KEGG   Carassius gibelio (silver crucian carp): 127968412
Entry
127968412         CDS       T08819                                 
Name
(RefSeq) lysine-specific demethylase 5B-like isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
cgib  Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cgib01009]
    127968412
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cgib03036]
    127968412
Enzymes [BR:cgib01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     127968412
Protein phosphatases and associated proteins [BR:cgib01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     127968412
Chromosome and associated proteins [BR:cgib03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    127968412
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID PHD zf-C5HC2 JmjN PHDvar_NSD Herpes_UL36 PHD_2 GlgE_dom_N_S zf-PHD-like
Other DBs
NCBI-GeneID: 127968412
NCBI-ProteinID: XP_052425578
LinkDB
Position
B11:complement(16688381..16707420)
AA seq 1496 aa
MTHSRPNEFIPPPECPVFEPSWEEFADPFGFINKIRPIAENTGICKIRPPPGWQPPFACD
VDRLHFTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHAERKTLDLYVLYKLV
KEEGGFDVVCKERRWTQIALKMGFAPGKAVGSHLRAHYERILYPYYLFQTGANLMNSQKP
TLTNDTKDKEYKPHDLLERQSVQPAETCTIARRAKRTKGRCFKSEPGEVCEKPNLRRRMG
SYVAKPEPGEDPTLLQDPPFHETYFIGMSRFKLKEIPMQVKEEPIEQQVEGEKSKVEQYI
CLVCAGGGDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQECGKPPVAFGFE
QASRDYTLRTFGDMADSFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIAS
KDFGSGFPVKNGTFKVSAEEEGYLSSGWNLNNMPVLDASVLTHVTADICGMKLPWLYVGM
CFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGYAAEQLENVMKSLAPELFESQPDLLHQ
LVTIMNPNVLMEHGVPIYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTADWMSLG
RQCIEHYRSLNRYCVFSHDEMTCNIATKADSLELELASAVQKDMCAMILEEKMLREKVYK
LGVWHSQQVDYDLLPDEERQCAKCRTTCYLSGITCPCSPDQLVCLHHIEDLCSCPARSYM
LNYKYTLAELKPLFQALTARAESYEDWASKVNKILEADQDNKSDMEELRSLVVEAEKKSY
PETDLLSHLRQVIQNADRCTSMAQQLLNGKRQTRYRSGGGKSQNQLTVEELRSFVKQLYD
LPCTIRQAPFLKALLNRVEQFQQQSSDLLAEDMPGSSALQSLLDEGAGLDVELPQLVVLR
QRLEQARWVEAVQEASDQPADLSLDCMRRLIDQGVGLTPHVCVERTMARLQELLTVCEHW
EEKAHNMLTARPRHSIETLEAAIQEVDNIPAYLPGCLQLKDCVNRAKEWIMEADALQAGG
RIPGLAALSELVSRARSIPVTLEPLPRLESLISEVQAWKESAAKTFLLRNSSHSLLEVLC
PRCENGPQKSKSKKTKDVSVPCKKVEVKLDSLFDVEKALSTSKDTVSAMATLSEVHQKEL
ESLSMLRTSNESKFHSSPSCLAPTVCLCHTVPAGPMLQCELCRDAYHSGCVPGFKDIQTG
LPWLCPLCKRSEKPPLDKVLPLLASLQRIRVRLPEGDALRYVIERTVRWQHRVQLVSPTQ
HPNGKARHIPGTASSPTLVGSNSSFYMLQPCIPLNELSTELEELLVEGLLMQVTLPELQQ
LYSSLLNRFSPSQHSLQSSEHDHQYHIAQDRSPPHRSPSHNKGQDGIPETKKEPERLEKN
SKRRLEKENMEGQNRDKIKKPKKKKPKMNKERRREEKRTTSPSNSLSDLSYSDDSEEDWS
VCSAKQCQQPEGNEVNWVQCDGSCNQWFHQICVGVSAEQAEKEDYICVNCSSDLTE
NT seq 4491 nt   +upstreamnt  +downstreamnt
atgacccattcacgacccaacgagtttattccaccaccggagtgccctgtctttgagccc
agttgggaggaatttgccgacccttttgggttcatcaacaaaatacgtccaattgcagag
aacactggcatctgcaagatccgaccgcccccgggttggcagccaccatttgcctgtgat
gtggacagactgcattttacgccacgcattcagaggctcaatgagttagaggcccagacc
agagtgaagctcaacttcctggaccagatagcaaagttctgggaactgcagggttgtaca
ttgaaaattcctcatgctgagcgcaaaactctggacttgtatgtgctttacaagctggtc
aaagaggagggaggctttgacgtggtctgtaaagagcggagatggacccagatcgcactg
aagatgggctttgctcccggcaaagcagttggctctcaccttcgtgctcactatgagagg
attctctacccatattatttgttccagacaggagctaatcttatgaactctcagaagcca
actctgactaatgacaccaaagacaaggagtacaaaccccacgacctgctcgagcgtcag
tcagtgcaaccagcggaaacctgtactatcgcccgcagagctaaacggaccaagggccgc
tgttttaaatcagaaccgggtgaggtgtgtgaaaaacccaacctgaggaggagaatgggc
tcatatgtggcaaaaccagaaccaggcgaagacccaactcttctgcaagacccccctttc
catgaaacatattttattggaatgtcccgatttaaattaaaggaaattccaatgcaggtg
aaagaagaacccattgagcagcaagttgaaggtgaaaaatcaaaggtggagcagtacata
tgcttggtatgtgcgggtggaggtgatgaagatagactcttgctttgtgatgggtgtgac
