Carassius gibelio (silver crucian carp): 127968300
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Entry
127968300 CDS
T08819
Name
(RefSeq) colorectal mutant cancer protein-like isoform X1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cgib03037
]
127968300
Cilium and associated proteins [BR:
cgib03037
]
Primary cilia and associated proteins
USH complex and associated proteins
127968300
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Gene cluster
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
DUF2089
Motif
Other DBs
NCBI-GeneID:
127968300
NCBI-ProteinID:
XP_052425373
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Position
B11:complement(22858733..22872313)
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AA seq
632 aa
AA seq
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MMEQRSDSLVLADSELAQCEMEVNTLLKNISDLNRKMDSLQIPRESPVGLSGCSMVDAGT
ASVESKTKTVCRDSEGGGSEQWNELQKVLSALETSSGQGRKMLFRLQTQNAETIQAKHLS
AARESWVQATQVLEEMERELGFSYPSALPHDERRQYQRDVLSLYKHNQDLNKSLKSHQEE
LMGAERTLMYLEDEKKWLQEKVVDLKRKWLYGASCSPSVSPSLPSSRTSSPCFSSPPYPG
SPLLSRKLPSSRPDSPSSLCTVDSVLQTEIEKLQRCLERLKARNERLNAALLRRKGESEQ
LSMSLSRQEADSSALHMALVYCEECEEAYGDLLSLSEARKQQNAETISTPQSENLDKGES
SSSPPEGTAETKPNSLSEKEFEDRSGVLLQRISRLKQDRAAVCIPRRGEAGEGMISPDTG
TLAGVRGRTSSLSKNTKEEKAALLYELVTVREEMSEMRGNLRLLEKERRCLDLALMVQSA
QDSAGALILDSLRDELGDRRATQQRIAENLAKLEGGGGIPGPRNHSILRELQAALQREQS
LRKRVTVLRESLDSALTDSTTQRRINREEIDHLSRYYIKISSTYRSSRKKQQDQLWQLEK
QITVMSERHAKEEAELSNTLEAMEWRREETIL
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcagagatcggacagtctggtgttggcagactctgaactggcgcagtgtgag
atggaggtcaacactttactgaagaacatttctgacctcaacaggaagatggactcccta
caaataccacgagaaagtccggtcgggctcagtgggtgctcgatggtggacgctggcaca
gcatcagtggagtccaaaaccaagactgtctgccgggactcagaagggggcggtagtgag
cagtggaacgagctgcagaaggttctctctgctcttgagacgtctagtggtcaagggagg
aaaatgctcttcaggctgcaaactcaaaatgctgagacaatccaggcaaagcatctctct
gcagcccgggagagctgggttcaggccacacaggtgctggaggagatggagagggagttg
gggttctcgtacccctctgctctgccccatgatgagagacgtcagtatcagcgggatgtt
ctctcactctacaaacacaaccaagacctcaacaagtcactgaagagccatcaggaagag
cttatgggtgctgaaagaactctgatgtatcttgaggatgagaaaaagtggctacaggaa
aaggtggtggacctgaagaggaaatggctgtatggagcgagttgttctccttctgtcagt
ccttcattgccctccagtcgaacttcaagcccttgcttttcctctcctccatatcctggg
tccccgctgctgtcccgcaaacttcccagctccagaccggactccccttcgtctctctgc
accgttgattcagtgctgcagactgagatcgaaaaactgcagaggtgtctagagcgtctg
aaagctaggaatgagcgtctaaatgccgcactgctcagaaggaaaggagaatcggagcag
ctgagcatgagtcttagccgacaggaggcagacagctcggctctacacatggctctggtg
tactgtgaggagtgtgaggaggcttacggtgatctgctgtccctgtctgaagccagaaaa
caacagaacgcagaaacaattagcacaccccagtctgagaacttggacaagggcgagtca
tcctccagtccaccagagggcactgctgagaccaaaccaaacagcttgtcggagaaggag
tttgaggacaggtctggtgtacttctgcaaaggatctccaggctgaagcaggacagggct
gctgtgtgtataccacgccggggcgaagcaggagagggcatgatcagtcctgacactggc
acgctcgcaggggtcagaggtcgcaccagttcactttccaaaaacaccaaagaagagaaa
gcggctctgctgtatgagcttgtaacagtcagggaggagatgtcagagatgcgtgggaat
ctgcggctcctggagaaagagaggcggtgtttggacctggcgctgatggtccagagtgcc
caggattcagctggtgctctgatcctggacagtcttcgggatgagctgggggacaggaga
gccactcaacagagaattgccgaaaatttggcaaagctagaaggtggagggggaattcct
ggtcctcggaatcactctatcctaagagaactacaagcagcactgcaaagggaacagtca
ctgagaaagagagtgacagttttacgtgagtcgctggactctgcgctcacagacagcact
actcagagaaggatcaacagagaggagattgatcatctgtcccgctactacattaaaatt
tcaagcacctacagaagttctcgaaagaagcagcaggatcagctgtggcaactggagaag
caaatcacagtcatgagtgaacgtcatgcgaaagaagaggccgagctaagtaatacacta
gaagctatggagtggaggagagaggagacaatactctag
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