Carassius gibelio (silver crucian carp): 127968398
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Entry
127968398 CDS
T08819
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127968398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgib03021
]
127968398
03036 Chromosome and associated proteins [BR:
cgib03036
]
127968398
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127968398
Coactivators
SAGA/TFTC/STAGA complex
127968398
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
127968398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
UvrD_C_2
Motif
Other DBs
NCBI-GeneID:
127968398
NCBI-ProteinID:
XP_052425553
LinkDB
All DBs
Position
B11:18466768..18480141
Genome browser
AA seq
817 aa
AA seq
DB search
MVTTLTGTSTVQTLNGGNAMDPHTESGTPVSSGPSSSSSSDDASTSVPVVNNGPGVAKGV
TVAQSPNTVIQSSYGNPPAAASSAGPSVTVVRPSMQTAGTGLTINGSNNNNTVSATVANV
ATRGITITTNVTTTTTTPILMNQTPASVSGSKSEATKTIIQPTGTMTLGPGVAKGAVLQG
VARTAAPVTVAAAAGPSPAIRAIAPQVLAPRLPQSTPGQNIHNIQLPPGMVLVRSDSGQL
LMIPQQMLAQMQAQSQAARPAAPTSTTPGQITSAQAPGTPLMARQVTPTTIIKQGSPTAS
STATTTLQRPPVQQASSVGAVLSVQAGTAQRTVTAAPGTTVSSATETMENVKKCRNFLST
LIKLATSGKQSSETVANVKELVKNLLEGSIEAEEFTSRLYKELNSSPQPYLVPFLKRSLP
ALRQLTPDSTAFIQQSQGLQAPAVVLTSSNTAGATSTAPRTLIQPALSNSSQTASLVLQS
QQQGAIVKPPQVTLTTTPMVTLRGQPHSHIVVGQPQVQLKQFQTVAVKQGVVSSTKLAPG
SVSVALAQKNKTKDGAGGTFRDDDDINDVASMAGVNLSEESARILATNSELVGAVTRSCK
DEAFLSASMLQHKILEIGQRFGVTELGPEVVNIVSHATQQRLQNLLEKVSLIAQQKNMTY
KEDSRYEQVEDVRSQLKFFEQLDQLEKQKKEEQEREILMKAAKSRSRQEDPEQLRLKQKA
KEMQQQELAQIQQRDANLTALAAIGPRKKRKLDSPSFGTDTEGSGLCASASGGLNAGASR
QYTRQRITRVNLRDLLFCLENERSTSHSQLLYRALLK
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggtaactactttgaccgggacatccacggtgcaaactttgaacggaggcaatgcaatg
gatccgcacactgaaagcggcactccagtgtccagtggcccatcatcatcatcatcatca
gacgacgcttcaacttctgtcccagttgttaataacgggcccggggtagccaaaggtgtc
actgtcgcccaaagcccaaacacagtgatacagtcttcttacgggaatcctccagcggca
gcatccagtgcaggtccctcagtgacagttgtcaggccatctatgcaaactgctggaaca
ggtttaactattaacgggagtaataacaataacaccgtttcagcgactgtagccaatgta
gcgacacgcggaattaccattactactaacgttactactactacaacgaccccgattttg
atgaaccagactcctgcttctgtctcagggagcaagtccgaggctactaaaactattatc
cagcccaccggcaccatgactctcggccctggagtggccaagggggctgttttacagggg
gttgcgagaactgcggctccggtaactgttgcagcagctgcgggaccgagtcctgccatc
agggccattgcgccacaggtgttagcgccccgactcccacagagcaccccgggccagaac
atccataacatccagctacctccaggtatggtgttggtgcgtagtgatagtggtcagtta
ctgatgatcccacagcagatgttggcacagatgcaggcccagtctcaggccgcccgtcct
gctgcccccaccagcaccacccctgggcagatcacctctgcacaggcacctggaactcct
ctgatggcccgacaggtgactcctaccaccatcataaagcagggctctcctacagccagc
agcacggccactaccacactccagagaccaccggtacagcaggcctcctctgtgggtgca
gtgttgtcagtgcaggcaggaaccgcccagaggactgtgaccgctgccccagggaccacc
gtctcctcagcaacggagacaatggagaatgtaaagaaatgtaggaacttcttgtccacg
ctgataaagctggccactagtggtaagcagtcatcagagactgtcgctaacgttaaagag
ctggtcaagaacctgctggaagggtcgattgaagcagaagagttcaccagcaggctctac
aaagagctcaactcctctcctcagccttatttagtgcctttccttaagaggagtcttcca
gctcttcgacagctcactcctgactccacagccttcatccagcagagccagggcctccag
gcgcccgctgtggtgctgaccagctcgaacacggctggtgccacctccacagctccccgc
acgctcatccagcctgccctcagcaactccagccagactgcctcgctggtattgcagtct
caacagcagggggcaatcgtgaagccccctcaggttaccctgacaaccactcccatggtg
acgctcaggggtcaaccccacagccacatagtggtgggtcagcctcaggtgcagctcaaa
cagttccagacagtcgctgtgaagcagggtgttgtgagtagcactaaactggctccgggc
tctgtgtctgtagcgttagcgcagaagaataaaacaaaggatggtgctggaggaactttc
agggatgatgatgacattaatgacgtggcctcaatggcaggcgttaatctttctgaagag
agtgcacgtatcctggccaccaactcggagctggttggcgcagtcacgcggtcttgcaag
gatgaagcattcctctctgccagcatgctacagcacaagatactagagataggccaaagg
tttggagtgacagagctgggtcctgaggttgtgaacatcgtctctcatgccactcagcag
agactgcaaaaccttctagagaaggtctccttgatcgcccagcaaaagaacatgacttac
aaggaggatagccggtacgagcaggtggaggatgttcgctctcagctcaagttctttgag
caacttgaccagttggagaaacagaagaaagaggagcaggagagagaaattttaatgaag
gcagctaagtcacgctcgcgacaagaggaccccgagcagctgcggctgaaacagaaggcc
aaagagatgcagcagcaggaattggctcagattcaacagagagatgccaacttgacggca
ttggcggctatcggacccagaaagaaaagaaaactggattctccttcatttgggactgac
acagagggctcaggtttgtgcgccagtgcatctgggggcttaaatgcaggagcgtcgagg
cagtacactcgccagcgcatcacgcgtgtaaacctcagggatctgctcttctgtctagag
aacgagagaagcaccagccactcacaactgctctaccgagcccttctcaaataa
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integrated database retrieval system
