KEGG   Carassius gibelio (silver crucian carp): 127968158
Entry
127968158         CDS       T08819                                 
Name
(RefSeq) THO complex subunit 7 homolog
  KO
K13176  THO complex subunit 7
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03013  Nucleocytoplasmic transport
cgib03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127968158
  09122 Translation
   03013 Nucleocytoplasmic transport
    127968158
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgib03019]
    127968158
   03041 Spliceosome [BR:cgib03041]
    127968158
Messenger RNA biogenesis [BR:cgib03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     127968158
Spliceosome [BR:cgib03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    127968158
SSDB
Motif
Pfam: THOC7 OVT1 COG6_N MTR4_beta-barrel PAPS_reduct DASH_Dad2 V_ATPase_I
Other DBs
NCBI-GeneID: 127968158
NCBI-ProteinID: XP_052425067
LinkDB
Position
B11:complement(18972400..18975175)
AA seq 202 aa
MGSITDDEVIRKRLLIDGDGAGDDRRINVLMKSFTKWCHSNFSPEEGFSQYQRMLTSLAQ
CEFSMGKTLLVYDMNLKEMENYEAIYVDIEKSITSAHEKIAECKKEIQRAKRIRKNRQEY
DALARVIKQHPDRHETLKQLEALDKELQQLSHIKENVEDKLELRKKQFHVLLTTIQELQQ
TLENDEKMDSDDTQESSMENGD
NT seq 609 nt   +upstreamnt  +downstreamnt
atgggtagcatcactgatgatgaggttattcggaagcgtcttcttatcgatggagatgga
gctggagatgataggcgcattaatgtgctcatgaagagctttactaaatggtgtcattcc
aatttctcaccagaggaagggttctcacagtatcagaggatgttgacatctttggctcag
tgtgaattctccatggggaaaaccctgcttgtgtatgacatgaacctgaaagaaatggag
aattatgaagcaatctatgtagatatcgagaaaagtataacttcagctcatgaaaaaatt
gcagagtgcaaaaaggagatccagagagctaaaaggatacgaaaaaaccgccaagagtat
gatgccttggccagagttatcaagcaacatccagacagacatgagaccttaaagcagctt
gaggctttagacaaagagcttcagcagctttcacacatcaaagagaatgtggaggacaag
ttggaacttcgtaagaaacagttccatgtccttctcaccaccatccaggaacttcagcag
actttggagaatgatgagaagatggatagtgatgatacccaggagagctcgatggaaaat
ggagactag

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