Carassius gibelio (silver crucian carp): 127969167
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Entry
127969167 CDS
T08819
Name
(RefSeq) integrin alpha-X-like
KO
K06461
integrin alpha M
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04145
Phagosome
cgib04514
Cell adhesion molecule (CAM) interaction
cgib04517
IgSF CAM signaling
cgib04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
127969167
04517 IgSF CAM signaling
127969167
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127969167
09142 Cell motility
04810 Regulation of actin cytoskeleton
127969167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127969167
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgib04147
]
127969167
04515 Cell adhesion molecules [BR:
cgib04515
]
127969167
04090 CD molecules [BR:
cgib04090
]
127969167
00536 Glycosaminoglycan binding proteins [BR:
cgib00536
]
127969167
Membrane trafficking [BR:
cgib04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
127969167
Exosome [BR:
cgib04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127969167
Cell adhesion molecules [BR:
cgib04515
]
Integrins
Integrin alpha subunits
127969167
CD molecules [BR:
cgib04090
]
Proteins
127969167
Glycosaminoglycan binding proteins [BR:
cgib00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
127969167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
Integrin_A_Ig_2
FG-GAP
VWA_2
Integrin_A_Ig_1
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
127969167
NCBI-ProteinID:
XP_052426899
LinkDB
All DBs
Position
B12:complement(19409971..19453226)
Genome browser
AA seq
1126 aa
AA seq
DB search
MEWNFQLPLYLFYVCHSLMAFNIDPVTWKTFTSNENTGFGYKVIQKGASLLVSDPLIQHS
QTRRGKIYDCSVTTGKCVTLAIAVPDEAVNMSLGLSMSLDPQSSRAVVCGPTIPKNCDVT
TYNGMCFKISSGNVVSKSVPRTLRECPTSKIDIAFLMDGSGSVHDVDFNKMKVFVIEMIK
SFIDHDTQFAIAQFSTYCQIHYKFQQVKNAKAWEDAVTQIRQLKEWTYTATAIEKLVKEL
FVSQGGARPSASKILVVITDGESTDDFLREAIKKAQEKDITRYAIGVGNAFNNDKAATEL
AIIASLPTNKHVFKVTDFDALESIREQLKENIIAIEGTQTTGDSSRMEFAQDGFSAALTS
NTDIMMTAVGAFQWKGGYQLYKQNDQSNVFQAGSEHDSYLGYSLTIATVFGTKYAVMGAP
RHKHKGQVTVSRIDNIPRTLKELDPPKPQIGSYFGAEVCVVDLNRFSRTVLLLVSAPTYM
EPDREGKVFVYTFSRRSYFVFSGLELVGTTDQRGRFGSSLASPADLNGDGYMDVLIGAPL
EEDGQGSIYIFNGGEYQINPTYSQRIAGSSVRPGLRFFGISLSQSSLDQSTDSLPDIAVG
AMGAVLLLRSRPVMQLKTKVTYNPSKIPTGETVQPLKNTMKVCFTMSPYRHSVKGLTANI
NYTIILDAKRQKYRAYFSPKNRISNDLMNIRLNEETCKSHSFFIDAFSEDALNPLSNQLT
FTFEGLPSAKLQNITPILLPGIKTTTDHNLDFEISCGHDDICVDDLRMDFSFSGSTIEVG
IMQEINVTVFVENRGENSYNTFFTFSYPFGLSYRRIISKQGRVECVSLDSEKNGSFGETT
CHISKPILKGNSQVVFHITYSISKENTFDQNVRFTARINSGNDQHSQTSELFKEKSIDVK
YAIYIALIRHENSTLHINFTAQNSDANKPVKQILKVENDFRELGFQVFIRVPVMLGNKSI
WANNDIQIPGCVKQKDEQPAVTDFVEVIKKDFVVNCSVALCAKFRCDCTLLKNERKFYNI
TGNVSSGWIEQTGLRAAVFQLVSSASIDYDKKIYVFFSSDSQQTASSAQIDTQVEVYDEV
NLTKEIAGGAIGGLLLLALITGALYKAGFFKSHYKQLLENAEQSPE
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggagtggaatttccagttgcctttgtatttgttttatgtatgccattcattaatggcc
ttcaacattgatcctgtgacctggaagaccttcacaagcaatgaaaacactggctttggc
tataaagtgatacagaaaggtgcaagtctgcttgtgagtgatcctttaatacaacacagt
caaactcgaagaggaaaaatttatgactgttctgtcaccacaggaaagtgcgtgacactg
gccattgctgtcccggatgaagctgtcaacatgtcccttggactttcaatgtctctagat
cctcagtcttcgagagcagtggtttgtggtccaaccatacctaagaactgtgatgtaacc
