Carassius gibelio (silver crucian carp): 127968343
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Entry
127968343 CDS
T08819
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04517
IgSF CAM signaling
cgib04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
127968343
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127968343
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgib04812
]
127968343
Cytoskeleton proteins [BR:
cgib04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
127968343
Intermediate filaments
Intermediate filament-binding proteins
127968343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
PMC2NT
PH_11
PHA_gran_rgn
Motif
Other DBs
NCBI-GeneID:
127968343
NCBI-ProteinID:
XP_052425445
LinkDB
All DBs
Position
B11:complement(23622570..23713320)
Genome browser
AA seq
2351 aa
AA seq
DB search
MTTVAAEYDHMDIQQQYQESVNNRWEDEWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLARVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDALLL
WCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLA
EQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIETE
KMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGN
LEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQEKLE
QLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERVQAV
VAVARELETENYHDIKRITARKDNVLRLWEYLLELLKARRQRLEMNLGLQRVFQEMLYIM
DWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIGIQADRVKAVNANAQKFAVDEEAG
YKPCDPQVIRDRVAHMEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDCGKDLTGAVRLLSQHRALEDEMSGRSGHLQHTVREGQAMADSGHFAEDKIRERIA
DVQAQWAALEQLAAVRKMRLEEACSLHQFQADADDVDAWTLDALRIVSTADVGHDEFSTQ
ALVKKHKDASAEVASYRSVIDALHEQAQSLPPEQVQAANVNERLAGIEERYKEVSELSRL
RKQALQDALALYKMFSEADACEHWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLIHSGHPSEKDIKTQQDKLNTRWSQFRDLVDQKKESLNSALGVQNY
HLDCNETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEAKLGDLRGEAE
RLAGEHPDQAKAITGRLAEITAVWEEMKETLRNREASLGEASKLQQFLRELDDFQSWLSR
TQTAIASEDMPNTLAEAEKLLAQHEGIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQIFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEDKINSVVEAGRRLASDGNINADRIQERAASIDDRHKKN
REAAVELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELQSNKEWLDKIEKEGTQLVSEKPETEAVVKEKLAALKEMWTELETKTQTKAQCLFDAN
KAELFTQSCADLDKWLVGLEGQIQSDDYGKDLTSVSILLKKQQMLENQVEVRQKEVEELQ
SQAHVLRQEGRDTDEVDGRRKEVELKFKELLEPLQKRKNFLMASREIHQFNRDMEDEILW
VEERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRCDDILERSQSILKTDSPNAE
AIRARLSDLERLWSLIIQETERRHARLEEAHEAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSSVAMLKKHQILEQAVEDYAETVHQLSKTSRGLVATNHPESERIGMRQSQVDKLYA
GLKDLSEERRGKLEERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDGVNRMADELINAGHTDAATVAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEILGRILDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAVRLQSAYAGDKADDIQRREGEVLEAWRSLLEACEGRRTRLLDTGDKFRFFSMVR
DLMLWMEDVIRLIETQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTVCIELGKSLLARK
HYASEEIKEKLLQLTDKRKDMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPYLS
SREMGQNVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEEKRRKPP
TPEPVQEQDAETQQREGEQIAQNGLPSDQDSPRDGVDGEMNGVPERSSKEPSPIPSPSAD
RRAKGSQSSTLPAKGQETLSAQLEGFLHRKHEWEGHNKKASSRSWHNVYCVINTHEMGFY
KDNKSAAQGVPYHSETPVSLKDAVCEVAVDYKKKKHVFKLRVTDGNEYLFQAKDDEEMNT
WIQAIQNAGSGSSSSEKSEITPSNQSTPASSRAHTLPATVSLTTESSPGKREKDKEKDKE
KRFSLFSKKKP
NT seq
7056 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtagccgcagaatacgaccacatggacatccagcagcagtaccaggaaagt
gtgaacaaccgctgggaagacgagtgggacaatgagaacagctcggctcggttgttcgag
cgctcgcgcatcaaagctctagcagacgagcgagaggccgtgcagaagaagaccttcacc
aaatgggtgaactcacacctggcgcgcgtgtcctgtcggatcacggatctctacatggac
ctgcgcgacggacggatgctcatcaagctgctggaggttctgtccggagagagactgccc
aagccgacgaagggccgcatgcgaatccactgtctggagaacgtggacaaggccctgcag
ttcctcaaggagcagcgcgtgcatctggagaacatggggtcacatgatatcgtggacgga
aaccaccgcctcacgctcggactcatctggaccatcatcctccgcttccagatccaagac
atcagcgtagagaccgaagacaataaagagaagcgctcggccaaggacgcgctgctcctg
tggtgccagatgaagaccgcaggctatcccaacgtcaacatccacaacttcaccaccagc
tggcgtgacggcatggctttcaacgccctcattcacaaacacaggccagacctgattgat
ttcgacaaactgaagaagtccaacgctcactacaacctgcagaacgccttcaacctggca
gagcaacatctggggctcaccaaactcctggaccccgaagatatcagcgttgaccatccc
gatgagaaatctgtcatcacttatgtcgtcacatactaccattatttctccaagatgaag
gcactgaaggtggagggcaaacgcatcggaaaggtgctggacaacgccatcgagacggag
aagatgatcgagaaatatgaatctctggcgtctgatctgctggagtggattgagcagacc
atcatcatcctcaacaaccgcaagtttgcaaactctctggtcggagtccagcagcagctc
caggccttcaacacttacaggaccgtagagaaaccacccaaattcactgagaaaggcaac
ctggaagtgcttctgttcaccatccagagcaagatgagggccaacaaccagaaagtgtac
atgcctcgagagggcaaactcatctcagacatcaacaaggcgtgggagcgtctggagaag
gccgagcacgagcgtgagctggcgctgaggaccgagctgattcgacaggagaagctggag
cagctcgccagacgcttcgaccgcaaggctgccatgagagagacctggctgagcgagaac
cagcgcctcgtctcacaggacaatttcggattcgacctccaggcggtcgaggcagctacc
aaaaagcacgaagccatcgagacggacatcgcagcgtacgaggagcgcgtgcaggcggtg
gtggccgtggccagagagctggagacggagaactatcacgacatcaagcgcatcacggcg
cgtaaagacaacgttctgcgtctgtgggagtatctgctggagctgctcaaggcccgcaga
cagcggctggagatgaacctcggcctgcagcgcgtcttccaggagatgctctacatcatg
gactggatggacgagatgaagatgctgctgctgtctcaggattacgggaagcatctgttg
ggagtagaggatctgctgcagaagcacgctctggtggaggcagacatcggcatacaggcc
gaccgcgtcaaggccgtcaacgccaacgcacagaagttcgccgtggatgaggaggcaggc
tacaaaccctgtgaccctcaggtcatccgtgaccgtgtggcacacatggagttctgctat
caggagctgacccagctggcagcggagcgccgcgctcgtctggaagagtcccgccgactc
