Carassius gibelio (silver crucian carp): 127968378
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Entry
127968378 CDS
T08819
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X1
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04010
MAPK signaling pathway
cgib04260
Cardiac muscle contraction
cgib04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127968378
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
127968378
04261 Adrenergic signaling in cardiomyocytes
127968378
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
127968378
Ion channels [BR:
cgib04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
127968378
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_3
VWA_2
dCache_2
VWA_CoxE
Phage_holin_6_1
Motif
Other DBs
NCBI-GeneID:
127968378
NCBI-ProteinID:
XP_052425514
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Position
B11:10712889..10754679
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AA seq
1083 aa
AA seq
DB search
MQRNRRISLMHLLLCVVSACWTALEVRGSQPEIPLSVVKLWASAFGGEIKSIASKYSGSQ
LLQKKYKEYEKSVRIEEIDGAKLVKNVAQNMEEIFRKKAEATRRLVEAAEEAHLQHEENP
DLQYEYFNAVLINEVDEDGNSVELGGEFLLEPNDHFNNLSVNLSLSVVQVPTNMYNKDPD
IVNGVYWSEALNKVFVDNFKRDPTLIWQYFGSAKGFFRQYPGVKWHPDEHGVIAFDCRNR
KWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVASILDTLGDDDFFNIIAYNQEVHYV
EPCLNGTLVQADSTNKDHFKEHLDKLFAKGIGLLGNALAEAFTILNEINQTGRGSSCSQA
IMLITDGATEMYDDVFAKYNWPERKVRIFPYLIGRESAFADNLKWMACANKGYFSQISTL
ADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYVDSALAQAHKLGENKGPNPMTTVAMPVF
STKNETKNQGILLGVVGTDIPIQELMKTIPKHKLGIHGYAFAITNNGYILTHPDLRPLYQ
EGQKRKKPSYSSVDLSEVEWEDTEDVLRTAMVKRRTGTFSMEVKRTVDKGKRVLTMHNDY
YFTDIKGTPFSVGVALSRGHGKYFFKGNVSLEAGLHDLEQPDVALADEWTYCNTDEHHEH
RHLTQVQAIKLFMTSRKPHLKCDRELIQQVLFDAVVTAPLEAYWTGLALNKSENSDKGVE
IAFLGTRTGLSRTNLFVVPEQLTNQDFLTAEDKEGVFNADHFPLWYKRAAEQVPGTFVYS
IPFSSGGENKSVVLASTAIQLLDDRKSPIVAAVGIQMKLEFFQRKFWTASRQCNALDGKC
TISCDNEDIKCYLIDNNGFILVSEDTSQTNLFFGEVEGAVMNKLLLMGSFKKINLYDYQA
LCKEYAGSSDSARSLLDPFTTVKWLLTELVLFLLEFNLYSWWNCDSTVKAQRAQRTMMVP
CDTEYPAFVSERTIKETTGNIDCGGCIRTFVIQQIPSSNLFMVVVENKCDCSSAPPVTME
PIEIIYNESLKCDRLKFQKDRRRPKSCHPFHPEENAMECGSANALNFPLVAILFPVLSFL
ISR
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggaaccggagaatttctctgatgcacctcctcttgtgtgtggtgagcgcgtgc
tggacggcgctggaggtacgggggtcccagccggagatccccttatcagttgtgaaactc
tgggcttcagcgtttggtggtgaaataaaatcaatagcttcaaaatactcaggatctcag
ctcttacagaagaaatacaaggaatatgagaagtcggtgcgaatagaagagatcgacggc
gcaaaattggtgaaaaatgtggcgcagaatatggaggaaatatttcggaaaaaagcggag
gccacacgaaggcttgtagaagcggcagaagaagctcatctccagcacgaggagaaccct
gacctacagtacgagtatttcaacgcagtgctcataaatgaggtggatgaagacgggaac
agtgtggagctgggaggagagtttctcctggaacccaacgatcattttaataacctatct
gtcaacctcagcctcagcgtggtgcaggtgccaaccaacatgtacaataaagaccctgac
atagttaatggagtctattggtcggaagccttgaataaagttttcgtggataacttcaaa
