Carassius gibelio (silver crucian carp): 127968775
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Entry
127968775 CDS
T08819
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04020
Calcium signaling pathway
cgib04080
Neuroactive ligand-receptor interaction
cgib04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
127968775
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127968775
04082 Neuroactive ligand signaling
127968775
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
127968775
Ion channels [BR:
cgib04040
]
Ligand-gated channels
Glutamate (ionotropic)
127968775
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
NMDAR2_C
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
127968775
NCBI-ProteinID:
XP_052426070
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All DBs
Position
B12:7186638..7230356
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AA seq
1328 aa
AA seq
DB search
MATPQGCWGPSLQLLLFFHLLLNVVPPCRGRPFFGPPTVNVAVVFSGLAHHSEIKGRLSP
ENFLDMPLEVNPITVLVNDTNPRALLTRICQTMAAESLHGVVFEDDVDSEAVAQILDFIS
SQTSIPIVGISGGSAVVIPHKAEGSTFLQMGASIEQQINAMFKVMEEYNWGNFVVITSLY
PGYETFVDYIRSFTDTSYFLWELRDVLSFEMSVGANDIRSRRLLQQVDSQVYLVYCSHEE
AQYLFRMASDVGLLGPGYIWVIPSLAVGNPEVSPPDSFPVGVISIITDRWRKTLRQRVRE
GVAVIVKGVHSFHKNRGFIPDGHSDCNSPVKSYANNSLFRHMLNVSWEHKDLSFNTDGYL
TNPSMVIIALDRERHWDKVGSYEGGILQMRYPVWPRYGSFLEPVSDNRHLTVATLEERPF
VIVESVDPATGTCVRNTVPCRRQSNRTESVTGHNEPYTKLCCKGFCIDILKKLSRTIKFS
YDLYLVTNGKHGKMVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIVDFSVPFVETGIS
VMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNRSLVSAKAP
GGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAAFMI
QEQYIDTVSGLSDKKFQKPQEHYPPFRFGTVPNGSTERNIRSNYPDMHTHMIKYNQKGVE
EALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSRWKRP
IDLALLQFLGDGDTQRLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLV
FAWEHLLYWKLRHSVHKSDHLDFLLAISRGIYSCFNGVEDIGRSTSIQNPDITANYAQAN
MLKMLQTAKDIVSSAKVENSLDNATKTIENWSRHSGSLPARIPLVTTTEKLPGHFSYITN
VTENHIPHMQRSITPPFTQHTNISSPPPMVNQRVLTRPTPLRYTLPARTRGLYDGMLPVS
SLSTPHLAMHDPPSNLAHPGSSFVPYRDIYSEHHKPCHSDFSDAVRRKKRPQNLLVESMD
LRGLHDYKNQSTCHNEANSFAENHLTSSFRENPFGAADTACNTCVKTYFDPTFDDIPLIG
KRKLHRRPSFLKATWGPDRVRFPGDRPTATASPQVTIPDLFPCVDVHGRVRNTLCYTQPM
DHNYLHAFRRNPRKSQKLRHSQSTRLPSYKEAIFHNVAAVRRASSLVHRPYSYPELPVYQ
SPLSYGPAELCNIFPCMGHPSDSVYGGYRAPTHQQNDHLVPVPGSRVVHSSPVVPMTWGR
ISSLESEV
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atggccactcctcaagggtgttggggtccctctcttcaactcctcctcttctttcatctg
ttactcaatgtagtgcctccctgccggggacgtccattcttcggccctcctacagtcaac
gtggctgtggtgtttagtggtttggcccaccacagtgagatcaagggccgtctaagtcca
gaaaacttcctagacatgcccctggaagtgaaccccatcaccgtgctggtgaatgacact
aaccccagggctttactcacacgtatctgtcagactatggcagcagagagcctccacgga
gtggtgtttgaagatgacgtggactcagaagctgtggcacaaatcttagactttatctcc
tctcagacgtccatccccatcgtaggcatcagtggaggttctgcagtagtcatcccacat
aaagctgaaggctctacctttctccagatgggagcttctatagagcagcagataaatgcg
atgttcaaagtcatggaggagtacaactggggtaactttgtagtgattactagcttgtat
cccggctacgagaccttcgtggactacatccgctccttcacagacaccagctacttcctg
tgggagctgcgggatgtgctgagctttgagatgtccgtgggggccaatgacatccgctca
agaagactactacagcaggtggactcgcaggtatacctagtgtactgttcccacgaggag
gcacagtacttgttcaggatggcctctgatgtggggcttctagggcccggatacatctgg
gtcatccccagtctggctgtggggaaccctgaagtgtcccctcctgacagtttccctgtg