tggaagttcttctgggagatggcggaggaggagggctggattcgggagaaagagcagatc
ctgtcttcggacgactgcggtaaggatctgacaggcgccgtgcgtcttttgagtcaacac
cgtgctcttgaagatgaaatgagcggccgctccggtcacctccagcacacggtgcgtgaa
ggtcaagccatggcggattctgggcactttgccgaagataagattcgcgaacgcatcgct
gacgtccaggcccaatgggccgctctggaacagctggctgcggtgaggaaaatgcgcctt
gaagaggcttgcagccttcaccagttccaggccgatgcggatgacgtcgacgcctggact
ttagacgcgcttcgaatcgtctccaccgctgacgtcggccatgatgaattctccactcaa
gctttggtcaagaaacacaaagacgcctcggccgaggtcgctagttatcgctcggtgatc
gacgctcttcacgaacaggcccagtcccttcctcccgaacaggtgcaggctgccaacgtc
aacgagcggctagcaggcatcgaggagcgctataaggaagtctccgagctcagcagactg
aggaaacaggccctgcaggacgccctggcgctctataagatgttcagcgaggcggacgcg
tgtgagcactggattgacgagaaggagcagtggctcaacagcatggagatcccagagaaa
ctggaggacctggaggtcattcaacacaggtttgagagtctggagcctgaaatgaataac
caggcgtcacgcgtggccgttgtcaatcagatcgccaggcagctcattcacagcggacac
ccgagcgagaaagacatcaaaacccaacaagacaaactcaacaccagatggagtcaattc
cgcgacttggtggaccagaagaaagagtccctcaactcggctttgggtgtgcagaactac
cacctggactgtaacgagaccaaatcctggatccgcgagaagaccaaagtcatcgagtcc
acccaggagctgggcaacgacctgacgggggtcatggccctccaacgcaagctcaccggc
atggagcgcgatctggccgccatcgaagccaaactgggcgacctccgcggcgaggcggag
cgattggccggcgaacaccccgaccaggccaaagccatcacgggacggctggccgagatc
accgccgtctgggaggagatgaaggaaaccctacgaaaccgtgaagcgtctctcggggaa
gccagcaagctgcagcagttcctccgagagctggacgatttccagtcctggctttcccga
acgcagacggccatcgcgtccgaggacatgcccaacacactggccgaggccgagaagctt
ctggcccaacacgaaggcatcaagaacgagattaacaactacgaagaagactatcagaag
atgagggacatgggcgagatggtgacgcaggggcaaacagatgctcagtacatgttcctg
agacagaggctccaggctctagacaccggatggaacgagcttcacaagatgtgggagaac
cggcagaaccttctgtcgcagtctcacgcttatcagatcttcctcagagacaccaaacaa
gccgaggccttcctcaacaaccaggagtatgttctggctcacaccgagatgcccaccacc
cttgaaggagcagaggctgccattaagaaacaggaggacttcatgaccaccatggacgcc
aacgaggacaagatcaacagtgtggtggaggccgggaggagactggccagtgacggaaac
atcaatgctgaccgcatccaggagagagcagcctccatcgatgaccggcataagaagaac
cgagaggcggccgtggagctgctcatgagactgaaggacaacagagacctgcagaagttc
ttacaggactgtcaggagctgtctctgtggatcaatgagaagatgctgaccgcacaggac
atgtcctacgatgaagctcgcaacctacacagcaaatggctcaaacaccaggccttcatg
gccgaactgcagtccaacaaagagtggctggacaaaatcgagaaggaagggacacagctg
gtctcggagaagccggagacagaagccgtggtgaaggagaagctggcggcgctgaaggag
atgtggaccgagctggagaccaagactcagactaaagcccagtgtctgtttgacgccaac
aaagccgagctcttcacgcagagctgcgccgatctggacaaatggctggtgggtctggag
ggtcagatccaatcggacgactacggcaaagatctgaccagcgtcagcatcctgctgaag
aaacaacagatgctggagaaccaggtggaggtgcgtcagaaggaggtggaggagctccag
tctcaagctcatgtgttgagacaggaaggaagggacacggatgaggtcgatggacgccgg
aaggaggtggagctgaagtttaaggagctgctggagccattgcagaaacggaagaacttt
ctcatggcctctcgagagatccatcagtttaaccgtgacatggaggatgagattctctgg
