Carassius gibelio (silver crucian carp): 127969022
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Entry
127969022 CDS
T08819
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 3
KO
K22991
WD repeat-containing protein 45
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127969022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127969022
Membrane trafficking [BR:
cgib04131
]
Autophagy
Other autophagy associated proteins
Others
127969022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_Vps41
ANAPC4_WD40
WD40
WD40_Prp19
BCAS3_WD40
Beta-prop_IFT122_2nd
WDR55
EIF3I
Beta-prop_WDR35_TULP_N
Beta-prop_EML
Beta-prop_IFT140_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_DCAF12
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
DUF5711
DUF1513
Motif
Other DBs
NCBI-GeneID:
127969022
NCBI-ProteinID:
XP_052426536
LinkDB
All DBs
Position
B12:19521526..19527040
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AA seq
344 aa
AA seq
DB search
MDLLPSNPHGNGLLYAGFNQDHGCFACGMENGFRVYNTDPLKEKEKQEFLEGGVGHVEML
FRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDSMI
KVFTFTHNPHQLHVFETCYNPKGLCVLCPNSNNSLLAFPATHSGHVQIVDLANTEKPPVD
IPAHEGALCCIALNLQGTRIATASEKGTLIRIFDTSAGQLIQELRRGSQTANIYCINFNQ
DASLICVSSDHGTVHIFAAEDPKRNKQSSLASASFLPKYFSSKWSFSKFQVPSGSPCVCA
FGTEPNAVIAICADGSYYKFLFNQKGECSRDVYAQFLEMTDEKI
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggatttattaccatcaaatccccacggcaatggactactttatgctggatttaaccag
gatcacggatgttttgcatgtggaatggaaaatggattcagggtgtataacacagatcct
ctcaaagaaaaggaaaaacaagagtttcttgagggaggagttggtcacgtggagatgctt
tttcgatgcaattatcttgcgcttgtaggaggtgggaaaaaaccaaagtaccctcccaat
aaagtgatgatttgggatgacctgaagaaaaagactgtgatagagattgagttttccaca
gaggtcaaagccgttaagcttcgccgtgacagaattgtggtggtcctggactccatgatt
aaagtgttcacatttactcataatcctcatcagctgcatgtctttgaaacatgctataac
cctaaaggtttgtgtgtcttgtgcccaaacagcaacaattcattgctagcgtttccagcc
actcactccggacacgttcagatcgtagatctggccaatacagagaaacctcctgtggat
attcctgcacatgaaggagctctgtgctgcatcgctctcaatcttcagggcacacggata
gccacggcgtctgaaaaagggaccctgatcagaatattcgacacctcagcaggtcaactt
attcaggagctgagaagaggatcgcaaactgccaatatatactgcatcaatttcaaccaa
gatgcctctcttatctgcgtatcgagtgaccatggcacagtccacatatttgctgccgag
gatcccaaaaggaacaagcagtccagcttggcatcggccagttttctccccaagtatttc
agctccaagtggagtttctccaagttccaggtcccatccggttcgccctgcgtctgtgcc
tttggaacagaacccaacgctgtcatagctatttgtgctgatggcagctactacaagttt
ctgttcaaccaaaaaggggagtgttcaagggatgtttatgctcagtttctggaaatgact
gacgagaagatctga
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integrated database retrieval system
