Carassius gibelio (silver crucian carp): 127968637
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Entry
127968637 CDS
T08819
Name
(RefSeq) protocadherin-17
KO
K16499
protocadherin delta 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
127968637
Cell adhesion molecules [BR:
cgib04515
]
Cadherins
Protocadherins
127968637
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
PepSY
Cadherin_C_2
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
127968637
NCBI-ProteinID:
XP_052425908
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All DBs
Position
B11:12846722..12912148
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AA seq
1137 aa
AA seq
DB search
MHLSVFLFLLLWARALTLKNLNYSIPEEKIQGVIGNIAKDAELELGEQGKKSNFRVLENS
APHLIDVDPESGLLYTKQRIDRETLCRQNPKCQLSMEVFANDKEICMIKVEIQDINDNAP
SFPSEQIDIDISENAAPGTRFPLGAAYDPDTKENGLKTYQITRDDYSIFSLDVKSRGDGT
KFPELVVQRSLDREERSHHTLILTATDGGEYPKSGTMQINVKVTDSNDNSPVFEQPSYVV
EIPENSPPGMVLIDLNATDPDEGINGQVTYSFSCYVPDRIKELFSIDPRTGVIKIQGKID
FEENPIIEVDVQAKDQGPNPIPGHCKITVKVLDRNDNWPSIGFVAVRQGAVSEAATPGTV
IALVRVTDKDSGRNGQLQCRILGNVPFKLEENYDNFYTVVTDRPLDREVKDEYNITIVAK
DNGNPPLNSTKSFTVKILDENDNAPRFTKMVYLLQVPENNIPGEYLGSVLAHDPDLGQNG
TVSYSLLPSNVSEESITTYVNIKPTDGAIYALRSFNYEQTKYFDFKVQAKDSGNPHLESN
TTVRVSVLDVNDNIPVIVLPLLQNDTAEIHVPRNVGVGHIITTVRAVDNDFGESGRLTYE
ISDGNEEHLFEIDSVTGEVRTAQPLWEEVAPVVELIIKVTDHGKPSLSAMAKLIVKAYSG
PLPEGEPRINAEHHNWDMSLPLIVTLSIISIMLLAAMITIAVKCKRENKEIRTYNCRIAE
YTHPQLGKGKKKKINKNDIMLVQSEVEERDTMNVMNVVSSPSLATSPMYFDYQTRLPLSS
PRSEVMYLKPTANNLSVPQGHVGCHTSFTGPVTNTTETPVNRMSIIQTDNFPAEPNYMGN
RQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSAKEALKMKATGLKPQ
PLEQEEDCLNCTEECLVLGHSDRCWMPQFPAGAGGAGTPQAEGSDYRTNLFVPAGMEAVA
VETETYETVCNPNGKKTFCTFGKERRDHTILVANVKPYLKTKRALSPLLQEVPSASCSPT
KGCSKGSPCSSAKGMGDGAEGKPSTSHYGPPDGQYISPSKQNKEQGYSTLPPSDPVAKVL
AEARSRISQETAVEMDSVLEQGGGEMGRGTMDADQVVRDIDKLLQDCRGNENTPIRK
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgcatctttctgttttccttttccttcttttatgggcacgggccctgacattgaaaaac
ttaaactactcaatacctgaggagaaaattcaaggcgtcattggaaacattgccaaggat
gcggagctggaactgggagagcaggggaaaaaatccaacttcagggtgttggagaactct
gccccacaccttatcgatgtggatcccgaaagcgggctattatacactaaacagcggatt
gatagggaaacactgtgcagacaaaaccccaagtgccagctctccatggaagtgtttgcc
aatgacaaggagatctgcatgattaaagttgagatacaggacataaatgacaacgcacca
agctttccttctgaacagatcgatatcgacatatctgagaacgcagccccaggtacacgt
ttccccttgggtgctgcctatgaccctgacactaaggagaacggcctgaaaacatatcag
atcacacgggatgattatagcatattctctttggatgttaaatccagaggggatggaaca
aaattccctgaattggtcgttcagaggtccttagatcgagaggaacgtagccatcacact
ttaattttaactgccacagatggaggggaatatcccaaatctggcacaatgcaaattaat
gtgaaagtcactgattccaatgacaatagccctgtgtttgaacagccttcatatgtagtg
gagatacctgaaaattcacccccaggcatggtactgatagatttaaatgctaccgatcct
