Carassius gibelio (silver crucian carp): 127968901
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Entry
127968901 CDS
T08819
Name
(RefSeq) transcription factor SOX-8a
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127968901
Transcription factors [BR:
cgib03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127968901
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
127968901
NCBI-ProteinID:
XP_052426276
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All DBs
Position
B12:complement(20593981..20598980)
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AA seq
389 aa
AA seq
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MSKEPDKTPSGTESSYIAHVDSDSPSSPSISDEQGPRSQKGAEEDARFPPCIRDAVSQLL
KGYDWSLVPMPMQGSRSLKDKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGK
LWRLLSESEKRPFVEEAERLRLQHKKDYPDYKYQPRRRKSLKPGQSELDTGAEENPHASD
HMYKVEAGVRGMHHQQLHGAQPHGPPTPPTTPKSDQHQNPKQESRRASDNTRHNIDFSNL
DISELSSDVIGGMGSFDVREFDQYLPLNGHTENPSGCFGTPYHHHPHSSASAWNKGSPNQ
QRPLIKTEQLSPSHYGESHGSPTQSELTDCPDLQNSTYFTTFSGYPAGIYQYPYFHSSRR
SYVTPVITSPSHSPGASWEQPVYTTLTRP
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagagccggataaaactccttctgggactgaaagctcttatatcgcccatgtg
gactctgattcgccgtcttctccatcgatatccgacgaacaaggcccgcggtcccaaaaa
ggcgccgaggaggatgcccgtttccccccgtgcatccgagacgcggtgtcccagctcctc
aaaggctatgactggtcgctggtgccgatgcctatgcagggcagcaggtctctgaaagac
aagcctcatgtgaagagacccatgaacgcgtttatggtgtgggcgcaggcggcgcgcagg
aagctcgcggatcagtatccacatctccacaacgccgagctcagcaagaccctcggcaag
ctatggaggctgctctctgagagcgagaaacgaccgtttgtggaagaggcagagagactg
cggctccagcacaagaaagactatccggattataaataccagccgcgaagacggaagagc
ctgaagccgggtcagagtgagctggacacgggagctgaggagaaccctcacgcctcggat
cacatgtataaagtagaagccggtgtgagagggatgcaccatcaacagctccacggtgct
caacctcacggtcctcctacaccccccaccaccccgaagtctgatcagcatcagaacccc
aaacaggagtcccggcgtgcatcggataacaccagacacaacatcgacttcagcaacctg
gacatctcggagctcagcagtgatgtcatcggcggcatgggctcgtttgacgtgcgtgag
ttcgaccagtacctgccgttaaacggtcacacggagaaccccagcggctgtttcggcaca
ccctaccaccatcatcctcacagcagcgcttcggcatggaacaaggggtcaccgaaccaa
caaagaccgctcattaaaacagaacaattgagtccttctcattacggagagtctcacggg
tcaccgacccaatccgaactgactgactgtccagacctgcagaactccacgtacttcacc
acattctccgggtatcccgctggcatttatcaatacccgtacttccactcctccagaaga
tcgtacgtgactcccgttatcacgagtccgtctcatagtcccggggcgagctgggagcag
ccggtttacaccactttaacacgaccctga
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