gacagttatcacaccttctgtctgatcccacccctccatgatgtccccaaaggtgactgg
agatgccccaagtgcctggctcaggagtgtggtaagccaccggtggcgtttgggtttgag
caggcctccagagactacacccttcgcacctttggagatatggctgactctttcaagtct
gactactttaacatgcctgttcatatggttcctacagagctggtggagaaagagttttgg
aggctggttagcactattgaggaggatgtcactgtagaatatggggcggatattgcttca
aaagattttggaagtggattccctgttaagaacggcacatttaaggtctcagcagaagag
gagggttatctgagcagtggctggaacctcaacaacatgccagttttggatgcatctgtg
ctgactcatgtcacggcagacatctgtgggatgaagctcccatggctttatgtgggcatg
tgcttctcctccttctgctggcacattgaggaccattggagttattccatcaactatctg
cattggggagagccaaagacgtggtatggtgctcctggatatgctgctgagcagttggag
aatgtgatgaagagcctggcccctgagctctttgagtctcagccagacctgctgcaccag
ctggtcaccatcatgaacccaaatgttctcatggagcatggagtaccaatttaccgtaca
aaccagtgtgctggcgagtttgtcataacctttccgagggcctatcacagtggtttcaac
cagggctttaactttgctgaggcagtcaacttttgcactgcagactggatgtctcttggt
cgccagtgtatcgagcactaccggtccctcaacagatactgtgttttctctcacgatgag
atgacctgtaatattgccaccaaggcagactctctagagttagaactggcctctgctgtc
cagaaggacatgtgtgccatgattctggaagagaagatgctccgtgagaaagtctataaa
ctgggcgtgtggcactcccaacaggttgactatgatttgctgccagatgaggaaaggcag
tgtgctaagtgccggaccacctgttacctgtctggcatcacttgtccctgtagccccgac
cagctggtctgtctccatcacatcgaggacctctgctcttgccctgctagaagctatatg
ctcaactataaatacacacttgccgaactgaagccattgttccaggctttgacagctcgt
gctgagtcctatgaagactgggcatctaaagttaacaagattttggaagcagatcaagat
aataaaagtgatatggaggagcttcgttcattggtagtagaagccgagaagaagtcatac
cctgagactgacttgctaagtcacctgcgtcaagtcattcagaatgcagatagatgtacc
tcaatggcccaacaactcctcaatggcaagagacagactagatatcgttccggtggggga
aagtctcagaaccagctcactgtggaggaactgaggtcatttgtcaaacagctgtatgac
ctgccctgtaccatccgacaggcccctttcttaaaggctcttttgaaccgcgtcgaacag
ttccagcaacagagctcggatctccttgcagaggacatgcctggttcatctgctcttcag
agcctcctagatgaaggtgcaggcttggatgtggagttgcctcagctggtggtgttgagg
cagaggctggagcaggcccgctgggtggaggccgttcaggaagccagcgatcagccagcc
gacctcagtctagactgcatgagaaggctcatagatcaaggagtgggcctgacaccgcat
gtctgtgtggaaagaaccatggcccgcctgcaggagctgctcactgtctgtgaacactgg
gaagaaaaggcccataacatgctcactgctaggccccgtcatagtattgagactcttgag
gcagctatacaggaagttgacaacatcccagcatacctgcctggctgtcttcaacttaag
gactgtgtaaaccgggccaaagagtggataatggaagcagatgctcttcaggctggaggc
cgaattccaggtctcgctgccctatctgaacttgtgtcaagagccagaagtattccggta
acgctggaaccactgcctcgactggaaagtttaatatcagaggtacaggcctggaaggag
agtgcagctaaaactttcctgttgaggaactcatcccattctctcctcgaggttttgtgt
cctaggtgtgagaacggaccgcagaaatcaaagtctaaaaaaaccaaggatgtctcggta
ccctgcaagaaagttgaagtaaaactagactccctttttgatgtggaaaaggcgctttct
acgagcaaagatacagtttcagcaatggccactctcagcgaggtgcatcagaaagagctg
gagagcctgtctatgttgaggacctcaaatgagtcaaagtttcattcttcacccagctgt
ttggcccccacagtgtgcttgtgtcacactgtcccagcaggccctatgctacagtgtgaa
ctctgtcgagacgcctaccacagcggctgtgtgccagggttcaaggacatccagacaggg
ctaccatggttatgcccgctctgcaagcgctccgaaaagccgcccctggataaggtgctt
cccctgcttgcttccttacagcggattcgggttcggcttccagagggtgatgccctacga
tatgtgattgagagaacggtgcgctggcaacacagagtgcagctggtttctcctacgcag
catccaaatggaaaagcaagacatattcctggaacagcatcatctccgacactggtgggg
agcaacagctctttctacatgctgcagccatgtattcctctcaatgaactcagtactgag
ttggaggagctgttggtagaaggtcttctgatgcaggtgactttacctgagctccagcag
ctttacagcagcctgctcaacaggttttcaccatcccagcactccctgcagagcagcgaa
catgatcaccagtatcacattgctcaagacagaagtccacctcaccggagcccctcgcac
aacaaaggacaggatggcattccagagaccaagaaggaaccggagaggcttgagaagaac
agcaagcggcgtctagagaaggagaacatggaagggcaaaacagagacaagataaagaag
cccaagaaaaagaagcctaaaatgaacaaagaaaggcgaagagaggagaaacgaaccacc
tccccctccaactccctttctgacctatcgtattccgacgactcagaggaggattggtct
gtgtgctcggcaaagcagtgtcaacagccagaaggaaacgaggtaaactgggttcagtgc
gatggcagctgtaaccagtggttccaccagatttgtgtgggagtgtctgctgagcaggct
gagaaagaggactacatctgcgtcaactgctcaagcgatttgacagaatga

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