Carassius gibelio (silver crucian carp): 127969116
Help
Entry
127969116 CDS
T08819
Name
(RefSeq) pseudouridylate synthase TRUB1-like
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgib03016
]
127969116
Enzymes [BR:
cgib01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
127969116
Transfer RNA biogenesis [BR:
cgib03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
127969116
Prokaryotic type
127969116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
FlpD
Motif
Other DBs
NCBI-GeneID:
127969116
NCBI-ProteinID:
XP_052426783
LinkDB
All DBs
Position
B12:8130769..8134706
Genome browser
AA seq
274 aa
AA seq
DB search
MAAQSSSLSKLQSLNGIFAIYKKQGPTSADVLNALKKVLLKEAGIANPNPRKRKKQPLKI
GHGGTLDSNASGVLVVGIGEGTKMLTTMLAGSKKYRAVGELGKATDTLDVTGNVVEEKSY
DHITKEAFEEKMKQFTGEIMQVPPLYSALKKDGQRMSVLLKQGQEVEAKPARPVTVYSLS
LQDFSPPYFTIDVECGGGFYVRSLVDDLAKALSSCAHIKHLTRTKQGQFMLEEHALKEDR
WTWTDISQALQPCPTQSGLQNNAKKAKSKHKPTI
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacagagcagttcgctatccaaattgcagtctttaaatggtatatttgccatt
tataagaaacagggtcccacctccgcggatgtgttaaacgcactgaagaaggtgctttta
aaagaggcaggaattgcaaatcccaatcctcgcaagaggaagaagcaacctttaaaaatt
ggccatggtggcaccctggacagcaatgcttctggtgtacttgtggttggaattggtgaa
ggaacaaagatgctcaccacgatgcttgcaggatcaaagaaatacagagctgttggagag
ttaggcaaagcaactgatacgcttgacgtcacaggaaatgttgttgaagagaagagttat
gatcacataacaaaagaggcttttgaggagaagatgaagcaattcacgggtgaaattatg
caggttccacctctatattcagcactgaagaaggatggccagcgcatgtctgtcctgctc
aagcaaggtcaagaggtggaggctaaacctgcacgtccagtcacagtgtacagtctctct
ttacaggacttcagcccgccgtatttcaccatagatgttgagtgtggaggtggattttat
gtaagaagcttggttgatgatcttgcaaaagctctgtcctcctgtgctcacatcaagcat
ctcactcggaccaagcagggtcagttcatgcttgaagagcacgcattgaaggaggatcgc
tggacatggacagatatctcacaggctctgcagccctgcccaacacaatcagggctacaa
aataatgccaagaaagctaaatcaaagcataaacctaccatctga
DBGET
integrated database retrieval system