agggacccgactcttatttggcagtactttggaagcgctaaagggtttttcagacaatac
ccaggtgtgaaatggcatccagatgaacatggtgtaattgcttttgactgcaggaacaga
aaatggtatatccaggcggccacttctcctaaagatgttgtgattctggtggatgtcagt
ggcagtatgaagggtttaagactgactatagccagacagacggtcgcttcaatactggac
acgctcggggatgatgacttcttcaacatcattgcatacaaccaagaggtccattatgtg
gagccctgtctaaacggcactctcgttcaagctgacagtactaataaggatcattttaaa
gagcacctggacaagttattcgccaaaggaatcgggctcctgggcaatgcactggctgag
gctttcactatcttaaatgagattaatcagactggccgtggaagttcatgtagtcaggcg
atcatgctgataacagatggagccactgaaatgtatgatgatgttttcgccaaatataac
tggcctgagcgcaaggttcgtatattcccctacttgattggccgtgaatctgccttcgct
gataacctaaaatggatggcatgtgccaataaaggttactttagtcagatctccacgctg
gctgacgttcaggagaacgtgatgcggtatttgcatgtgatgagcagacctaaagttatc
gaccatgaacatgacacagtgtggactgaagcctatgtggacagcgcactcgcacaggca
cacaagcttggagagaataaaggcccaaacccaatgaccacagtcgccatgcctgtgttt
agcaccaagaatgaaacgaaaaaccaaggcatcctgctaggcgttgtaggcactgacatc
cccattcaggagttaatgaaaaccatcccgaaacacaagctaggaatacatggatatgcg
tttgccattaccaataacggatatatcctgacacatcccgacctgaggcccctgtaccag
gagggccagaagaggaagaaacccagttacagcagcgtggacctgtccgaggtggaatgg
gaggacacagaggatgttttacgcacagcaatggtgaagagacgaactggcactttctcc
atggaagtaaaaagaacagtggacaaagggaaacgtgtcttgacgatgcacaatgattat
tactttactgatattaaaggaactccatttagtgtaggtgtggcactctctcgaggacat
gggaaatacttcttcaagggaaatgtttcactagaagctggtctgcatgatctggagcaa
cccgatgttgctcttgctgatgaatggacatactgtaacacagatgagcaccatgagcat
cgtcacctgactcaagttcaggccatcaaactgttcatgacaagccgtaaaccacatctc
aaatgtgacagagagctgattcagcaggttttgtttgacgctgtagtaacggctccctta
gaagcgtactggactggactggcccttaataagtctgagaactctgataaaggggttgag
atcgcttttctcggcactcgcactggtctttccagaactaacctgtttgtggttcccgag
cagctgaccaatcaagatttcctcactgctgaagacaaggagggcgtctttaatgcagat
cactttcctctgtggtataaaagagccgcagagcaggtgcccggcacttttgtgtactcc
attcctttcagttcagggggcgaaaataagagtgtggttttggcgagcactgctatccaa
ctactcgatgacaggaagtctcctatagtggcagctgtgggaattcaaatgaagctggaa
ttctttcagagaaaattttggacggccagtcgacagtgcaatgctctggatgggaaatgt
accatcagctgtgataatgaggacattaaatgttatctcatagacaacaatggcttcatc
ctggtctctgaagacacttctcagacgaacctcttctttggagaagtggagggagccgta
atgaacaaactgctcctgatgggctcatttaaaaagattaatttgtatgactatcaggcc
ctctgtaaagagtacgcaggtagcagtgacagtgcacgctctctgctggatcccttcacc
actgtgaaatggctcttgacagaacttgtcttatttctgctggagtttaacctgtacagc
tggtggaactgtgactcgacagtcaaagcccagagagctcagaggacaatgatggtgccg
tgtgacactgaatacccagctttcgtctctgagcgcaccatcaaagagaccacagggaac
attgactgtggtggctgtatacggacctttgtaattcagcagattcccagcagtaacctg
tttatggtggttgttgagaataaatgtgactgtagctccgccccgccggttaccatggag
cccattgagattatttataatgagtctctgaagtgtgacagactgaagtttcaaaaggat
cgcagacggccaaagtcctgtcatcctttccatccagaggagaacgctatggaatgcggc
tcagcaaatgctttgaattttccacttgtagccattttattcccagtgttgtcgttcctg
atcagcaggtga
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