Carassius gibelio (silver crucian carp): 127968432
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Entry
127968432 CDS
T08819
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127968432
Spliceosome [BR:
cgib03041
]
Common components
Common spliceosomal components
General mRNP proteins
127968432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RRM_5
RBD_DEAH11
RRM_7
Ig-CFAP74_2
Motif
Other DBs
NCBI-GeneID:
127968432
NCBI-ProteinID:
XP_052425611
LinkDB
All DBs
Position
B11:complement(16958050..16964230)
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AA seq
525 aa
AA seq
DB search
MADDFDIEAMLEAPYKKDDSKSLSTNGHEERSKKKKKSKSRSRSRSRERKRSRSHDRKRS
HDRRRSRSKERKRSRSRERRRSRSRSKERGGRYRAPFSGLKFNGVPRGKTGPPPAIKLSR
KRSRSRSPFKKDKSPIRQPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDV
RIISDRNSRRSKGIAYIEFVDTTSVPLAIGLSGQRLLGVPIIVQASQAEKNRAAALANNL
QKGSSGPMRLYVGSLHFNITEDMLRGIFEPFGRIDSIQLMMDSETGRSKGYGFITFADAE
CAKKALEQLNGFELAGRPMKVGHVTERTDASTASSFLDNDELERTGIDLGTTGRLQLMAR
LAEGTGLQIPPAAQQALQMSGSMVAMAAATAAMNPGLSFNINVPTNQPLNLPSQPIATHC
FQLSNMFNPNSENDPGWEVEIQDDVIEECNKHGGVIHIYVDKKSAEGNVYVKCPSIPAAM
AAVSALHGRWFGGKMITAAYVPLPTYHNLFPESVQATQLLMPSRR
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgattttgacattgaagcaatgctggaggctccatataaaaaggatgacagc
aagtccttaagtaccaatggccacgaggagcggagtaagaagaaaaagaagagcaaaagt
cgcagcagaagtcgcagtcgggaaaggaagagaagcaggagtcacgatcgcaagaggagt
catgaccgcagaaggagccgcagcaaagaacggaagcgcagccgcagcagggagagacgg
cgcagccggtccaggagcaaggaacgtggtggtcgttacagagccccattttctggcctg
aaatttaacggtgttcccagggggaagactggcccaccacctgccatcaaactaagccgt
aaaaggtctagaagccgcagtcctttcaagaaagacaaaagccctataagacagcccatt
gataatctcacccctgaagaaagagatgcacgaacagtattctgcatgcagctggcagca
agaatccgaccacgagacctggaagaattcttttctgcagtgggaaaagtacgagatgtg
agaatcatctctgatagaaactccagaagatccaaaggaattgcatacattgagtttgtg
gacaccacctctgtacctttggcaattggcctttctggtcaaagacttctcggagtacca
atcattgtgcaggcctcacaggctgaaaagaacagagcagctgcgttggccaacaactta
cagaagggcagttctggacctatgagactgtatgttggctcattgcattttaacatcaca
gaagacatgctcaggggcatcttcgagccatttggaaggattgatagtattcaactgatg
atggacagtgaaacaggacgatcaaaaggatatggctttatcacatttgctgatgctgaa
tgtgctaagaaggctctggaacagcttaatggctttgagttggctggcagaccaatgaaa
gtgggacatgtgacggagcgcactgatgcctcaactgccagctccttcctggacaatgat
gagctggaaaggaccggcattgatctgggaacgactggtagactgcagctgatggctaga
ctggctgagggtactggtctgcagatcccacctgctgctcaacaggcccttcagatgagt
ggctccatggtagccatggctgcagctacggctgcaatgaaccctggattgagttttaac
atcaatgtgcccacaaaccaacctttgaatctaccttcacaaccgattgcaacacactgt
ttccaactgtctaacatgttcaatccaaactcagaaaatgatcctggttgggaagttgag
attcaggatgatgtcattgaagagtgcaacaaacatggtggagtcatacacatatatgtg
gacaagaaatcagctgaaggtaatgtctatgtgaagtgtcccagcattcctgctgctatg
gctgcagtgagtgcattacatggacgttggtttggaggtaaaatgatcacagcagcttat
gtccctcttcctacataccacaaccttttcccagagtcagtgcaggcaacacagcttctt
atgcccagtcgccggtga
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