Carassius gibelio (silver crucian carp): 127968812
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Entry
127968812 CDS
T08819
Name
(RefSeq) pre-mRNA splicing regulator USH1G-like
KO
K21878
Usher syndrome type-1G protein
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cgib03037
]
127968812
Cilium and associated proteins [BR:
cgib03037
]
Primary cilia and associated proteins
USH complex and associated proteins
127968812
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
Ank_5
SAM_1
Motif
Other DBs
NCBI-GeneID:
127968812
NCBI-ProteinID:
XP_052426130
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Position
B12:complement(1186336..1192823)
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AA seq
490 aa
AA seq
DB search
MNDKYHRAARDGHLHLLKDATRKDLNAPDEDGMTPTLWAAHHGNLDALRLLVARGGDPDK
CDIWGNTPLHLAAANGHLNCLSFLVSFGANVWCLDNDYHTPLDTAASRSRMDCVRYLDTI
AAKQTTINPKLVSKLKDRAFRNAEKRIKNCKKLQHKHHERMEKRFLRESAAMDTSDTMSY
SSFSSTLSRRIPQFNTLDSNMTYSQATLQSTTRGRTKIQRRLEKKKQGDGTFKISEDGRR
SIRSLSGLQLGNDVMFLKQGTYVDRRQQSSPRLNIRNMFSGKQEVRSDDDDDDEVDTVSR
ALSDPGLYEAAYSEISTDSGRDSLFNRPGLGTMVFRRNYVTDGLFRMGENEGSVVGSEPV
GKVPNVRLRGRLPIQSPSLDEVSIGSSLSLHEKNLQDLPWEDGELGLEEEDDEFQPSSAP
LEVFLASQGLSDFLSIFHREQMDLEALLLCSEQDLISIHIPLGPRKKLLDACSRRNSVLD
EADGMQDTVL
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacaaataccaccgggcggctcgagacggtcacctgcacctgctgaaagacgcg
acgcgcaaagatctgaacgcgccggatgaggatgggatgacgccgacgctctgggccgcg
caccacggcaacctggacgcgctcagactgctggtggcgcgaggaggagatcccgataaa
tgtgatatttggggaaacactcctcttcacctggcagcagctaatggccatctcaactgt
ctgtcctttctggtgtcatttggtgccaatgtgtggtgcttggacaatgactaccacacg
ccactggacacggcggcctctaggagccggatggactgtgtgcgatatctggacactatc
gccgccaagcagactaccatcaatcccaaactggtgagcaaactgaaggaccgcgccttc
cgtaatgcagagaaacgcattaagaactgtaaaaagcttcagcacaagcatcacgaacgc
atggagaagcgtttcttgagagagagtgctgcaatggacacgtcggatacaatgagttac
agcagtttcagcagcaccctgagtcgaaggatccctcagttcaacaccctcgactccaac
atgacatactcacaggcaacgcttcagtccacaacaagaggcaggaccaagattcagcgg
cgacttgagaagaaaaagcaaggcgacggaacattcaagatttccgaagatgggcgaagg
agcattcgctcgctctctggtcttcagctgggcaatgacgtcatgttcttgaagcaggga
acatatgtggaccgacgccagcagtccagccctcggcttaacatccgcaacatgttttct
ggtaaacaggaagtcaggtcagacgatgatgatgatgatgaggtagacactgtttcaagg
gcactcagtgatccgggtctgtatgaggctgcatactcggaaataagtacagactcgggt
agagactctttgttcaaccgcccaggactcggtactatggtattccgtcggaattatgtg
actgatgggctgttccgaatgggagagaatgagggcagtgtagtagggagtgaaccagtg
ggaaaggtcccaaatgtccgcttacggggaagattgccgatccagtcacctagtcttgat
gaagtcagcattggcagctcattgagtcttcatgagaagaacttacaggatttgccgtgg
gaggatggagaactgggcttggaggaggaggatgacgagttccagccatcttcggctcct
ttagaagtgttcctggcatctcagggactgagtgacttcctctccatcttccatcgagag
cagatggacctggaagcgttgctgttgtgctctgagcaggaccttattagcatccacatt
ccactcggacctcgtaaaaaactacttgatgcatgcagcagacgcaacagtgttctggac
gaagctgatggcatgcaggacactgtactgtag
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