Carassius gibelio (silver crucian carp): 127968375
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Entry
127968375 CDS
T08819
Name
(RefSeq) serine and arginine rich splicing factor 6b
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03040
Spliceosome
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127968375
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127968375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127968375
Spliceosome [BR:
cgib03041
]
Common components
Common spliceosomal components
SR proteins
127968375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
127968375
NCBI-ProteinID:
XP_052425505
LinkDB
All DBs
Position
B11:complement(4336084..4341824)
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AA seq
378 aa
AA seq
DB search
MPRVYIGRLSYHVREKDIQRFFSGYGKLLEIDLKNGYGFVEFEDTRDADDAVYELNGKDL
CGERVIVEHARGPRRDRDGYGGGYGGGSSRSSSGYSSRSRSGREKYGPPVRTEYRLIVEN
LSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTDINGRKI
RLVEDKPRRRRSYSGSRSRSRSRRRSRSRSRRSSQSRSRSRSRSRSCSKNRSRSRSGRKS
RSRSRRKSHSKSPTKPRSRKSKSHSRSRTQKSRSRSTSHKSRSRSDARKSRSKSRSKAKS
ERDSRSRSKEKSISRKSRSRSASPRENGNGDRAKSTSRSPSPKEDRRQSESPGKHSVSRS
PSRSKSRSRSRSRSASQD
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgagtgtacatcggcaggctgagttatcatgtgcgagaaaaggacatacagcgt
tttttcagcggctacgggaagcttttagaaatcgatctgaagaacgggtatgggtttgtg
gagtttgaggacacgcgtgatgcagacgatgcggtgtacgagctgaacggtaaagatctg
tgcggggagcgtgtgatcgtggagcacgccagaggaccgcggcgggaccgggatggatat
ggtgggggttatgggggcggcagcagccgcagcagtagtggttatagcagcaggagccga
agtggaagagagaaatatggaccaccggttcgcacggagtaccgtctgatcgtggagaac
ctgtccagtcgctgcagctggcaggatctcaaggacttcatgcgtcaagctggagaggtg
acctatgctgacgcccacaaagaaagaaccaatgagggtgtcattgagtttcgctcttac
tctgatatgaagagagctttggacaagttggatggcactgatatcaacggaagaaaaatc
cgtcttgtggaggacaagcctagacgacgtcgctcctactctgggagcaggtcaaggtct
cgcagccgacgccgttctcgcagcaggagccgccgaagctcacaaagccgttccaggtcc
agatctcgctcaaggtcctgcagcaagaaccgctctcgttccaggtctggtcgcaagtcc
cgctccaggtctaggagaaagtctcactcaaagtccccaacaaagccccgctccaggaag
tcaaagtctcattcccgctcgcgtacgcagaagtcacgcagtcgctccaccagccacaag
tctcgctctcgctccgatgcccgcaaatctcgctccaagagccgctccaaagccaagtcg
gagagggattccaggagccgctcgaaggagaagtccatcagtaggaagtcccgaagccgc
tcggcttctccaagggagaatggaaatggagaccgggccaagtccacctcccgctcgccg
tcccctaaagaggaccgccgtcagtccgagtctcctgggaagcattctgtgtctcgctct
ccatcacgttcgaagtctcgttcccgctctcgatctcgatctgcttctcaagactag
DBGET
integrated database retrieval system
