Carassius gibelio (silver crucian carp): 127968208
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Entry
127968208 CDS
T08819
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib02010
ABC transporters
cgib04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127968208
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127968208
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgib02000
]
127968208
Transporters [BR:
cgib02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
127968208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
127968208
NCBI-ProteinID:
XP_052425192
LinkDB
All DBs
Position
B11:7849763..7878204
Genome browser
AA seq
2339 aa
AA seq
DB search
MAIGTQLYLLLWKNFTYRRRNKVQLLIELLWPLFLFLILIAVRQSHPPYKQSQCHFPNKA
LPSAGTLAWFQGIICNVNNPCFHHPTAGETPGRVSNFENSILSRLFVDIRTVLTISGNRT
VLSSLQDLSQTIQRLGERPEAWPNLPVREYLRANESFSSFLRTNTSIPSASVDQLLRARL
NLQVVALAGGGMRLSDIVCNASLLGRYLTVDKRDSFPDLQRVLCAVPSNIMQKAEQIFLS
QLDVSKILTRDRLQANAADLRLISRVVSSVSRELASVMDDISSLSSFSELNSEMRLLTPE
NRSALPRESFRAFSRIMCGHPEAGGERIPSFNWYEDQDIKSFLGRNASEATDLENDNSTT
PFCENLIGSLESNPLSRIVWRSIKPLFVGKLLYTPDTPVTRSVMSEVNRTFQDFQILNDM
QEAWQEVGPRIKTFMESSLEIRLLQDLLRRPEVAVVVNLQLENTLWTASRISRFLSTPDP
DTPRRDGAPPTWLDLYQDLNNTFHTLSELTKCFSLNKMEGLATEGEMVERALELLEDRQF
WAGIVFLLPEPSSSSLPSHVKYKIRMDIDDVTRTNKIKDKFWDPGPAAEPFSDLRYVWGG
FIYVQDLVERAVTRLLTGKEPKMGIYVQQMPYPCFVDDVFIRVLNRSLPLFMTLAWIYSV
AMIIKGVVFEKEARLKETMRIMGLSSGMLWLSWFISSYLPFLFSAGLLIAALKWGDILPY
SDPAVVFFFLAAFATATIMLCFLISTFFSRANLAAACGGLIYFTLYLPYVLCVAWREHLT
STHRILASFLSPVAFGFGCEYFSQYEEQGVGIQWFNLRSSPLEGDSYNFTVSIVMLYADA
VIYALATWYIEAVFPGQYGVPRPWYFIFQLNYWGGVPLEVGLPVPPAPRDEPDDRIEAEP
TNLILGVSIRNLVKIYKKGAKLAVNHLNIKFYEGQITSFLGHNGAGKTTTMSILTGLFPP
TAGTIYVKGMDIRTDMDMIRRTLGVCPQHNVLFDILTVEEHVWFYGRMKGMSLEEVKKEM
DSLLEDVGLQHKRHEQTKNLSGGMQRKLSVAIAFIGGSKVVVLDEPTAGVDPYSRRGIWD
LLLKYRQGRTIILSTHYMDEADLLGDRIAIISQGKLCCCGTPLFLKAHLGTGYYLTLVKR
EMHSMPSSASTGKLPLTAATKDSDSSVSDDTGLGSEENGFDVAALMALAQQYIPETQLVE
DIGREAVINLPHAASEDGSLALFLKELNKRQGEFGVVSYGLSDTTLEEIFLRVAEETGVD
ADPEEPAASPVHQGAPSVDRDTGRKQPIRREARETEPLSGDGQGGNAPLTGCFLTCQQLR
ALFTKRLKYALRSRRGILAQIVLPAVFVLIALLFSLIVPPFGKYPPLELQPWMYGEQFTF
FSNDAPQNPAIQNLLDALLNPPGFGTRCMEPSGDTECSEEGEIKFVRPQIPFSMWQLFQK
GNWTVEKPSPDCECSTEDIRRMLPDCPEGAGGIPPPQMKSMTGDFLQNLTGRNISDYLIK
TYPQILKKSLKTKKWVNEFRYGGFSLGAKSSQAVDEPHYLEESVLAIRRRYNIVENGSLD
QLLHRLPDVLAGLTSQNNVKVWFNNKGWHAMASFVNIMNNGLLRANLPPDMERRKYGMTA
YNHPLNLTKEQLTEMALMTTSVDVLVSICVIFAMSFVPASFVLFLIEERVSKSKHLQFVS
GVKPILYWTTNYVWDMLNYTVPATMVVFIFISFQQESYVSEKNLPALVLLLLLYGWSITP
LMYPASFIFSVPSTAYVVLTSINLFIGINGSVATFVLELFIDEHLNEVNRILKKVFLIFP
HFCLGRGLIDMAKNQAMADAFQRLGTKQNLDPLSWDFVGKNLFAMAMEGIVFFIFTVLLQ
