Carassius gibelio (silver crucian carp): 127968604
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Entry
127968604 CDS
T08819
Name
(RefSeq) zinc finger and BTB domain-containing protein 40 isoform X1
KO
K10512
zinc finger and BTB domain-containing protein 40
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127968604
04121 Ubiquitin system [BR:
cgib04121
]
127968604
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
127968604
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
127968604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
BTB
zf-C2H2_jaz
zf-C2H2_6
zf-met
Zf-C2H2_ZNF451_C
zf-C2H2_8
zf-C2H2_11
zf-C2H2_15
zf-C2H2_ZNF462
Zap1_zf1
BTB_KLHL33
zf-C2H2_ZNF462_11
CENP-R
zf-C2HC_2
Sorting_nexin
zf-C2H2_ZN142
Motif
Other DBs
NCBI-GeneID:
127968604
NCBI-ProteinID:
XP_052425867
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Position
B11:10850188..10862230
Genome browser
AA seq
1079 aa
AA seq
DB search
MELPNYSRQLMQQLHALRKERQFCDCSILVGETPHPAHKLVLAASSMLLKSVLEGSDSIS
IDTDLLSSQEFSSLLDMVYTGKLPPGKHNFTRLIAAADSLQMFDVAVGCKNILTDLMKRT
SVETETESMIPQVIKHCVKEPSESEELKRDKNSFEEDRAVELISQNQAGVTKILQNGRSY
VKVLEIWDTVSTEVRQVILESFKGDPPADEVYQRLLNCVKVEKVVSAQTVLTLLEQLKCL
NPEQGSVLEDEGNKSCPEPEVPASGVRWSSGLLAHISELSHHLSSVSNLSELLTSAVNRC
TNEVEKEVVLQCCSGPSSVEVVESLLCKLREMTVSEETFLMLLHEVKESSSDVLQLLQSL
KDTRGDTAEDRSGVELLRIYQNRLIELNLDLQLIEQSFKKGPDMNANERECIKALLGEKG
DAEVVGRLISAALDGSLQAVTVWRLLLWIETHSPELQLLMQEVKEKPNAPKLLQTIKDID
VLFKHKSLILETVSNITLLEQGLNTVDHGTEEFAEFLQSCRRADGELESVHQTVERVLSR
DSEFASSLCQLLSANQQNVPQLKDLKHPGPLPDSAKSEVEQEESTADSEDDDGEDPKTKG
RRKAVPVSYGCEWCKKAFDFKCRLIKHRKGCALAPGKEQRCSECSVAFPTLKSLHQHCME
VHGGPPAKKKKTEQVPCDMCDKTFKHSSGLLYHKRTEHFEERPYACEECGAKFAATSSLK
NHMRLHTGEKPFHCKHCDMSFSVAAALSYHTKKKHAEGKMYCCQYCSASFAQSIELTRHV
RTHTGDKPYVCRECGKGFKQANGLSVHLQNFHNITEPHDCQKCRVSFSSLDELRQHIQEV
HPKELHQCPECSKIFNSEANLEKHMNIHDGNKPYGCKMCKKSYQTLSGLWYHNRTAHPES
ASAQGNKAIKSLLQCDKCDKTFSNRNSLLKHQITNHKEVHLWKCVNCDSTMTSEQELQQH
ICSGQASQSGSVFSCVVCSLHFTSETEFQQHFLSKHLQVMQEEAQTQASSAQTVIQCEDA
AGQEAEQVISLDQSQIEGSPQLFVALGDQQEAASGAGIVAVSMEDLLNGTVTLICEEGQ
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggagctcccaaactacagccggcagctcatgcagcagctgcatgctttacgtaaagag
aggcagttttgcgactgctccatcctggtgggtgagaccccgcaccccgctcacaagcta
gtgctggcggcctccagtatgttactgaagtctgttctggaaggttctgacagcatctcc
atcgacacagacttactgtcctctcaagagttttcttctcttctggacatggtgtacact
ggtaaactgcctcctggtaaacacaacttcacccgactcatcgccgctgcagacagcttg
cagatgtttgatgtggccgttggttgtaagaacattcttactgacctcatgaagcggact
tctgtcgagactgagactgagtcgatgatacctcaggttattaaacattgtgttaaggag
ccgtctgaatcggaagagcttaaaagggacaaaaatagttttgaagaggacagagcagtt
gagttgatctctcaaaatcaagctggggtcacaaaaatcctccagaatggacgatcgtat
gtgaaggttcttgaaatatgggatacagtatccacagaagtgcgccaggtcatactggag
