Carassius gibelio (silver crucian carp): 127968920
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Entry
127968920 CDS
T08819
Name
(RefSeq) protein transport protein Sec24C isoform X1
KO
K14007
protein transport protein SEC24
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127968920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127968920
Membrane trafficking [BR:
cgib04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
127968920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
127968920
NCBI-ProteinID:
XP_052426309
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All DBs
Position
B12:5461553..5479090
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AA seq
1234 aa
AA seq
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MNVNQQPHMASPYGQPQPGYQGYPQPGYGGDNVPSGYPAQYAPYNGPGSAYQQGPPQGYS
PYASFPSKTLTTNLVSDLSSSSPLDLGMRGPPTSGAPPVSGAQNYSQFGQGETQNGPPPM
VAPPQRPPVSQPYTPAAVNLPGPQPTYGQQYGAPPVSMQQMTNQMASMQVGSTAPSPAGP
GYAPQSFPQAPPVSQPPFSTAQVQPGPTQSYGRPLPSTQPSFPRPPLPTSQPSAFPAGPP
PTSTPSQLPGVIQPQPPVSQPPPYHSGPPPTSTGFPPRPPFHGMQGLPMTSQGPPMASQG
PPMASQGPPMASQGPPMGSQGPPMASQGPPMGSQGPPMASQGPQMGSQGPPMGSQGPPMA
QANHILPTQPGMPPGPINTSLSGPPPQPGMQGYPAQQNGAFGQVRGPQPGYTGPYPGQQN
YGAPSTAPAPAPAAPKRLDPDSIPSPQASDMPPVQKTRHRIDPDAIPSPIQVIEDDKANK
GSEPFTTGVRGQAPPLVTTKFQVKDQGNASPRYIRCTSYNMPCNSDMAKQSQVPLAAVIK
PLAPLPPDETPPYLVDHGESGPIRCNRCKAYMCPYMQFIEGGRRFQCGFCSCVTEVPPHY
FQHLDHTGKRVDCYDRPELSMGSYEFMTTVDYCKNNKFPQPPAFIFLIDVSYNAVKNGMV
GIVCQELKTLLDYLPRENPDVESNIRVGFVTYNKVLHFYNVKASLAQPQMMVVSDVADMF
VPLLDGFLVNVSESRVVIESLLDQIPEMFADTRETETVFGPVIQAGLEALKAADCAGKLF
VFHSSLPIAEAPGKLKNREDKKLVGTDKEKSLFQPQVSFYNTLAKECVAQGCCVDLFLFP
NQYVDVATLGVVPTSTGGSIYKYTYFQAPSDQERFLNDLRRDVQKQMGFDAVMRVRTSTG
IRVTDFFGSFFMSNTTDVELAGLDCDKTVTVEFKHDDKLSEETGALMQCAVLYTSCSGQR
RLRIHNMAVNCCSQLADLYRNCETDTIINYFAKYAYRSILSSPTKNVRDSLMNQCAQILA
CYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLQPGADVSLDDRAYLRQLVSTMDV
AESHVFFYPRLLPLQKLDVESMTLPMAVRDSEERLSRGGVYLLENGLNIFLWVGVSAQQE
LLQNIFGTPAFSQIDSNMTSLPALDNPFSKSLREIIESVRAQRSRYMKLMVVKQEDKLEL
IFKHFLVEDKNNNGGASYVDFLCHMHKEIRQLLS
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcaaccagcaacctcacatggcctctccttatgggcagcctcagcctgggtat
cagggctacccccagccagggtatgggggtgacaacgtgccatcgggatatccggctcag
tatgcaccttataatgggccgggctctgcctaccaacaaggtccaccccaaggatattct
ccttatgcaagctttccctctaagactctcacaacaaacttagtctctgacctgtcctcc
tcctctcctcttgatctaggtatgagaggaccccccacctcaggggcaccacctgtctca
ggtgcccagaactattctcagtttgggcaaggagaaactcagaatggaccaccaccaatg
gttgctccaccacagaggcctccagtgtctcaaccttacactccagctgcagtgaatctg
cctggtcctcaacccacgtacggccagcagtacggagctccacctgtcagcatgcaacag
atgaccaatcagatggccagcatgcaggttggctccactgcaccctcccctgcaggccca
ggctatgccccacagtccttccctcaagctccccctgtctctcagcctcctttttccaca
gcccaggtacaacccggtcccacccagtcatacggacgcccacttccttcaacgcagccc
tctttcccaagaccaccacttcccacctcccagccctctgcattccctgcaggtccacca
cccacctcgactccatctcagctcccaggtgtcatccaaccccaaccgccagtttcccaa
cccccaccttaccactcaggtccccctccaacctctactgggtttccaccacggcctccc