YKFFVNLSRWSGFVLPPLGTEDEDVARERDRVKSGRAVGDVLILKDLSKVYQAGRKPAVN
RLCLGIPRGECFGLLGVNGAGKTSTFRMLTGDTHITYGEAFLSNHSVLTEMQKVHQLMGY
CPQFDAISDLLTGREHLEFYARLRGVPEAHVAKVAQWGVQKLGLSQYAEREAGGYSGGNK
RKLSTAISLIGAAPVIFLDEPTTGMDPKAKRFLWNCILNVIKEGRSVVLTSHSMEECEAL
CTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILRLSSPSTEPCPVDAFIQSSFPGIQLKE
RHQNVLQYQLPSQACSLACVFELLSNNYEELGIVDYSVSQTTLDQVFVNFAKEQTDDEEL
REVMINGGGSVANQANRPQRPTDLKLKISSRSSTPHSLTTPSTDQATRSVQTPESAFTGS
KTKRSKSNSPSVSGQQQQIRMEPVGEAANGSNPLEDQTPGKKDPSTLFIVGSKTQESKV
NT seq
7020 nt
NT seq
+upstream
nt +downstream
nt
atggccattggaacacagctctacctgctgctgtggaaaaacttcacataccgcaggaga
aacaaggtgcaattgcttattgaactcctgtggccgctcttcctcttcctcatcctcatt
gctgtccggcagtctcacccaccgtataaacagagccagtgtcattttcccaacaaggcc
cttccttcagcaggcacgctggcatggtttcagggcatcatctgcaatgtcaacaatccc
tgttttcatcaccccacggcaggagagacacccgggcgagtgagcaactttgaaaactcc
atactatctcggcttttcgtggatatcagaactgtcctgacaatcagtggtaaccggaca
gtactctccagcttacaggacctgtcacagacaatccagagactcggagaaagaccagaa
gcttggccgaatctacctgtaagagagtatctcagagccaatgaaagcttctcctccttc
ctgcggacaaacaccagcatcccttcagcatctgttgatcaattactgcgggcacgattg
aaccttcaagtggttgcattagcaggtggaggaatgcgtctgtcagacatcgtctgcaat
gcttctctcttgggtcggtacctcactgttgacaaaagagattctttccctgacctgcaa
agggtgctgtgtgctgtgccttcaaatattatgcagaaggccgagcagatcttcctctca
cagcttgacgtcagcaagatcctcacgagagacagactgcaggcaaatgcggctgatctc
cgtctcatcagtcgggttgtttcctctgtgtctcgggaactagcatcagttatggatgac
atctcttctctgtccagtttctcagagctgaactcagagatgaggctactgacacctgaa
aaccgctccgcactgccacgcgagagctttcgtgccttctccagaatcatgtgtggacac
ccagaggcagggggagagagaatcccttcattcaactggtatgaagatcaggacatcaaa
tctttcctgggcagaaatgcatcagaggcgacagaccttgaaaacgacaacagcaccact
ccgttctgtgaaaacctgattggaagtctggagtcgaaccctctctcacggattgtgtgg
cgaagcatcaaaccactgttcgttggaaagctgctctacacaccagacacaccagtcacc
cgttcggtcatgtcagaggtaaacagaacttttcaggacttccagattctgaatgacatg
caggaggcgtggcaggaagtgggtcccagaatcaaaaccttcatggagagcagtttagaa
attcggctcctgcaggatcttctgagaaggcctgaggtggcagtagttgtgaatctacaa
cttgagaacactttgtggacggcctctcgcatttcccggttcctgtcaacgcctgaccca
gatacacctcgcagagatggcgctccacccacctggctggatctgtaccaggatttaaac
aacaccttccacactctctcagaactcactaagtgcttctctctgaataaaatggagggt
ctggccacggagggtgagatggtcgaacgagccctggagctgctggaagatcgtcagttt
tgggccggaatcgtcttcctccttccagagccttcatcgtcctctctgccgtctcatgtc
aaatacaagatccgcatggacatagacgatgtaacccgcacgaacaagatcaaagacaaa
ttttgggatccaggcccggctgctgaaccgttcagtgacctccgctatgtgtggggtggt
tttatttacgtacaggatttagttgagagagctgtgacacgtttgctcaccggtaaagag
ccgaaaatgggcatatatgtgcagcagatgccctacccctgctttgttgatgacgtgttt
atacgcgtcctgaatcgttctctgcctctgtttatgactctggcgtggatctattcagtg
gctatgatcataaagggcgtggtctttgagaaagaggctcgtctgaaggagacgatgcgt
