Carassius gibelio (silver crucian carp): 127968343
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Entry
127968343 CDS
T08819
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127968343
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgib04812
]
127968343
Cytoskeleton proteins [BR:
cgib04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
127968343
Intermediate filaments
Intermediate filament-binding proteins
127968343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
SOS1_NGEF_PH
PHA_gran_rgn
PMC2NT
Motif
Other DBs
NCBI-GeneID:
127968343
NCBI-ProteinID:
XP_052425445
LinkDB
All DBs
Position
B11:complement(23622570..23713320)
Genome browser
AA seq
2351 aa
AA seq
DB search
MTTVAAEYDHMDIQQQYQESVNNRWEDEWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLARVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDALLL
WCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLA
EQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIETE
KMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGN
LEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQEKLE
QLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERVQAV
VAVARELETENYHDIKRITARKDNVLRLWEYLLELLKARRQRLEMNLGLQRVFQEMLYIM
DWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIGIQADRVKAVNANAQKFAVDEEAG
YKPCDPQVIRDRVAHMEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDCGKDLTGAVRLLSQHRALEDEMSGRSGHLQHTVREGQAMADSGHFAEDKIRERIA
DVQAQWAALEQLAAVRKMRLEEACSLHQFQADADDVDAWTLDALRIVSTADVGHDEFSTQ
ALVKKHKDASAEVASYRSVIDALHEQAQSLPPEQVQAANVNERLAGIEERYKEVSELSRL
RKQALQDALALYKMFSEADACEHWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLIHSGHPSEKDIKTQQDKLNTRWSQFRDLVDQKKESLNSALGVQNY
HLDCNETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEAKLGDLRGEAE
RLAGEHPDQAKAITGRLAEITAVWEEMKETLRNREASLGEASKLQQFLRELDDFQSWLSR
TQTAIASEDMPNTLAEAEKLLAQHEGIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQIFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEDKINSVVEAGRRLASDGNINADRIQERAASIDDRHKKN
REAAVELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELQSNKEWLDKIEKEGTQLVSEKPETEAVVKEKLAALKEMWTELETKTQTKAQCLFDAN
KAELFTQSCADLDKWLVGLEGQIQSDDYGKDLTSVSILLKKQQMLENQVEVRQKEVEELQ
SQAHVLRQEGRDTDEVDGRRKEVELKFKELLEPLQKRKNFLMASREIHQFNRDMEDEILW
VEERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRCDDILERSQSILKTDSPNAE
AIRARLSDLERLWSLIIQETERRHARLEEAHEAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSSVAMLKKHQILEQAVEDYAETVHQLSKTSRGLVATNHPESERIGMRQSQVDKLYA
GLKDLSEERRGKLEERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDGVNRMADELINAGHTDAATVAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEILGRILDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAVRLQSAYAGDKADDIQRREGEVLEAWRSLLEACEGRRTRLLDTGDKFRFFSMVR
DLMLWMEDVIRLIETQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTVCIELGKSLLARK
HYASEEIKEKLLQLTDKRKDMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPYLS
SREMGQNVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEEKRRKPP
TPEPVQEQDAETQQREGEQIAQNGLPSDQDSPRDGVDGEMNGVPERSSKEPSPIPSPSAD
RRAKGSQSSTLPAKGQETLSAQLEGFLHRKHEWEGHNKKASSRSWHNVYCVINTHEMGFY
KDNKSAAQGVPYHSETPVSLKDAVCEVAVDYKKKKHVFKLRVTDGNEYLFQAKDDEEMNT
WIQAIQNAGSGSSSSEKSEITPSNQSTPASSRAHTLPATVSLTTESSPGKREKDKEKDKE
KRFSLFSKKKP
NT seq
7056 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtagccgcagaatacgaccacatggacatccagcagcagtaccaggaaagt
gtgaacaaccgctgggaagacgagtgggacaatgagaacagctcggctcggttgttcgag
cgctcgcgcatcaaagctctagcagacgagcgagaggccgtgcagaagaagaccttcacc
aaatgggtgaactcacacctggcgcgcgtgtcctgtcggatcacggatctctacatggac
ctgcgcgacggacggatgctcatcaagctgctggaggttctgtccggagagagactgccc
aagccgacgaagggccgcatgcgaatccactgtctggagaacgtggacaaggccctgcag
ttcctcaaggagcagcgcgtgcatctggagaacatggggtcacatgatatcgtggacgga
aaccaccgcctcacgctcggactcatctggaccatcatcctccgcttccagatccaagac
atcagcgtagagaccgaagacaataaagagaagcgctcggccaaggacgcgctgctcctg
tggtgccagatgaagaccgcaggctatcccaacgtcaacatccacaacttcaccaccagc
tggcgtgacggcatggctttcaacgccctcattcacaaacacaggccagacctgattgat
ttcgacaaactgaagaagtccaacgctcactacaacctgcagaacgccttcaacctggca
gagcaacatctggggctcaccaaactcctggaccccgaagatatcagcgttgaccatccc
gatgagaaatctgtcatcacttatgtcgtcacatactaccattatttctccaagatgaag
gcactgaaggtggagggcaaacgcatcggaaaggtgctggacaacgccatcgagacggag
aagatgatcgagaaatatgaatctctggcgtctgatctgctggagtggattgagcagacc
atcatcatcctcaacaaccgcaagtttgcaaactctctggtcggagtccagcagcagctc
caggccttcaacacttacaggaccgtagagaaaccacccaaattcactgagaaaggcaac
ctggaagtgcttctgttcaccatccagagcaagatgagggccaacaaccagaaagtgtac
atgcctcgagagggcaaactcatctcagacatcaacaaggcgtgggagcgtctggagaag
gccgagcacgagcgtgagctggcgctgaggaccgagctgattcgacaggagaagctggag
cagctcgccagacgcttcgaccgcaaggctgccatgagagagacctggctgagcgagaac
cagcgcctcgtctcacaggacaatttcggattcgacctccaggcggtcgaggcagctacc
aaaaagcacgaagccatcgagacggacatcgcagcgtacgaggagcgcgtgcaggcggtg
gtggccgtggccagagagctggagacggagaactatcacgacatcaagcgcatcacggcg
cgtaaagacaacgttctgcgtctgtgggagtatctgctggagctgctcaaggcccgcaga
cagcggctggagatgaacctcggcctgcagcgcgtcttccaggagatgctctacatcatg
gactggatggacgagatgaagatgctgctgctgtctcaggattacgggaagcatctgttg
ggagtagaggatctgctgcagaagcacgctctggtggaggcagacatcggcatacaggcc
gaccgcgtcaaggccgtcaacgccaacgcacagaagttcgccgtggatgaggaggcaggc
tacaaaccctgtgaccctcaggtcatccgtgaccgtgtggcacacatggagttctgctat
caggagctgacccagctggcagcggagcgccgcgctcgtctggaagagtcccgccgactc
tggaagttcttctgggagatggcggaggaggagggctggattcgggagaaagagcagatc