gtggaggagcggatgcctctcgctacgtccacagaccatggccataatttacagactgtt
cagctgctcatcaagaagaaccagacattacagaaggagatccagggccatcagccgcgc
tgtgacgacatactcgagcgcagccagagcatcctgaagaccgacagtcccaatgcagag
gccatccgagcccgtctgtccgatctggagcggctgtggagcctgatcatccaggagacg
gagagacggcacgccagactcgaggaggcccatgaagcccagcagtactactttgacgca
gctgaagctgaagcctggatgagcgagcaagagctttacatgatgtctgaagagaaggcc
aaggatgagcagagttcggtggccatgctgaagaagcaccagatcctggagcaggcggtg
gaggactatgctgaaaccgtgcaccagctttccaagaccagccgaggcctggtggccacc
aaccaccctgagagtgagaggatcggcatgcgtcagtcacaggtggataagctctacgcc
ggactgaaggacctatcagaggagaggagaggaaaactggaggagcgcttccgcctcttc
cagctcaaccgggaggtggatgatctggagcagtggatcgccgagagagaagtggtggct
ggatctcacgaactcggacaagactacgaacatgtcactatgttgcaggagcgtttccgt
gaattcgctcgtgacacggggaacatcggtcaggagcgcgtggacggcgtgaaccgtatg
gctgacgagctaataaatgcagggcacactgacgcagcgactgtggccgagtggaaggac
ggcctgaacgaggcctgggccgatctgctggagctcatcgacacacgcacacagattctt
gccgcatcctacgagctgcacaagttctaccacgacgccaaggagatcctgggacgcatc
ctggacaaacacaagaagcttccagaagagctgggacgagaccagaacacggtggaaacc
ttgcagaggatgcacaccacgtttgaacacgacatccaagctctcgggacacaggttcgg
cagctgcaggaggacgccgtgcgtctgcagtcagcgtatgccggagacaaagcggatgac
atccagcggcgtgaaggcgaggtgctggaggcctggaggagtctgctggaggcctgcgag
ggccggaggacacggctgctggacaccggagacaagttccgcttcttcagtatggtgcgt
gacctcatgctgtggatggaggacgtcatccgcctcatcgagacgcaggagaagcccagg
gacgtgtcatctgtggagcttctcatgaacaaccaccagggaatcaaggctgaaatcgat
gcccgtaacgacagcttcacggtctgcatcgagctgggcaaatctctcctggcacggaaa
cactacgcatcagaggagatcaaagagaagttgttgcagttgacggacaagaggaaagat
atgattgacaagtgggaggacagatgggagtggcttagactgattctggaagtgcaccag
ttttcgcgggacgccggcgtggcagaggcgtggctgctgggacaggaaccctatctgtcc
agcagagagatgggacagaatgtggacgaggtggagaagctgatcaaacgacacgaagcc
ttcgagaagtcagccgccacctgggaggaacgcttctcagcgctggagcgactgaccacg
ttggagttattggaagtgagaagacagcaagaggaggaggagaagaggaggaaaccgccc
acaccagagccggtccaggagcaggacgcagaaacacagcagagagaaggagagcagatt
gcccagaacggactgccatcagaccaggactctccacgggacggggtggacggagagatg
aacggagtgcctgagaggagctcgaaggagccgagtcccatcccgtctccgagcgcagac
agacgggctaaaggcagtcagtcgtccacacttccagcgaagggtcaggagactctgtct
gcacagctggaggggttcctgcaccgaaaacacgagtgggagggacacaacaagaaagcc
tccagcagatcctggcataacgtgtactgcgtcatcaacacccacgagatgggcttctac
aaagacaacaagagcgcggcgcagggcgtcccgtaccacagcgagacccccgtcagcctg
aaggacgccgtctgcgaggtggccgtcgactacaagaagaagaagcacgtcttcaagctc
agagttactgatggaaacgagtatctcttccaagccaaagatgacgaggagatgaacacg
tggatccaagccattcagaacgccggaagcggctcctcgtcctccgagaaatcagagatc
acgcctagcaaccagagcacccccgcctccagccgtgctcacacgctcccggcaaccgtc
tccctgacgaccgaatccagccctggaaagcgggagaaagacaaggagaaggacaaggag
aagcgcttcagtctcttcagcaagaagaagccgtag
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integrated database retrieval system