atcatgggtctgagctctgggatgctgtggctcagctggttcatcagcagttacctgccc
ttcctgttcagcgctggactgcttatcgccgcccttaagtggggcgatatcttaccctac
agtgaccctgctgttgtgttcttcttcctggctgcatttgctacagcaaccatcatgctt
tgcttcctcatcagcacgttcttctcgcgagctaacctggctgcagcatgtggaggactc
atttacttcactctgtacctgccgtatgtgctgtgtgtggcctggagggaacatctgacc
agcacacacaggatcttagcgagcttcctgtctccagtagcctttggttttggctgtgag
tatttctcgcagtatgaagagcaaggtgtggggatccagtggttcaacttgagatccagc
cctttggagggagacagctacaacttcaccgtctccattgtgatgctgtatgcagatgcc
gtcatctatgcactggccacttggtacattgaagctgtttttccagggcagtatggggtc
cccagaccgtggtattttatcttccagctgaattactggggtggggtacctttagaagtg
gggttacctgttcctcctgctcctagagatgaacccgatgatcggattgaagctgagccg
acaaacctgattctgggagtttccataagaaacttagtgaagatttataaaaaaggggcc
aagcttgctgtcaatcacctgaacataaagttttatgagggacaaataacatcctttctg
ggtcataatggagctggcaagacgaccactatgtccattctaacaggactgtttcctccc
actgctggtacgatatacgtgaagggaatggacattcgcacagatatggacatgatccgc
aggactctgggagtttgtccccagcacaacgtcctttttgacattctgacggtggaggag
catgtgtggttctatggtcgaatgaagggcatgagtctggaggaagtgaagaaggagatg
gattcacttctggaggatgtgggcttacagcacaaacgacacgagcagaccaaaaacctt
tcaggtggcatgcaaaggaaactgtcagttgcgatcgctttcataggcgggtcaaaggtt
gtggtcttggatgagcccacggctggtgtggacccttactcccgccgtgggatctgggac
cttctgctcaagtaccgtcaaggccgcaccatcattctgtccacacattacatggatgag
gctgacctcctcggtgaccgcattgcaatcatttcccaggggaagctgtgctgctgtgga
acgccgctcttcctcaaggctcatcttggtactggatactaccttacgctggtcaagaga
gagatgcatagtatgcccagcagcgccagcactggcaagctccctttaactgcagctacc
aaggacagcgattcctcagtaagtgatgacacaggactgggcagtgaagagaatggattt
gatgttgccgcccttatggctcttgcacagcagtacatccctgaaactcagctggtggag
gacattggcagagaggcggtcatcaacttgccccatgcagcctcagaggacggcagtctc
gccctctttttgaaggaactgaacaagcggcagggcgagtttggtgtggtcagttatgga
ctgtcagacaccacgttagaagagatctttttgcgtgtggctgaggagacgggtgtagat
gcagaccctgaggagccagcagcgtctccagtccaccagggggcgccgtctgtggacaga
gacacgggacgaaaacagccaatcaggagagaggcccgggagacagaaccgctgagtggg
gacggtcaggggggcaatgctcctctaacaggctgcttcctcacatgtcagcagcttcga
gcgcttttcaccaaaagactgaagtatgcccttcgcagtcgcagaggcattcttgctcag
attgttcttcctgcggtgtttgtccttatcgctctgctcttcagtctcattgtcccaccc
tttgggaaatatccacccctggagctccagccatggatgtacggagagcagttcaccttc
ttcagcaatgatgccccacagaatccagccatacagaacctcctggacgccctgctgaac
ccacctgggtttgggaccagatgtatggagccgagcggagacactgagtgttcagaggaa
ggtgaaataaagtttgtccggccccagattcccttcagtatgtggcaactctttcaaaaa
ggcaactggactgtagagaagccgtcccctgactgcgagtgcagcaccgaggatatccgc
aggatgctgccggactgtccggagggggcagggggaatcccccctcctcagatgaaatca
atgacaggtgatttcctgcaaaatctgactggtcgcaacatttctgactacctcatcaaa
acatatccccagattctgaagaaaagtttgaagacgaaaaaatgggtaaatgaatttaga