agcttcaaaggagatccaccagcagatgaggtttaccagaggttgctcaattgtgtgaaa
gtagagaaagttgtgtcagctcaaacagtccttactttgttagaacagctaaaatgttta
aatcctgagcaggggtcagttttggaggacgagggaaacaagagctgtcccgagccagaa
gttcctgcatcaggagttcggtggtctagtgggcttttggcccatatatcagaactatct
catcacctctccagtgtcagcaacctctcagagcttttgaccagcgcagtgaacagatgt
acaaatgaagtggaaaaagaggtagtgctgcagtgctgttctggtccatcttctgtagag
gtggtggaaagtttgttatgtaaactccgagagatgaccgtaagtgaagaaacgtttctg
atgctgctccatgaggtgaaggaaagctcctcagatgtgcttcagcttctgcagtccttg
aaagacacaaggggtgacacagcagaagaccgcagtggggtggagttgttgaggatatat
cagaacagactcatagaactgaatctggacctccagcttatcgaacagagctttaaaaag
ggtccagatatgaatgcaaatgaaagagagtgtattaaagctcttctgggagagaaagga
gatgctgaggtggttgggaggctgatatctgcagcgctggatggttcactgcaggccgtg
actgtttggaggcttctgctgtggatagagacacacagtccagagctgcagctcctcatg
caggaggtcaaggagaaaccaaacgctccaaaacttctccaaaccattaaagacatagat
gtgctctttaagcacaaatcactcatcctggaaacagtcagtaacattaccctgctcgaa
caaggtttgaacacagtggatcatgggacagaggaatttgctgagtttctccagagctgt
cggagggccgatggtgagctggagtcagttcatcagactgtggagagagttttgagtcgt
gactcagagtttgccagttcactgtgccagctgctgtctgccaaccagcagaacgtcccg
cagctgaaagacctcaaacatcctgggcctctgccagattctgcgaaatctgaggttgaa
caagaagaatctacagcagactctgaggatgatgatggagaagaccccaaaacaaaaggc
agaagaaaggctgtccctgtgtcgtacgggtgcgagtggtgtaaaaaggcgtttgacttt
aagtgtcgtctgataaagcacaggaaaggctgtgccctggcgccggggaaggagcagcgc
tgctcagagtgttcggtggcctttccgacgctcaagagccttcaccagcactgcatggaa
gtccatggtggccctccggcgaagaagaagaaaacagagcaagtgccatgtgacatgtgc
gacaaaactttcaaacactcttcaggtcttttatatcataaacgcactgaacatttcgag
gagagaccatacgcatgcgaggagtgcggggcgaagtttgctgctacctcgtctctgaag
aaccacatgcgtctacacacaggagaaaaacccttccactgcaaacactgcgacatgagc
ttttctgtggccgctgctctctcataccacaccaagaagaagcatgctgagggtaaaatg
tactgctgtcagtactgctcagcctcatttgctcagtccattgaactgacgcgtcacgtc
cgcacgcacacgggagacaaaccttatgtctgcagggaatgcggcaaaggcttcaaacaa
gccaacgggctgtccgtccatctgcagaacttccacaacattacagagccacatgactgc
cagaaatgccgagtgagtttctcctctctggacgagctccgtcagcacatccaggaggtg
catcccaaagagctgcaccagtgtcccgagtgcagcaagatcttcaacagtgaagccaat
ctggagaagcacatgaacattcatgacgggaacaaaccttacggctgcaagatgtgtaaa
aagtcctatcagacgctctctggtctgtggtaccacaatcgtacggctcaccccgagagc
gcatctgcccagggcaacaaagctatcaaatctctgctgcagtgtgacaagtgtgacaag
acatttagcaaccgaaatagtctgttaaaacaccagataaccaatcacaaagaagtgcac
ttgtggaagtgtgtgaactgtgacagcactatgacgagtgagcaggagctccagcagcac
atatgcagcggtcaggcgagtcagagcggctctgtgttcagctgcgtggtctgctctctc
cacttcacctcagagactgagttccagcagcacttcctgtccaaacatctgcaggtcatg
caagaggaagcacagacacaggcctccagtgctcaaacggtgattcagtgtgaggatgca
gccggtcaagaggcggagcaagtgattagcctcgaccaatcccagattgaagggtctccg
cagctgtttgtggctctgggtgatcagcaggaagcagccagtggcgctggaatcgtggct
gtgagtatggaggatctactgaacggcaccgtcacgctcatctgtgaagagggccagtga
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