gatgaagggattaatggacaggttacttattcctttagctgttatgttccagacaggatc
aaagagttgttctcgatagacccccgaacaggtgtcataaagattcagggtaaaattgac
tttgaggagaacccaattatagaagttgatgtccaggcaaaggatcaaggccccaaccca
attcctggccattgtaaaatcacagttaaagttcttgacaggaatgacaactggccatcg
ataggttttgtagctgtgcgtcagggggcggttagtgaagcagcaaccccagggacagtg
atcgcactcgtcagagtcacagacaaagactcgggccgcaatgggcagctccagtgtagg
attttggggaacgttcccttcaagctggaggagaactatgataacttctacacagtagtg
accgacagacccctggacagggaggtaaaagatgagtacaacatcactattgtggccaaa
gacaatggcaacccacccctgaactcaacaaagtctttcactgttaagatcttagatgaa
aacgacaatgcaccccgcttcacaaaaatggtctaccttctacaggtccctgaaaacaac
atcccaggggaatacctgggttctgttcttgctcatgacccagatttgggccaaaatggt
actgtgtcctattccctccttccttcgaatgtaagcgaggagtctatcactacatacgtt
aacatcaaacccaccgatggtgcaatttatgccctgaggagtttcaactatgaacaaacc
aagtattttgacttcaaggtccaggcgaaggattcaggtaaccctcacctggagagcaac
accactgtccgtgtcagtgtgctggatgttaatgataacattcctgtcattgtccttccg
ttacttcagaatgacactgctgagatccatgtgcctcggaacgtgggagttggacacatt
attaccactgtgagagctgtggacaatgattttggtgagagtggtcgcctcacttacgag
atctcagatggcaatgaagaacacttgttcgagattgattcagtgacgggtgaagtacgg
acagcccagccactgtgggaggaggttgcacctgttgtggaactcatcatcaaggtgact
gaccatggcaagccatcactgtccgccatggcaaaacttatcgtcaaagcctactccggg
cccttgccagaaggtgaaccgcgcatcaatgcagaacaccataactgggacatgtcgctc
ccgctaatagtaaccctgagtatcatctcaattatgctccttgctgccatgatcaccata
gcagtcaagtgtaaacgggaaaacaaggagatccgcacatacaactgtcggattgcagag
tacactcacccacaacttggcaagggcaaaaagaagaagatcaacaagaatgacatcatg
ctggtgcagagcgaagtggaggagcgggacaccatgaatgtgatgaacgttgtcagcagt
ccctccctggccacatcccccatgtactttgactaccaaactcgtctgcccctcagctct
cctaggtcagaggtcatgtacctcaaacccaccgccaacaacctcagtgttcctcaaggg
catgttggctgtcacaccagcttcacgggacctgttacgaacaccacagagacgccagtg
aacaggatgtcaataatacagacagacaattttcctgctgagcccaattacatgggtaac
aggcagcagtttgttcaaagcagctccacatttaaagatcccgagcgagccagtctaaga
gacagtggccacggggacagcgaccaagcggatagtgatcaggacactaataaaggctcc
tgctgtgacatgtctgctaaggaagcactcaagatgaaggccactggcctgaagcctcag
ccacttgagcaggaggaggattgtttgaactgcacggaggagtgtctagtgctggggcac
tctgaccgttgttggatgccccagtttcccgcaggggctggaggagcaggaactccccaa
gccgagggctcggactaccgcaccaacctcttcgtaccggctggcatggaggcagttgca
gtggaaaccgaaacttatgagacggtgtgcaaccccaacggcaaaaaaactttctgcaca
tttgggaaggagcgtcgagaccacaccatcctcgtggcgaatgttaaaccttacctaaag
accaaacgtgccctcagccctctcttgcaggaggttccgtctgcttcatgtagccctacc
aaaggctgcagtaaaggttccccgtgctcttcggccaaagggatgggcgacggagcagag
ggcaagcccagcaccagccactacggacccccagatggacagtacatctccccaagcaaa
cagaacaaagagcagggatattccacgctgcctccctctgaccccgtagccaaagtccta
gctgaagcacgttcgcggatcagccaggagacagcggtggaaatggacagtgttttggag
cagggcggaggagagatgggccgcggcaccatggacgcagaccaggtggtcagagacatc
gacaaactgctgcaggattgtcggggaaatgaaaacacccccatcagaaagtaa
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