tttcatggaatgcagggccttcctatgacatcacagggtcctccaatggcgtcacagggt
cctccaatggcgtcacagggtcctccaatggcgtcacaaggtcctccaatgggatcacaa
ggtcctccaatggcatcacagggtcctccaatgggatcacaaggtcctccaatggcgtca
caagggcctcaaatgggatcacaagggcctccaatgggatcacaagggcctccaatggca
caggctaatcatatactccctacacaacctggcatgccacctggtcctatcaacacctcc
ctgtcagggccaccaccacagcctggaatgcagggatatcctgctcagcaaaatggtgct
tttgggcaggtcagaggtcctcagcctggttacacaggaccatatcctggacagcaaaac
tatggagcgccatccacagcacctgctccggcaccagctgccccaaagaggcttgatcct
gattctatcccaagcccgcaagcctctgacatgccgcctgtgcagaaaacaagacataga
atagacccagacgcaatcccaagtccaattcaggttatcgaggatgacaaagcaaacaag
ggaagtgaaccttttactacaggggtcagaggtcaagccccacctcttgtcaccaccaaa
ttccaagttaaagatcaagggaatgctagtccacgctacatccgttgtacatcctacaac
atgccctgcaattccgacatggccaaacagtcccaggttcccctggcggctgtcattaaa
cccctggcccctctgcctccagatgagacaccaccatatctcgtggatcatggagaaagt
ggtcccatccgctgtaatcgctgtaaggcctatatgtgcccgtacatgcagtttatcgaa
ggtggccgtcgtttccagtgtggcttctgcagctgtgtcaccgaggtgcctccccattac
ttccagcatctggatcacacagggaagagggtggactgctatgatcgtccagagctctcg
atgggcagttatgagtttatgactactgtggactactgtaagaacaacaagtttcctcag
ccgccagccttcatcttcctgattgatgtgtcctacaatgctgtgaagaatggcatggtg
ggaattgtatgtcaggagctgaagacactgttggattacttgccaagagagaaccctgat
gtggaatcaaacattcgagttggcttcgtcacctacaataaagtgcttcatttctacaat
gtgaaggcctcccttgcccagccccagatgatggtcgtgtcagatgtggctgacatgttt
gtgcccctactggatggatttctggtcaatgtctcagagtccagggtggttattgagagt
ttgttggatcagatccccgagatgtttgcagacacaagggaaacggaaactgtgtttggg
cctgtcattcaggctgggctggaagcgctcaaggctgcagactgtgctggaaagcttttt
gttttccactcatctcttcccatcgctgaggctccaggcaaactgaagaacagggaagat
aagaaactagttggaactgataaagaaaagtcattattccagccacaagttagtttttac
aacacccttgccaaggagtgtgttgcacagggttgctgtgtggacctcttcctctttccc
aaccagtatgttgacgtagcaacattaggggtggtccccacttcaacgggcggctccatc
tacaaatacacctacttccaggctccatctgaccaggagcgttttcttaatgacctgagg
agagatgtgcagaagcagatgggctttgatgcagtgatgagggtccgcaccagcacaggt
atccgggtgaccgacttctttggttccttcttcatgagcaacaccaccgatgtagagctg
gcaggactagactgtgacaagactgtaaccgtggagttcaaacatgatgacaagctcagc
gaggagactggagctctaatgcagtgtgcagtcctgtacaccagctgcagtggtcagcga
cgacttcggatccataacatggcagtgaactgctgctctcagctggcagacctgtacagg
aactgtgagactgacaccatcatcaactactttgccaaatatgcgtatcggagtatactc
agcagtcctaccaagaatgtccgtgatagtctgatgaatcagtgtgcacagatcttagcc
tgttaccgcaagaactgtgccagtccatcttcagcagggcagttgattttaccagaatgt
atgaagttgctgcctgtgtacctgaactgcgtgttgaagagtgacgttctgcagcccggg
gcggacgtctccctggatgaccgtgcctacctgagacagctggtcagcactatggatgtg
gccgagagccatgtgtttttctaccctcgtctgcttccgctgcaaaagctggatgttgag
agcatgactctgcctatggcagtgagagactcggaggagagactgtctaggggaggagtt
tacctgttagagaacggactgaatattttcctttgggtgggggtcagtgcccaacaggag
ctgcttcagaacatctttggcacgccggccttcagccagatagactctaacatgacctct
ctgccagctttggataatcctttttcaaagagcctaagggagattatcgagtccgtcagg
gcacagcgctcacgatacatgaagctcatggtggtgaaacaggaagacaagctggagctg
atcttcaagcacttcctggtggaggataagaacaacaatggaggggcctcttacgtggac
ttcctgtgtcacatgcacaaggagattcgtcagctcctgagctag
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