ggcgtcatcagtattatcacagaccgctggaggaaaacactgcgccagagggttcgggaa
ggagtcgcagtcatagtaaaaggggtgcacagctttcataagaacagaggattcattccc
gatggtcacagtgactgcaatagtcctgtcaaatcgtacgccaacaattctctcttcagg
catatgctaaatgtgtcatgggagcataaggacctctccttcaacactgatggctatctc
accaatccttccatggtgatcattgctttggatcgagagagacactgggacaaggtagga
agctacgagggagggattctgcagatgcgataccctgtatggccccgttacggcagcttc
ctggagcccgtgtctgacaaccggcacctgactgtggccacgctggaggagaggcctttt
gtcatcgtggagagtgttgatcctgccacaggcacttgtgtgcgtaatactgtgccgtgt
cgtcgacagtccaacagaactgaaagtgtaacaggtcataatgagccttacaccaaactc
tgctgcaaaggtttctgcatagacatcctaaagaagctctcacgcaccatcaagttttca
tacgacctttatctggtcacaaatgggaaacatggcaagatggtccgtggcatctggaat
ggcatgattggagaggtcttctacaagcgtgcagatatggcaattggctcgcttaccatc
aatgaagagcgatcagagattgttgacttttcagtgccgttcgtggagactgggattagt
gttatggtggccagaagcaatggaacagtctcaccttctgccttcctggagccttacagt
ccagccgtgtgggttatgatgtttgtaatgtgcctgactgttgtggcagtcaccgtgttc
gtgtttgagtacttcagccctgtcggctacaaccggagccttgtcagtgccaaagcccct
gggggtccaacctttaccattgggaagtctgtctggctcctgtggggaatcgtcttcaac
aactctgttcctattgaaaaccccaaaggcacgaccagcaaaattatggtcctggtctgg
gctttttttgctgtcatcttcctcgccagctacacagccaatttagctgccttcatgatc
caagagcagtacattgacactgtgtctggacttagtgacaaaaagtttcaaaaaccccag
gaacattatcctccttttcgctttgggacggtcccaaacggcagcacagagaggaacatt
cgaagcaattaccctgacatgcacacccacatgataaaatacaaccagaagggagtggaa
gaagctctcaacagcctcaagacagggaagttggacgccttcatatatgatgcagcagtt
cttaattatatggctggcaaggatgaggggtgcaagctggtcaccattggtagtgggaag
gtgtttgctaccaccggctacggcattgctctgcagaaggactcccgctggaagcgcccc
atagacctggctctcctccagttcctgggagatggggacacacagagactggagacagta
tggctgtctggaatatgccagaatgagaaaaacgaggtcatgagctccaaactagacata
gacaacatggcaggtgttttctacatgttgctcgtggccatgggcctcagcctgctggtc
tttgcttgggaacatttactttactggaaactgaggcactctgtccacaagtctgatcac
ttagacttcctgctggctattagcaggggcatatacagctgctttaatggcgtcgaagat
attggcagatctaccagcatacagaatccagacatcacagccaattacgcccaggccaac
atgctgaaaatgctgcagacagccaaggacattgtctcctcagccaaagtggaaaactca
ttggataacgccaccaagaccattgagaactggagtcgacacagtggcagcctgccagcg
cgtataccattggtgaccacgactgaaaaacttcctggtcacttctcttacatcactaat
gtcacagagaaccacatacctcacatgcagcgttccataactccacctttcacgcaacac
accaacatttctagcccaccaccaatggtaaaccagagagtcttaacgcggcccactcca
cttcgctacacgcttcctgccaggactaggggtctctatgacggtatgcttcctgtgtcc
agtctgagcacacctcatctagccatgcatgatcctccatccaacctggcccatcctggt
tcttcctttgtcccgtatagagacatctactccgaacaccacaagccttgtcacagcgat
ttttcagatgcggtcaggcggaaaaagagaccccagaatctcttggtagagtccatggat
ctgagggggcttcatgattataaaaaccaatcaacatgtcataacgaagcaaacagtttt
gctgaaaaccacctgacttcatccttcagggaaaatccttttggagccgcagacacagct
tgtaatacctgcgtcaaaacatacttcgaccccacatttgatgacatacctctgataggg
aaaaggaagcttcatcgtagaccttcattcctgaaagccacttggggtcccgacagagtt
cggttcccaggtgacagacccactgccacagcttccccacaagtaactatacccgacctg
ttcccttgcgtggacgtacatggacgggtgaggaacaccctgtgttacacccaaccaatg
gatcacaactaccttcacgccttccggcgaaaccccaggaaaagtcagaagctcagacac
agccagtccacaaggcttccctcctacaaagaagcgattttccacaacgtggcagctgtc
agaagggcatccagtttggtacatagaccctactcctacccagagctgccagtctaccag
agcccactgtcatatggacctgctgaattatgcaacatcttcccatgcatgggacatccc
agtgacagtgtatatggagggtatagggcacccacacaccaacagaatgaccatctagtg
cctgttccaggcagcagggtggttcatagcagtcctgttgtgcccatgacatggggcaga
atttccagtctggaatcagaggtttga
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