tatggaggtttctctctcggagcaaaaagctctcaagctgtggatgagccacattacctg
gaggagtctgttttggctatcaggagacgctacaacattgtagagaatggctctttagat
cagctccttcacagactaccagatgtccttgcgggactcaccagccaaaataacgtgaag
gtctggtttaataataaaggatggcatgccatggcatcattcgtgaatatcatgaacaat
ggtctccttcgtgccaacctgccacctgacatggaaagacgtaaatatggaatgacagcc
tacaatcacccgctcaacctcaccaaggagcagctgacagagatggccctgatgaccacc
tcagtggacgttctggtgtccatttgtgttattttcgccatgtcatttgttcctgccagc
ttcgtcctgttccttattgaggaacgggtgagtaaatcaaaacacctccagtttgtcagc
ggagtgaagcccatcctgtactggaccaccaactacgtatgggacatgctgaactatact
gtaccagccactatggtggtcttcatcttcatcagcttccagcaggagtcatatgtatct
gagaagaatctgcctgcactggtgctcttactcttgctgtatggctggtctatcactcca
ctcatgtacccagcctccttcatcttctccgtccctagcactgcctacgtggtcctcacc
tccatcaacctctttatcggcatcaatggcagcgttgccacctttgtcctggagctcttt
attgacgagcatttgaacgaggttaacaggatcctgaagaaggtctttctgatcttccct
cacttctgtctgggccgaggtctcattgacatggccaagaaccaagccatggcagatgcg
tttcagcggctgggaaccaaacagaatctggatcctttatcctgggattttgtcgggaag
aacctgtttgcaatggcgatggaaggaattgtgtttttcatcttcactgttctcctgcag
tataaattctttgttaatttgagccgatggtctggctttgtgctgccccccctgggcacg
gaggatgaggatgtggcgagagagcgagatcgtgtgaagagtggtagagctgtgggagac
gttctcatcctcaaagaccttagcaaggtataccaggcaggcaggaagccagctgtgaac
cggctttgcttgggcattcctcggggagagtgttttgggcttcttggtgttaacggagct
gggaaaacctcaacctttcgcatgctaacaggagacacccacatcacttacggagaagca
tttcttagcaaccacagcgttcttacagaaatgcagaaggttcatcagctgatgggctac
tgtccccagtttgatgccatcagtgacctgctgacgggacgagagcacctagagttctac
gcacgcctcagaggagtgcctgaggctcatgttgcaaaggtggcacagtggggagtgcag
aagcttggtctgagtcagtatgctgagcgagaggctgggggctacagcggaggaaacaag
cgcaaactgtccaccgccatttccctcattggagctgcgcctgtcatcttcctggatgag
ccaacaactgggatggacccaaaggccaagcgcttcctctggaactgcatcctaaatgtg
atcaaagagggacgatccgtcgttctcacctcccacagtatggaagagtgtgaggctctg
tgcacccgaatggccatcatggtgaacggcaggttccagtgtctgggttcagttcagcac
ctgaagaacaggttcggagacggttacacaataatcctccgtttgtccagcccatctaca
gaaccatgtccggtggacgccttcatccagagctccttcccgggcatccagctgaaggag
agacaccagaatgttctccagtaccagctgccatcacaagcctgttcactcgcttgtgtc
tttgagcttctgtcgaataattatgaggagctggggatagttgactactcggtgtcacag
actacactggatcaagtgtttgttaactttgctaaagagcagacagatgatgaagagctc
agggaagtcatgataaatggtggaggatccgtggcgaatcaagccaacagacctcaacgg
cccacagacctcaaactcaagatttccagcagatcttccacaccgcactctttaacaacg
ccctctacagatcaagctactcgctcagtacaaacccccgagtctgcattcactggctca
aagaccaaaaggagcaaatcaaacagtccatcggtctcaggacagcagcagcagatccgg
atggaacctgttggtgaggcagctaatggatcaaaccccctcgaggaccagactcctggg
aaaaaagacccatccacgttgtttattgtcggaagcaaaacacaggaaagcaaagtgtaa
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integrated database retrieval system
