSMGKTLLVYDMNLKEMENYEAIYVDIEKSITSAHEKIAECKKEIQRAKRIRKNRQEY
DALARVIKQHPDRHETLKQLEALDKELQQLSHIKENVEDKLELRKKQFHVLLTTIQELQQ
TLENDEKMDSDDTQESSMENGD
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgggtagcatcactgatgatgaggttattcggaagcgtcttcttatcgatggagatgga
gctggagatgataggcgcattaatgtgctcatgaagagctttactaaatggtgtcattcc
aatttctcaccagaggaagggttctcacagtatcagaggatgttgacatctttggctcag
tgtgaattctccatggggaaaaccctgcttgtgtatgacatgaacctgaaagaaatggag
aattatgaagcaatctatgtagatatcgagaaaagtataacttcagctcatgaaaaaatt
gcagagtgcaaaaaggagatccagagagctaaaaggatacgaaaaaaccgccaagagtat
gatgccttggccagagttatcaagcaacatccagacagacatgagaccttaaagcagctt
gaggctttagacaaagagcttcagcagctttcacacatcaaagagaatgtggaggacaag
ttggaacttcgtaagaaacagttccatgtccttctcaccaccatccaggaacttcagcag
actttggagaatgatgagaagatggatagtgatgatacccaggagagctcgatggaaaat
ggagactag
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