ctgtcttcggacgactgcggtaaggatctgacaggcgccgtgcgtcttttgagtcaacac
cgtgctcttgaagatgaaatgagcggccgctccggtcacctccagcacacggtgcgtgaa
ggtcaagccatggcggattctgggcactttgccgaagataagattcgcgaacgcatcgct
gacgtccaggcccaatgggccgctctggaacagctggctgcggtgaggaaaatgcgcctt
gaagaggcttgcagccttcaccagttccaggccgatgcggatgacgtcgacgcctggact
ttagacgcgcttcgaatcgtctccaccgctgacgtcggccatgatgaattctccactcaa
gctttggtcaagaaacacaaagacgcctcggccgaggtcgctagttatcgctcggtgatc
gacgctcttcacgaacaggcccagtcccttcctcccgaacaggtgcaggctgccaacgtc
aacgagcggctagcaggcatcgaggagcgctataaggaagtctccgagctcagcagactg
aggaaacaggccctgcaggacgccctggcgctctataagatgttcagcgaggcggacgcg
tgtgagcactggattgacgagaaggagcagtggctcaacagcatggagatcccagagaaa
ctggaggacctggaggtcattcaacacaggtttgagagtctggagcctgaaatgaataac
caggcgtcacgcgtggccgttgtcaatcagatcgccaggcagctcattcacagcggacac
ccgagcgagaaagacatcaaaacccaacaagacaaactcaacaccagatggagtcaattc
cgcgacttggtggaccagaagaaagagtccctcaactcggctttgggtgtgcagaactac
cacctggactgtaacgagaccaaatcctggatccgcgagaagaccaaagtcatcgagtcc
acccaggagctgggcaacgacctgacgggggtcatggccctccaacgcaagctcaccggc
atggagcgcgatctggccgccatcgaagccaaactgggcgacctccgcggcgaggcggag
cgattggccggcgaacaccccgaccaggccaaagccatcacgggacggctggccgagatc
accgccgtctgggaggagatgaaggaaaccctacgaaaccgtgaagcgtctctcggggaa
gccagcaagctgcagcagttcctccgagagctggacgatttccagtcctggctttcccga
acgcagacggccatcgcgtccgaggacatgcccaacacactggccgaggccgagaagctt
ctggcccaacacgaaggcatcaagaacgagattaacaactacgaagaagactatcagaag
atgagggacatgggcgagatggtgacgcaggggcaaacagatgctcagtacatgttcctg
agacagaggctccaggctctagacaccggatggaacgagcttcacaagatgtgggagaac
cggcagaaccttctgtcgcagtctcacgcttatcagatcttcctcagagacaccaaacaa
gccgaggccttcctcaacaaccaggagtatgttctggctcacaccgagatgcccaccacc
cttgaaggagcagaggctgccattaagaaacaggaggacttcatgaccaccatggacgcc
aacgaggacaagatcaacagtgtggtggaggccgggaggagactggccagtgacggaaac
atcaatgctgaccgcatccaggagagagcagcctccatcgatgaccggcataagaagaac
cgagaggcggccgtggagctgctcatgagactgaaggacaacagagacctgcagaagttc
ttacaggactgtcaggagctgtctctgtggatcaatgagaagatgctgaccgcacaggac
atgtcctacgatgaagctcgcaacctacacagcaaatggctcaaacaccaggccttcatg
gccgaactgcagtccaacaaagagtggctggacaaaatcgagaaggaagggacacagctg
gtctcggagaagccggagacagaagccgtggtgaaggagaagctggcggcgctgaaggag
atgtggaccgagctggagaccaagactcagactaaagcccagtgtctgtttgacgccaac
aaagccgagctcttcacgcagagctgcgccgatctggacaaatggctggtgggtctggag
ggtcagatccaatcggacgactacggcaaagatctgaccagcgtcagcatcctgctgaag
aaacaacagatgctggagaaccaggtggaggtgcgtcagaaggaggtggaggagctccag
tctcaagctcatgtgttgagacaggaaggaagggacacggatgaggtcgatggacgccgg
aaggaggtggagctgaagtttaaggagctgctggagccattgcagaaacggaagaacttt
ctcatggcctctcgagagatccatcagtttaaccgtgacatggaggatgagattctctgg