acttacaacggcatgtgctttaaaatcagttcaggcaatgttgtaagcaaatctgtgcca
aggactctgagagaatgcccaacatccaaaattgatattgcttttttaatggatggatct
ggaagtgtacatgatgtggattttaataagatgaaggtttttgttatagaaatgatcaaa
agttttatagaccatgatacacagtttgccatagcacagttttctacatattgtcaaatt
cattacaagtttcaacaagtaaaaaatgccaaagcatgggaagatgcagtgactcagata
cgtcaactgaaggaatggacttatactgcaacagctatagaaaaacttgtgaaagagcta
tttgttagtcagggaggtgcaagaccatcagccagcaaaattctggttgttatcacagat
ggtgaatcaactgatgatttcttgagagaagccattaaaaaagcacaagaaaaagatata
acacgatatgctattggggttggcaatgcttttaataatgacaaagcagcaacggagctg
gcaattattgcatctttacccaccaataagcatgttttcaaagtaactgactttgacgcg
ctggaaagtattcgtgagcaactcaaagagaatattattgccattgaaggaacccagacc
actggtgattcatctcggatggagtttgcacaggacgggtttagtgcagcattaacatca
aatacagatataatgatgactgcagtgggagctttccagtggaagggtggatatcagctg
tacaaacaaaatgatcagtcaaatgtctttcaagctggaagtgagcatgacagttattta
ggttattccttaacaatagcgacagtgtttggaacaaagtatgcagtcatgggagcacca
agacacaagcacaagggacaagtaactgtttcaagaattgataatattccaaggacttta
aaagaactggatcctcctaagcctcagattggctcatattttggagctgaggtttgtgtg
gtggatttgaacaggttctcgagaacagtcctcctgttggtatcggcaccaacatacatg
gagcctgaccgggagggcaaagtgtttgtttacaccttcagtcgccggtcgtactttgtt
ttttcgggtttggagctggtgggaacgacagatcagaggggtcggtttggctcttctctg
gccagtccagcagatctgaatggtgatggttacatggatgtgctaatcggagctccttta
gaggaggacggacaaggcagcatctacatcttcaatggtggagaatatcaaataaatccc
acatattcacagaggattgctgggtcatctgtgagaccaggtttgcggttctttgggatt
tcgttgagtcagtcctctctagaccagagtacagacagccttcctgatattgctgttggg
gccatgggagcagttctgctactcaggtccagaccagtcatgcaactgaaaaccaaagta
acttacaacccatccaaaataccaaccggtgaaacagtgcagccactgaaaaacaccatg
aaagtgtgcttcaccatgagtccatacagacacagcgtaaaaggcttaacagcaaatatt
aattacaccataattctggatgccaagcgacagaaatatcgagcatatttctcacccaaa
aaccgcatctccaatgatttgatgaacattagactaaatgaagaaacttgcaaaagtcat
tctttcttcatagacgctttctcagaagatgctctgaacccattgtccaatcaattaaca
ttcacttttgagggtctaccatctgccaaactgcaaaacataacgccaatactgctgccg
gggataaagaccaccacagaccacaatctggactttgagataagctgtggacatgatgac
atttgtgtggatgacctcaggatggatttcagtttctctggatctacaatagaagttgga
atcatgcaggagatcaatgtgacagtgtttgtagaaaacagaggagaaaactcatacaac
acattcttcaccttcagctacccctttggactttcctacaggagaatcatatctaaacag
ggcagagtggagtgtgtatctcttgacagtgagaaaaatggttcatttggagagaccacc
tgccacatcagcaaacccatccttaaaggaaactctcaggttgtgtttcatattacatac
agcatcagtaaagaaaacaccttcgatcaaaacgtgaggtttactgctagaatcaacagt
gggaatgaccaacactctcaaaccagtgaacttttcaaagagaaaagcattgatgtaaaa
tatgccatctatattgccttaataaggcatgaaaattcaaccctccacatcaattttact
gcacagaattctgatgctaataaaccagtcaaacagatactaaaggttgaaaatgacttt
agagaactaggtttccaagttttcatcagagtgccagtgatgttgggaaacaaatctatc
tgggctaataatgacatacagattccaggctgtgttaaacagaaggatgagcagcctgcc
gtaactgattttgttgaagtaattaaaaaggattttgtggtgaactgctctgtggcgctg
tgtgccaagttcagatgtgattgcactcttttaaagaatgaacggaaattttataatatt
actggcaatgtgagctctggatggattgagcagactggactcagagctgctgtttttcag
ctggttagttcagcatctattgattatgacaagaaaatatatgttttcttttcctccgat
tctcaacaaactgcatcgtccgctcagattgatactcaagtggaggtgtatgatgaggtg
aatctgactaaagagatcgctggaggtgcaataggaggactgctgctactggctctcatc
acaggggccctctataaggctggcttcttcaaaagccactacaagcagctgctagagaat
gcagaacaaagccctgaatag
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