Carassius gibelio (silver crucian carp): 127968437
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Entry
127968437 CDS
T08819
Name
(RefSeq) transcription factor SOX-12
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127968437
Transcription factors [BR:
cgib03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127968437
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Menin
Motif
Other DBs
NCBI-GeneID:
127968437
NCBI-ProteinID:
XP_052425616
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All DBs
Position
B11:17020600..17024733
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AA seq
369 aa
AA seq
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MTLGNLLNRSQRCIMVQQRTHKYSSVMDGNSTREVFVGLAAEDDAEGFGHVPSKKDPNWC
KTPTGHIKRPMNAFMVWSQIERRKIMEQWPDMHNAEISKRLGKRWKLLPDYEKIPFIKEA
ERLRLKHMADYPDYKYRPRKKSKISTHVKLGEKLPMKSSKPHSGRSPGLSCKGLKIKPTS
TKPKMNFTGNKYKSYSESMSDDDTMDVNLESPVTLQDDHNPSGHFVLHQQATIPSEDQQP
VPELKMKVPISQTSSIQSVSSENECQAVPESTTSEPQGSTSGRSSTPTSTSSSSLVSSAC
SDEELDEELLHIISNSMPMDCSTLDKDFEAFNANSGSHFDFPDYCTPEVNEMISGDLLVP
SISDLVFTY
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgactctagggaacctgctgaatagatctcagcgctgcatcatggttcagcaaaggacc
cacaaatactcatcagtcatggatggcaattctaccagagaggtctttgtgggactggcg
gcagaggacgatgcggaggggttcggacatgtaccttctaagaaagaccccaactggtgc
aaaactccaactgggcacatcaagagaccaatgaacgctttcatggtctggtcccagatt
gagagacgtaagatcatggagcagtggcctgacatgcacaatgctgagatttcaaagcgt
ctcggaaagcgctggaaactactgcctgattatgagaagatacccttcatcaaagaggct
gaaaggttgcgtctaaagcacatggctgactatcctgactacaaataccggcccaggaag
aagagcaagatctcaacccatgtgaaacttggagagaagttgcctatgaaatccagcaag
ccccattcaggaaggtctcctgggctgtcctgcaaagggctaaagatcaaacccacttct
accaagcctaaaatgaactttactggcaataaatataagagctacagtgagagcatgagc
gatgatgacacgatggatgtaaatttagaaagtccagtgactttgcaagacgatcacaac
ccatcaggtcactttgtccttcaccagcaggctaccattccctctgaggaccagcaacca
gttcctgagctcaaaatgaaagtgcccatctcacaaaccagcagcatccagagtgtctcc
tcagagaatgagtgccaggctgtcccagagtccaccacgagcgaaccacaaggttcgaca
tctggaagatcctccacaccaacctcaaccagttcctcctctttggtgtcctcagcatgt
tcggatgaggaactggatgaggaactcttgcatatcatttctaacagtatgcctatggac
tgctccactctggacaaagactttgaagcgttcaatgctaactcaggatcccattttgac
ttcccagattactgcactccagaggtgaatgaaatgatttctggggacttgctcgtgccc
agcatctcagaccttgtgttcacctactaa
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