gtggaggagcggatgcctctcgctacgtccacagaccatggccataatttacagactgtt
cagctgctcatcaagaagaaccagacattacagaaggagatccagggccatcagccgcgc
tgtgacgacatactcgagcgcagccagagcatcctgaagaccgacagtcccaatgcagag
gccatccgagcccgtctgtccgatctggagcggctgtggagcctgatcatccaggagacg
gagagacggcacgccagactcgaggaggcccatgaagcccagcagtactactttgacgca
gctgaagctgaagcctggatgagcgagcaagagctttacatgatgtctgaagagaaggcc
aaggatgagcagagttcggtggccatgctgaagaagcaccagatcctggagcaggcggtg
gaggactatgctgaaaccgtgcaccagctttccaagaccagccgaggcctggtggccacc
aaccaccctgagagtgagaggatcggcatgcgtcagtcacaggtggataagctctacgcc
ggactgaaggacctatcagaggagaggagaggaaaactggaggagcgcttccgcctcttc
cagctcaaccgggaggtggatgatctggagcagtggatcgccgagagagaagtggtggct
ggatctcacgaactcggacaagactacgaacatgtcactatgttgcaggagcgtttccgt
gaattcgctcgtgacacggggaacatcggtcaggagcgcgtggacggcgtgaaccgtatg
gctgacgagctaataaatgcagggcacactgacgcagcgactgtggccgagtggaaggac
ggcctgaacgaggcctgggccgatctgctggagctcatcgacacacgcacacagattctt
gccgcatcctacgagctgcacaagttctaccacgacgccaaggagatcctgggacgcatc
ctggacaaacacaagaagcttccagaagagctgggacgagaccagaacacggtggaaacc
ttgcagaggatgcacaccacgtttgaacacgacatccaagctctcgggacacaggttcgg
cagctgcaggaggacgccgtgcgtctgcagtcagcgtatgccggagacaaagcggatgac
atccagcggcgtgaaggcgaggtgctggaggcctggaggagtctgctggaggcctgcgag
ggccggaggacacggctgctggacaccggagacaagttccgcttcttcagtatggtgcgt
gacctcatgctgtggatggaggacgtcatccgcctcatcgagacgcaggagaagcccagg
gacgtgtcatctgtggagcttctcatgaacaaccaccagggaatcaaggctgaaatcgat
gcccgtaacgacagcttcacggtctgcatcgagctgggcaaatctctcctggcacggaaa
cactacgcatcagaggagatcaaagagaagttgttgcagttgacggacaagaggaaagat
atgattgacaagtgggaggacagatgggagtggcttagactgattctggaagtgcaccag
ttttcgcgggacgccggcgtggcagaggcgtggctgctgggacaggaaccctatctgtcc
agcagagagatgggacagaatgtggacgaggtggagaagctgatcaaacgacacgaagcc
ttcgagaagtcagccgccacctgggaggaacgcttctcagcgctggagcgactgaccacg
ttggagttattggaagtgagaagacagcaagaggaggaggagaagaggaggaaaccgccc
acaccagagccggtccaggagcaggacgcagaaacacagcagagagaaggagagcagatt
gcccagaacggactgccatcagaccaggactctccacgggacggggtggacggagagatg
aacggagtgcctgagaggagctcgaaggagccgagtcccatcccgtctccgagcgcagac
agacgggctaaaggcagtcagtcgtccacacttccagcgaagggtcaggagactctgtct
gcacagctggaggggttcctgcaccgaaaacacgagtgggagggacacaacaagaaagcc
tccagcagatcctggcataacgtgtactgcgtcatcaacacccacgagatgggcttctac
aaagacaacaagagcgcggcgcagggcgtcccgtaccacagcgagacccccgtcagcctg
aaggacgccgtctgcgaggtggccgtcgactacaagaagaagaagcacgtcttcaagctc
agagttactgatggaaacgagtatctcttccaagccaaagatgacgaggagatgaacacg
tggatccaagccattcagaacgccggaagcggctcctcgtcctccgagaaatcagagatc
acgcctagcaaccagagcacccccgcctccagccgtgctcacacgctcccggcaaccgtc
tccctgacgaccgaatccagccctggaaagcgggagaaagacaaggagaaggacaaggag
aagcgcttcagtctcttcagcaagaagaagccgtag
DBGET
integrated database retrieval system
