Entry |
|
Name |
(RefSeq) protocadherin-20-like
|
KO |
|
Organism |
cgib Carassius gibelio (silver crucian carp)
|
Pathway |
cgib03273 | Virion - Lassa virus and SFTS virus |
|
Brite |
KEGG Orthology (KO) [BR:cgib00001]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
127968346
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:cgib01009]
127968346
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:cgib04515]
127968346
Protein phosphatases and associated proteins [BR:cgib01009]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127968346
Cell adhesion molecules [BR:cgib04515]
Cadherins
Protocadherins
127968346
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
B11:complement(23540108..23544104)
|
AA seq |
868 aa
MWNTKRGSCLHSKGELWGLFILLLYTIPLSSSSNFSHLIYKIKEGLPKGTLIGAISADLK
LDLSVSPPRSFNLELKTARQQYVNLNNTSGELFTSAVEIDREALCAESHEGQGCAIFLDV
LILPQQYFQLVKVKIIIEDVNDNHPHFPVGDIRVSVPENAPVNARFAVEQSAVDPDIGIH
SVQTYWLANDYGVFTLDVEENEGGELTPFLIITESLDRETQAEYVTDIIAEDGGTPPLLG
TATLRIIITDVNDNCPKFTESLVNVTIYGNATKGMQLARLEAYDPDEGANALITYTFSER
VTQESRNLFNLDTNTGVLKLAGKIDNNTGKLYKLIVLANGPTCIPEVATVNVHVIKQLSG
PPVVIPRYIASEKDGVVSLSESEPAFTPIAFFTIKNTEPQQKIECLLEGAGPFRLVPYER
IKNEYLLETTELLDYEQQQDYEIVVVVRNSHGLVVNTIVKVHVLDVNDNAPVFKQSFIEI
TVEENNPPNTFLAQLQATDADSESRGEVYYLLGADAPTIFDLDRSTGVLTVSTSLDREEK
ETYRFMVRAVDRGTPRKESIATVIITVQDRNDNSPRFINKDFTFFVPENFPGFGEIGVLT
VTDADAGENGWVALSILNGSDIFVIDTGRGALRAKTSLDREQQGTYYVWIEAIDGGEPAL
SCITTVTVLLLDVNDNPPTVLFPQSNQSYMLVLPNTLPGTSITEVYAVDRDTGMNAVIAY
SIIKRTDGEPGSFDIDPYTGNITLRKTLSNRGLYSLWVKVRDHGQPELYSTVLVNLFVNE
TVSNETLIQSLLPRSVDIDHGELPPDKKGRKGEQVPNMCGEYRVLLLALTATCLGLFLTV
VSLVTYICCKRRKPKKKRSDIEIPLNSL |
NT seq |
2607 nt +upstreamnt +downstreamnt
atgtggaacactaaaagaggatcctgcctgcacagcaaaggagagttatggggtttgttc
atcctcctcttgtacaccattcccctctcctcctcgtcaaatttcagtcacctcatctat
aagataaaagaaggattacctaaagggacacttataggggctatcagtgcggacttaaaa
ttggatctttctgtcagtcctcctcgttcattcaatctggagctaaagacggccagacag
cagtacgtgaatctgaataacacgtcgggggagctgttcacatctgcggtggagattgac
agagaggctctgtgcgcggagtcccacgagggccagggctgcgcaatctttctggacgtg
ctaatccttcctcaacagtactttcagctggttaaggttaaaattattattgaggatgtg
aatgacaaccacccgcatttccctgttggagatatcagggtgtctgtgccggagaacgca
cctgttaatgcaaggtttgcggtggagcaatccgcagtcgatcccgacatcgggattcac
agcgttcaaacatactggcttgctaatgactatggagttttcacattagacgtagaggag
aacgaaggcggtgaactgacaccctttctcatcattaccgagtctcttgatagagagaca
caagctgagtatgtgactgacattatagccgaggacggaggcactccgccgcttctaggc
actgcaactctgaggattatcatcacggacgtcaacgacaactgtcccaagtttacagag
tcgctagtgaacgttactatttacggaaatgctactaagggcatgcaactggctcgtcta
gaagcctacgatccagacgagggagccaacgccttgatcacttacactttcagcgaacgg
gtcactcaggaaagcagaaacctgtttaatttggatacaaacactggggttcttaaacta
gcaggaaagattgacaacaacaccggaaaactctacaaactaatcgtgctggccaatggg
ccgacttgtattccagaagttgcaacagttaacgttcacgtcatcaaacagctctccggg
cctccggtggttatcccacgttatattgcgtccgagaaggacggtgttgtgagtttaagt
gaatcagagccagcgtttacacccattgctttttttaccatcaaaaacaccgagccacaa
cagaagatagagtgtcttcttgaaggtgcaggtccgtttagacttgtaccgtatgagcgg
attaaaaacgagtacctgcttgagaccaccgaactattggattatgagcagcaacaggat
tatgaaatagttgttgtggttcgtaactctcatggattagtagttaacaccatagtgaaa
gtccacgtgttggatgttaacgacaacgctccggttttcaagcaatctttcattgaaatc
acagtggaggagaacaacccaccaaatacattcctcgctcagcttcaggccaccgatgca
gacagtgaaagtagaggcgaggtttattacctactcggtgccgacgctcctaccattttt
gacttggatcggtcaaccggagtactgacggtgtccacttcccttgaccgagaggaaaag
gagacgtatcgtttcatggtgcgagccgtagaccgtggcacgccgagaaaggagtcgatc
gccactgtgattatcactgtccaggatcggaatgacaacagtccaaggttcatcaacaag
gacttcaccttctttgtgccggagaactttccaggttttggggaaatcggcgttcttact
gtcacagatgcggatgctggggagaacggctgggtggcgttgtccatccttaatgggagc
gacatcttcgtgattgacaccggacgaggagcgctgcgggccaagacctctctggaccgg
gagcaacagggaacgtattacgtttggatagaggcaatcgatggaggcgaacctgctctt
tcttgcatcacaacggtgactgttctcctactggatgtcaacgataaccctccgactgtt
cttttccctcagtccaaccagtcgtacatgttggtgcttcccaacacgcttccgggaacg
tctataacggaggtttacgcggtggaccgggacaccggaatgaacgctgttattgcatac
agcatcatcaagagaacggatggagagccaggctcatttgacattgacccctatacggga
aacatcaccttgaggaaaaccttgagcaatcggggcctctacagtttgtgggtcaaagtc
agggaccacggacaaccagaactctactctaccgttctggtcaacctgtttgtgaatgaa
acagtcagcaatgagaccctcattcagagtttgttgcccagaagtgtagatattgaccat
ggtgagcttcctcctgataagaaagggaggaagggagaacaagtgccaaacatgtgtggc
gagtaccgagtgttactgcttgcactgacagctacctgcctgggattgtttctgaccgtt
gtgtcgttggtgacttacatctgctgcaaaagaagaaaaccgaaaaagaagagatcagac
attgagattcccttaaattctctttaa |